RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 VAX1Q5SQQ9 334 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 ATAD3CQ5T2N8 411 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 SYT6Q5T7P8 510 aaPredicted RBP5.51□□□□□ -1.53
HDAC3-207ENST00000475549 TMPRSS11AQ6ZMR5 421 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 SLC35E3Q7Z769 313 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 IZUMO1Q8IYV9 350 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 OR8H3Q8N146 312 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 GAPTQ8N292 157 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 OR52M1Q8NGK5 317 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 OR10X1Q8NGY0 326 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 CHPT1Q8WUD6 406 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 RTN4IP1Q8WWV3 396 aaPredicted RBP5.51□□□□□ -1.53
HDAC3-207ENST00000475549 RAX2Q96IS3 184 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 OR14A2Q96R54 314 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 HSPB9Q9BQS6 159 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 ABCG5Q9H222 651 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 DCLRE1BQ9H816 532 aa5.51□□□□□ -1.53
HDAC3-207ENST00000475549 SMPD3Q9NY59 655 aaPredicted RBP5.51□□□□□ -1.53
HDAC3-207ENST00000475549 DNAH9Q9NYC9 4486 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 NCBP2LA6PVI3 153 aaKnown RBP5.5□□□□□ -1.53
HDAC3-207ENST00000475549 H0YHG0 523 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 AIPO00170 330 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 DUS4LO95620 317 aaKnown RBP5.5□□□□□ -1.53
HDAC3-207ENST00000475549 BAG2O95816 211 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 CSTBP04080 98 aaKnown RBP5.5□□□□□ -1.53
HDAC3-207ENST00000475549 MAS1P04201 325 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 CD2P06729 351 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 CD1BP29016 333 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 MYCNOSP40205 109 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 PPP3R1P63098 170 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 ST3GAL4Q11206 333 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 KIAA0141Q14154 515 aaPredicted RBP5.5□□□□□ -1.53
HDAC3-207ENST00000475549 INSL4Q14641 139 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 LRRC36Q1X8D7 754 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 MPV17LQ2QL34 196 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 DEFB136Q30KP8 78 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 Q499Y3 187 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 YIF1BQ5BJH7 314 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 GLIPR1L1Q6UWM5 242 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 SLC25A48Q6ZT89 311 aaKnown RBP5.5□□□□□ -1.53
HDAC3-207ENST00000475549 LINC00596Q86U02 117 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 TGIF2LXQ8IUE1 241 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 ZNF695Q8IW36 515 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 ODF3L1Q8IXM7 274 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 FAM71E2Q8N5Q1 922 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 RNF152Q8N8N0 203 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 KLHL30-AS1Q8NEE0 82 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 OR10V1Q8NGI7 309 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 OR4K15Q8NH41 348 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 OR1L1Q8NH94 360 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 MUL1Q969V5 352 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 CPNE2Q96FN4 548 aaPredicted RBP5.5□□□□□ -1.53
HDAC3-207ENST00000475549 TMEM80Q96HE8 168 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 RDH12Q96NR8 316 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 S1PR3Q99500 378 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 BANF2Q9H503 90 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 ZFP57Q9NU63 452 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 LIN7CQ9NUP9 197 aaKnown RBP5.5□□□□□ -1.53
HDAC3-207ENST00000475549 SCOCQ9UIL1 159 aa5.5□□□□□ -1.53
HDAC3-207ENST00000475549 PNMA8CA0A1B0GUJ8 204 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 CCL24O00175 119 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 ZNF780AO75290 641 aaPredicted RBP5.49□□□□□ -1.53
HDAC3-207ENST00000475549 SC5DO75845 299 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 MOSP00540 346 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 HBZP02008 142 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 VSIG8P0DPA2 414 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 SNRPBP14678 240 aaKnown RBP5.49□□□□□ -1.53
HDAC3-207ENST00000475549 FSTP19883 344 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 LUMP51884 338 aaPredicted RBP5.49□□□□□ -1.53
HDAC3-207ENST00000475549 ZNF137PP52743 207 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 GNMTQ14749 295 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 PNLIPRP3Q17RR3 467 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 Q3ZCU0 254 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 MORN2Q502X0 79 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 KIAA2026Q5HYC2 2103 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 RAB12Q6IQ22 244 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 TEX38Q6PEX7 206 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 FOXRED2Q8IWF2 684 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 C10orf67Q8IYJ2 551 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 COMMD1Q8N668 190 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 ZNF555Q8NEP9 628 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 OR52L2PQ8NGH6 319 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 OR2T10Q8NGZ9 312 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 MRPL30Q8TCC3 161 aaKnown RBP5.49□□□□□ -1.53
HDAC3-207ENST00000475549 NEK7Q8TDX7 302 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 FBLIM1Q8WUP2 373 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 CYGBQ8WWM9 190 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 DERL3Q96Q80 235 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 KLK15Q9H2R5 256 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 PAK1IP1Q9NWT1 392 aaPredicted RBP5.49□□□□□ -1.53
HDAC3-207ENST00000475549 ETAA1Q9NY74 926 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 PSORS1C1Q9UIG5 152 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 MRPS28Q9Y2Q9 187 aaKnown RBP5.49□□□□□ -1.53
HDAC3-207ENST00000475549 EXOSC1Q9Y3B2 195 aaKnown RBP5.49□□□□□ -1.53
HDAC3-207ENST00000475549 PEX16Q9Y5Y5 336 aa5.49□□□□□ -1.53
HDAC3-207ENST00000475549 UBE2QL1A1L167 161 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 NUDT19A8MXV4 375 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 MCRIP1C9JLW8 97 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 AP4M1O00189 453 aa5.48□□□□□ -1.53
HDAC3-207ENST00000475549 IGF1P05019 195 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms