RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 ETAA1Q9NY74 926 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 IL36RNQ9UBH0 155 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 SCP2D1Q9UJQ7 156 aa12.88□□□□□ -0.35
CPSF3-203ENST00000475482 NBEAL1Q6ZS30 2694 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 TRAV24A0A0B4J272 114 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 OR2AT4A6NND4 320 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 SIRPB1O00241 398 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 ENSAO43768 121 aaKnown RBP12.87□□□□□ -0.35
CPSF3-203ENST00000475482 MT-ND4P03905 459 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 LIPFP07098 398 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 FCGR3AP08637 254 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 HLA-DMAP28067 261 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 CD276Q5ZPR3 534 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 MOB1BQ7L9L4 216 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 TMEM17Q86X19 198 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 SIGLECL1Q8N7X8 197 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 BOLLQ8N9W6 283 aaKnown RBP12.87□□□□□ -0.35
CPSF3-203ENST00000475482 OR4C16Q8NGL9 310 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 OR5H2Q8NGV7 314 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 PRRT1Q99946 306 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 WDR13Q9H1Z4 485 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 ZNF286AQ9HBT8 521 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 NUBP2Q9Y5Y2 271 aa12.87□□□□□ -0.35
CPSF3-203ENST00000475482 TRBV6-6A0A0A6YYG2 114 aa12.86□□□□□ -0.35
CPSF3-203ENST00000475482 RFPL4AA6NLU0 287 aa12.86□□□□□ -0.35
CPSF3-203ENST00000475482 RFPL4AL1F8VTS6 287 aa12.86□□□□□ -0.35
CPSF3-203ENST00000475482 CLDN34H7C241 214 aa12.86□□□□□ -0.35
CPSF3-203ENST00000475482 SLC33A1O00400 549 aaPredicted RBP12.86□□□□□ -0.35
CPSF3-203ENST00000475482 ADAM20O43506 726 aa12.86□□□□□ -0.35
CPSF3-203ENST00000475482 GYPAP02724 150 aa12.86□□□□□ -0.35
CPSF3-203ENST00000475482 MMP9P14780 707 aa12.86□□□□□ -0.35
CPSF3-203ENST00000475482 PRTN3P24158 256 aa12.86□□□□□ -0.35
CPSF3-203ENST00000475482 PRDX2P32119 198 aa12.86□□□□□ -0.35
CPSF3-203ENST00000475482 KIR2DS4P43632 304 aa12.86□□□□□ -0.35
CPSF3-203ENST00000475482 ARPC4P59998 168 aa12.86□□□□□ -0.35
CPSF3-203ENST00000475482 KIR2DS1Q14954 304 aa12.86□□□□□ -0.35
CPSF3-203ENST00000475482 ATPAF1Q5TC12 328 aaPredicted RBP12.86□□□□□ -0.35
CPSF3-203ENST00000475482 Q6ZS49 121 aa12.86□□□□□ -0.35
CPSF3-203ENST00000475482 GVQW1Q8N7I0 195 aa12.86□□□□□ -0.35
CPSF3-203ENST00000475482 OR5AP2Q8NGF4 316 aa12.86□□□□□ -0.35
CPSF3-203ENST00000475482 CREB3L1Q96BA8 519 aa12.86□□□□□ -0.35
CPSF3-203ENST00000475482 NAPSAO96009 420 aa12.85□□□□□ -0.35
CPSF3-203ENST00000475482 AMY2AP04746 511 aa12.85□□□□□ -0.35
CPSF3-203ENST00000475482 PSG2P11465 335 aa12.85□□□□□ -0.35
CPSF3-203ENST00000475482 HRH1P35367 487 aa12.85□□□□□ -0.35
CPSF3-203ENST00000475482 BPIFB3P59826 476 aa12.85□□□□□ -0.35
CPSF3-203ENST00000475482 RBMS2Q15434 407 aaKnown RBP12.85□□□□□ -0.35
CPSF3-203ENST00000475482 PLA1AQ53H76 456 aa12.85□□□□□ -0.35
CPSF3-203ENST00000475482 VAX1Q5SQQ9 334 aa12.85□□□□□ -0.35
CPSF3-203ENST00000475482 BRICD5Q6PL45 260 aa12.85□□□□□ -0.35
CPSF3-203ENST00000475482 C12orf54Q6X4T0 127 aa12.85□□□□□ -0.35
CPSF3-203ENST00000475482 ZNF561Q8N587 486 aa12.85□□□□□ -0.35
CPSF3-203ENST00000475482 ARRDC1Q8N5I2 433 aa12.85□□□□□ -0.35
CPSF3-203ENST00000475482 OR4S1Q8NGB4 309 aa12.85□□□□□ -0.35
CPSF3-203ENST00000475482 DMRTB1Q96MA1 342 aa12.85□□□□□ -0.35
CPSF3-203ENST00000475482 SLC25A21Q9BQT8 299 aaPredicted RBP12.85□□□□□ -0.35
CPSF3-203ENST00000475482 MS4A7Q9GZW8 240 aaPredicted RBP12.85□□□□□ -0.35
CPSF3-203ENST00000475482 ZNF581Q9P0T4 197 aa12.85□□□□□ -0.35
CPSF3-203ENST00000475482 ANXA10Q9UJ72 324 aa12.85□□□□□ -0.35
CPSF3-203ENST00000475482 SOX21Q9Y651 276 aaPredicted RBP12.85□□□□□ -0.35
CPSF3-203ENST00000475482 IGHV3OR15-7A0A075B7D8 119 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 TRAV40A0A0B4J280 105 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 FUOMA2VDF0 154 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 DNAJC9-AS1A6NH13 148 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 NKX6-3A6NJ46 265 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 HSPB6O14558 160 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 DVL1O14640 695 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 DHFRP00374 187 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 TCRBP04435 133 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 CSN2P05814 226 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 BTCP35070 178 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 GABRA2P47869 451 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 RAG2P55895 527 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 TSPAN5P62079 268 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 CDK10Q15131 360 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 GRK1Q15835 563 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 RSBN1Q5VWQ0 802 aaPredicted RBP12.84□□□□□ -0.35
CPSF3-203ENST00000475482 STUMQ69YW2 141 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 OR52W1Q6IF63 320 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 RBMS3Q6XE24 437 aaKnown RBP12.84□□□□□ -0.35
CPSF3-203ENST00000475482 BTN2A1Q7KYR7 527 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 RTN4RL2Q86UN3 420 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 OR5D13Q8NGL4 314 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 SNAPC3Q92966 411 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 SNX22Q96L94 193 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 MARVELD1Q9BSK0 173 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 SIRPDQ9H106 197 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 DNTTIP1Q9H147 329 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 NECAP2Q9NVZ3 263 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 SLC2A8Q9NY64 477 aa12.84□□□□□ -0.35
CPSF3-203ENST00000475482 IGHV3OR16-10A0A075B7F0 116 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 TMEM30CPA0ZSE6 113 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 M0QYG6 137 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 TMPRSS2O15393 492 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 FCER2P06734 321 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 CTXN2P0C2S0 81 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 SPNP16150 400 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 PAX5Q02548 391 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 COL10A1Q03692 680 aa12.83□□□□□ -0.36
CPSF3-203ENST00000475482 SLC35E4Q6ICL7 350 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms