RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 AMIGO2Q86SJ2 522 aa15.87■□□□□ 0.13
VPS36-203ENST00000475375 PARP16Q8N5Y8 322 aa15.87■□□□□ 0.13
VPS36-203ENST00000475375 ISOC1Q96CN7 298 aa15.87■□□□□ 0.13
VPS36-203ENST00000475375 MRPL48Q96GC5 212 aaKnown RBP15.87■□□□□ 0.13
VPS36-203ENST00000475375 CHCHD6Q9BRQ6 235 aa15.87■□□□□ 0.13
VPS36-203ENST00000475375 GHITMQ9H3K2 345 aa15.87■□□□□ 0.13
VPS36-203ENST00000475375 FASP25445 335 aa15.86■□□□□ 0.13
VPS36-203ENST00000475375 KIAA0141Q14154 515 aaPredicted RBP15.86■□□□□ 0.13
VPS36-203ENST00000475375 ATAD3CQ5T2N8 411 aa15.86■□□□□ 0.13
VPS36-203ENST00000475375 ACBD7Q8N6N7 88 aa15.86■□□□□ 0.13
VPS36-203ENST00000475375 OR6Q1Q8NGQ2 317 aa15.86■□□□□ 0.13
VPS36-203ENST00000475375 OR5AK2Q8NH90 309 aa15.86■□□□□ 0.13
VPS36-203ENST00000475375 DLX4Q92988 240 aaPredicted RBP15.86■□□□□ 0.13
VPS36-203ENST00000475375 GABARAPL3Q9BY60 117 aa15.86■□□□□ 0.13
VPS36-203ENST00000475375 ALX4Q9H161 411 aaPredicted RBP15.86■□□□□ 0.13
VPS36-203ENST00000475375 GNG12Q9UBI6 72 aa15.86■□□□□ 0.13
VPS36-203ENST00000475375 ING4Q9UNL4 249 aa15.86■□□□□ 0.13
VPS36-203ENST00000475375 ATP6V0E1O15342 81 aa15.85■□□□□ 0.13
VPS36-203ENST00000475375 CDRT1O95170 752 aa15.85■□□□□ 0.13
VPS36-203ENST00000475375 CSTBP04080 98 aaKnown RBP15.85■□□□□ 0.13
VPS36-203ENST00000475375 PPIFP30405 207 aaKnown RBP15.85■□□□□ 0.13
VPS36-203ENST00000475375 RAB9AP51151 201 aa15.85■□□□□ 0.13
VPS36-203ENST00000475375 SLURP1P55000 103 aa15.85■□□□□ 0.13
VPS36-203ENST00000475375 SLC25A48Q6ZT89 311 aaKnown RBP15.85■□□□□ 0.13
VPS36-203ENST00000475375 OR10V1Q8NGI7 309 aa15.85■□□□□ 0.13
VPS36-203ENST00000475375 OR51A2Q8NGJ7 313 aa15.85■□□□□ 0.13
VPS36-203ENST00000475375 OR51J1Q9H342 316 aa15.85■□□□□ 0.13
VPS36-203ENST00000475375 TRAV41A0A0B4J266 112 aa15.84■□□□□ 0.13
VPS36-203ENST00000475375 TMEM212A6NML5 194 aa15.84■□□□□ 0.13
VPS36-203ENST00000475375 J3QRE1 110 aa15.84■□□□□ 0.13
VPS36-203ENST00000475375 AIPO00170 330 aa15.84■□□□□ 0.13
VPS36-203ENST00000475375 ORC5O43913 435 aa15.84■□□□□ 0.13
VPS36-203ENST00000475375 RPSAP08865 295 aaKnown RBP15.84■□□□□ 0.13
VPS36-203ENST00000475375 RBM11P57052 281 aaKnown RBP15.84■□□□□ 0.13
VPS36-203ENST00000475375 STX19Q8N4C7 294 aa15.84■□□□□ 0.13
VPS36-203ENST00000475375 OR52N1Q8NH53 320 aa15.84■□□□□ 0.13
VPS36-203ENST00000475375 ARPC1AQ92747 370 aa15.84■□□□□ 0.13
VPS36-203ENST00000475375 PDCD1LG2Q9BQ51 273 aa15.84■□□□□ 0.13
VPS36-203ENST00000475375 METTL9Q9H1A3 318 aa15.84■□□□□ 0.13
VPS36-203ENST00000475375 LINC01619G3V211 115 aa15.83■□□□□ 0.12
VPS36-203ENST00000475375 GEMIN2O14893 280 aaKnown RBP15.83■□□□□ 0.12
VPS36-203ENST00000475375 LDLRAD4O15165 306 aa15.83■□□□□ 0.12
VPS36-203ENST00000475375 IGLV1-40P01703 118 aa15.83■□□□□ 0.12
VPS36-203ENST00000475375 SOX2P48431 317 aa15.83■□□□□ 0.12
VPS36-203ENST00000475375 LSAMPQ13449 338 aa15.83■□□□□ 0.12
VPS36-203ENST00000475375 GALEQ14376 348 aa15.83■□□□□ 0.12
VPS36-203ENST00000475375 Q3ZCU0 254 aa15.83■□□□□ 0.12
VPS36-203ENST00000475375 LHFPL3Q86UP9 236 aa15.83■□□□□ 0.12
VPS36-203ENST00000475375 PRR18Q8N4B5 295 aa15.83■□□□□ 0.12
VPS36-203ENST00000475375 TRUB1Q8WWH5 349 aaKnown RBP15.83■□□□□ 0.12
VPS36-203ENST00000475375 MYCBPQ99417 103 aaPredicted RBP15.83■□□□□ 0.12
VPS36-203ENST00000475375 S100A13Q99584 98 aa15.83■□□□□ 0.12
VPS36-203ENST00000475375 TM2D3Q9BRN9 247 aa15.83■□□□□ 0.12
VPS36-203ENST00000475375 ALG8Q9BVK2 526 aa15.83■□□□□ 0.12
VPS36-203ENST00000475375 IFT22Q9H7X7 185 aa15.83■□□□□ 0.12
VPS36-203ENST00000475375 TAS2R4Q9NYW5 299 aa15.83■□□□□ 0.12
VPS36-203ENST00000475375 CSMD3Q7Z407 3707 aa15.83■□□□□ 0.12
VPS36-203ENST00000475375 SPINT2O43291 252 aa15.82■□□□□ 0.12
VPS36-203ENST00000475375 SERPINA2P20848 420 aa15.82■□□□□ 0.12
VPS36-203ENST00000475375 ZNF137PP52743 207 aa15.82■□□□□ 0.12
VPS36-203ENST00000475375 CT45A1Q5HYN5 189 aa15.82■□□□□ 0.12
VPS36-203ENST00000475375 ZNF497Q6ZNH5 498 aa15.82■□□□□ 0.12
VPS36-203ENST00000475375 ZNF439Q8NDP4 499 aa15.82■□□□□ 0.12
VPS36-203ENST00000475375 CT45A3Q8NHU0 189 aa15.82■□□□□ 0.12
VPS36-203ENST00000475375 ZNF251Q9BRH9 671 aa15.82■□□□□ 0.12
VPS36-203ENST00000475375 ISG20L2Q9H9L3 353 aaKnown RBP15.82■□□□□ 0.12
VPS36-203ENST00000475375 RAB9BQ9NP90 201 aa15.82■□□□□ 0.12
VPS36-203ENST00000475375 TRAPPC2LQ9UL33 140 aa15.82■□□□□ 0.12
VPS36-203ENST00000475375 AP4S1Q9Y587 144 aa15.82■□□□□ 0.12
VPS36-203ENST00000475375 MT-ND4P03905 459 aa15.81■□□□□ 0.12
VPS36-203ENST00000475375 OR8U9P0C7N5 309 aa15.81■□□□□ 0.12
VPS36-203ENST00000475375 IGHV4-30-4P0DP06 118 aa15.81■□□□□ 0.12
VPS36-203ENST00000475375 BLVRBP30043 206 aaPredicted RBP15.81■□□□□ 0.12
VPS36-203ENST00000475375 VHLP40337 213 aa15.81■□□□□ 0.12
VPS36-203ENST00000475375 ZNF134P52741 427 aa15.81■□□□□ 0.12
VPS36-203ENST00000475375 ACTBP60709 375 aa15.81■□□□□ 0.12
VPS36-203ENST00000475375 PITPNAQ00169 270 aa15.81■□□□□ 0.12
VPS36-203ENST00000475375 NHLRC3Q5JS37 347 aa15.81■□□□□ 0.12
VPS36-203ENST00000475375 ACSM6Q6P461 480 aa15.81■□□□□ 0.12
VPS36-203ENST00000475375 ASCL4Q6XD76 172 aa15.81■□□□□ 0.12
VPS36-203ENST00000475375 LINC00596Q86U02 117 aa15.81■□□□□ 0.12
VPS36-203ENST00000475375 OR4C12Q96R67 309 aa15.81■□□□□ 0.12
VPS36-203ENST00000475375 OAZ3Q9UMX2 235 aa15.81■□□□□ 0.12
VPS36-203ENST00000475375 FAM90A10PA6NDY2 464 aa15.8■□□□□ 0.12
VPS36-203ENST00000475375 SNTNA6NMZ2 147 aa15.8■□□□□ 0.12
VPS36-203ENST00000475375 C12orf77C9JDV5 145 aa15.8■□□□□ 0.12
VPS36-203ENST00000475375 E9PI62 339 aa15.8■□□□□ 0.12
VPS36-203ENST00000475375 LANCL1O43813 399 aa15.8■□□□□ 0.12
VPS36-203ENST00000475375 HLA-DRB1P01911 266 aa15.8■□□□□ 0.12
VPS36-203ENST00000475375 CNTFRP26992 372 aa15.8■□□□□ 0.12
VPS36-203ENST00000475375 ECSCRQ19T08 205 aa15.8■□□□□ 0.12
VPS36-203ENST00000475375 MEDAGQ5VYS4 303 aa15.8■□□□□ 0.12
VPS36-203ENST00000475375 ZNF529Q6P280 563 aa15.8■□□□□ 0.12
VPS36-203ENST00000475375 SYS1Q8N2H4 156 aa15.8■□□□□ 0.12
VPS36-203ENST00000475375 CASTOR1Q8WTX7 329 aa15.8■□□□□ 0.12
VPS36-203ENST00000475375 LGALS12Q96DT0 336 aa15.8■□□□□ 0.12
VPS36-203ENST00000475375 ANKRD60Q9BZ19 345 aa15.8■□□□□ 0.12
VPS36-203ENST00000475375 EDA2RQ9HAV5 297 aa15.8■□□□□ 0.12
VPS36-203ENST00000475375 ERGIC3Q9Y282 383 aa15.8■□□□□ 0.12
VPS36-203ENST00000475375 EXOGQ9Y2C4 368 aaKnown RBP15.8■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms