RNA–Protein interactions for RNA: ENST00000475591.5

UBXN11-214, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,542 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-214ENST00000475591 CST7O76096 145 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 DANCRP0C864 163 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 VDAC1P21796 283 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 ZNF497Q6ZNH5 498 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 TMEM182Q6ZP80 229 aaPredicted RBP11.91□□□□□ -0.5
UBXN11-214ENST00000475591 TMEM217Q8N7C4 229 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 SEC11CQ9BY50 192 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 OBP2BQ9NPH6 170 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 PPP1R3CQ9UQK1 317 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 GTF3C1Q12789 2109 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 IQCF6A8MYZ5 107 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 TOR1AO14656 332 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 CD5P06127 495 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 SEC11BP0C7V7 166 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 RAC2P15153 192 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 INO80CQ6PI98 192 aaPredicted RBP11.91□□□□□ -0.5
UBXN11-214ENST00000475591 IGFL2Q6UWQ7 119 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 CLRN3Q8NCR9 226 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 OR10V1Q8NGI7 309 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 OR5D13Q8NGL4 314 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 TAAR6Q96RI8 345 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 POLDIP2Q9Y2S7 368 aa11.91□□□□□ -0.5
UBXN11-214ENST00000475591 CNOT1A5YKK6 2376 aaKnown RBP11.9□□□□□ -0.5
UBXN11-214ENST00000475591 TRAV17A0A0B4J275 112 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 MEX3AA1L020 520 aaKnown RBP11.9□□□□□ -0.5
UBXN11-214ENST00000475591 FAM157AC9JC47 383 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 ATP6V1G2-DDX39BF2Z307 99 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 PSPNO60542 156 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 CAMLGP49069 296 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 TMEM252Q8N6L7 170 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 LYPD6BQ8NI32 183 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 SPIN2AQ99865 258 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 SPIN2BQ9BPZ2 258 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 CACFD1Q9UGQ2 172 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 PURGQ9UJV8 347 aaKnown RBP11.9□□□□□ -0.5
UBXN11-214ENST00000475591 PCP4L1A6NKN8 68 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 H3BP45 60 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 AQP7O14520 342 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 HSPA12AO43301 675 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 CHST1O43916 411 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 TSPAN15O95858 294 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 IGKV1-39P01597 117 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 PRH1P02810 166 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 IGKV1D-39P04432 117 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 PRAMEF6Q5VXH4 476 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 Q6ZRM9 215 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 GPR146Q96CH1 333 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 AKR1E2Q96JD6 320 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 ABHD14AQ9BUJ0 271 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 OPN3Q9H1Y3 402 aaPredicted RBP11.9□□□□□ -0.5
UBXN11-214ENST00000475591 LYRM2Q9NU23 88 aaPredicted RBP11.9□□□□□ -0.5
UBXN11-214ENST00000475591 KCNS2Q9ULS6 477 aa11.9□□□□□ -0.5
UBXN11-214ENST00000475591 J3QW42 95 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 WDR1O75083 606 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 IGKV3-15P01624 115 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 ZNF16P17020 682 aaPredicted RBP11.89□□□□□ -0.51
UBXN11-214ENST00000475591 FABP6P51161 128 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 DYNLT3P51808 116 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 VAMP2P63027 116 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 ID3Q02535 119 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 ETV3LQ6ZN32 361 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 OR5C1Q8NGR4 320 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 MSL2Q9HCI7 577 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 UFSP2Q9NUQ7 469 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 RBM7Q9Y580 266 aaKnown RBP11.89□□□□□ -0.51
UBXN11-214ENST00000475591 CLEC18AA5D8T8 446 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 HAND1O96004 215 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 SERPINE2P07093 398 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 CECR9P0C854 216 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 CBR1P16152 277 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 PVALBP20472 110 aaPredicted RBP11.89□□□□□ -0.51
UBXN11-214ENST00000475591 COX5AP20674 150 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 HOXC12P31275 282 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 PPT1P50897 306 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 PAX9P55771 341 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 ZNF146Q15072 292 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 ACSF3Q4G176 576 aaPredicted RBP11.89□□□□□ -0.51
UBXN11-214ENST00000475591 AKIRIN2Q53H80 203 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 ALKBH2Q6NS38 261 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 C11orf53Q8IXP5 236 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 Q8IYB0 196 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 SPAG16Q8N0X2 631 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 ZNF610Q8N9Z0 462 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 CLEC18CQ8NCF0 446 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 PLEKHF2Q9H8W4 249 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 C19orf12Q9NSK7 152 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 KIAA2026Q5HYC2 2103 aa11.89□□□□□ -0.51
UBXN11-214ENST00000475591 SH2D1BO14796 132 aa11.88□□□□□ -0.51
UBXN11-214ENST00000475591 ATP6V0CP27449 155 aa11.88□□□□□ -0.51
UBXN11-214ENST00000475591 PPP1CCP36873 323 aaKnown RBP11.88□□□□□ -0.51
UBXN11-214ENST00000475591 SNCAP37840 140 aa11.88□□□□□ -0.51
UBXN11-214ENST00000475591 DVL1P1P54792 670 aaPredicted RBP11.88□□□□□ -0.51
UBXN11-214ENST00000475591 Q6ZR03 302 aa11.88□□□□□ -0.51
UBXN11-214ENST00000475591 ZNF295-AS1Q8N0V1 137 aa11.88□□□□□ -0.51
UBXN11-214ENST00000475591 FAM213BQ8TBF2 198 aa11.88□□□□□ -0.51
UBXN11-214ENST00000475591 LUZP4Q9P127 313 aa11.88□□□□□ -0.51
UBXN11-214ENST00000475591 DKK4Q9UBT3 224 aa11.88□□□□□ -0.51
UBXN11-214ENST00000475591 RNF115Q9Y4L5 304 aa11.88□□□□□ -0.51
UBXN11-214ENST00000475591 AKAP13Q12802 2813 aa11.88□□□□□ -0.51
UBXN11-214ENST00000475591 A6NLC8 198 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms