RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 MMDQ15546 238 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 SRSF7Q16629 238 aaKnown RBP eCLIP9.76□□□□□ -0.85
SKA3-206ENST00000475251 ZSCAN26Q16670 478 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 ACSM6Q6P461 480 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 ADAMTSL5Q6ZMM2 481 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 SLC25A48Q6ZT89 311 aaKnown RBP9.76□□□□□ -0.85
SKA3-206ENST00000475251 LINC00596Q86U02 117 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 SGPP2Q8IWX5 399 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 PARP16Q8N5Y8 322 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 SUMF2Q8NBJ7 301 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 OR10AC1Q8NH08 325 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 TNFAIP8L1Q8WVP5 186 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 DLX4Q92988 240 aaPredicted RBP9.76□□□□□ -0.85
SKA3-206ENST00000475251 SPATA25Q9BR10 227 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 KLK15Q9H2R5 256 aa9.76□□□□□ -0.85
SKA3-206ENST00000475251 TRAV39A0A0B4J263 110 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 TRAV41A0A0B4J266 112 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 FAM90A10PA6NDY2 464 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 TRIM64CA6NLI5 447 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 OR4C45A6NMZ5 311 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 ZNF736B4DX44 427 aaPredicted RBP9.75□□□□□ -0.85
SKA3-206ENST00000475251 C15orf65H3BRN8 121 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 ARPC1BO15143 372 aaKnown RBP9.75□□□□□ -0.85
SKA3-206ENST00000475251 OR7C1O76099 320 aaPredicted RBP9.75□□□□□ -0.85
SKA3-206ENST00000475251 HLA-DRB1P01911 266 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 IFNA6P05013 189 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 T-ENOLP0DO92 83 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 IGHV4-30-4P0DP06 118 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 RAB3AP20336 220 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 MYF6P23409 242 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 PIGYQ3MUY2 71 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 DNAL1Q4LDG9 190 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 NHLRC3Q5JS37 347 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 STX19Q8N4C7 294 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 IL17DQ8TAD2 202 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 GABARAPL1Q9H0R8 117 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 RIBC2Q9H4K1 309 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 PAK1IP1Q9NWT1 392 aaPredicted RBP9.75□□□□□ -0.85
SKA3-206ENST00000475251 GNG12Q9UBI6 72 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 DHDHQ9UQ10 334 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 ST3GAL6Q9Y274 331 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 WSB1Q9Y6I7 421 aa9.75□□□□□ -0.85
SKA3-206ENST00000475251 TMEM212A6NML5 194 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 SNTNA6NMZ2 147 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 G3V318 75 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 J3QLW9 94 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 GABRPO00591 440 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 ATP6V0E1O15342 81 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 SPINT2O43291 252 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 HSPA12AO43301 675 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 ATP8B1O43520 1251 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 HTR3BO95264 441 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 ZNF19P17023 458 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 MRPL28Q13084 256 aaKnown RBP9.74□□□□□ -0.85
SKA3-206ENST00000475251 LSAMPQ13449 338 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 ATP6AP1Q15904 470 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 MPV17LQ2QL34 196 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 LPCAT4Q643R3 524 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 STEAP3Q658P3 488 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 SATL1Q86VE3 508 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 TCTEX1D1Q8N7M0 179 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 NEK7Q8TDX7 302 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 TSEN15Q8WW01 171 aaKnown RBP9.74□□□□□ -0.85
SKA3-206ENST00000475251 TRUB1Q8WWH5 349 aaKnown RBP9.74□□□□□ -0.85
SKA3-206ENST00000475251 ARPC1AQ92747 370 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 FLYWCH2Q96CP2 140 aaKnown RBP9.74□□□□□ -0.85
SKA3-206ENST00000475251 PELI1Q96FA3 418 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 C4orf36Q96KX1 117 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 S100A13Q99584 98 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 ZNF251Q9BRH9 671 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 ELOVL1Q9BW60 279 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 JAM3Q9BX67 310 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 CST11Q9H112 138 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 PARP11Q9NR21 331 aa9.74□□□□□ -0.85
SKA3-206ENST00000475251 IGHV3-43A0A0B4J1X8 118 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 MAGEA13PA6NCF6 341 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 AIPO00170 330 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 GYG2O15488 501 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 LANCL1O43813 399 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 LGALS1P09382 135 aaKnown RBP9.73□□□□□ -0.85
SKA3-206ENST00000475251 IGHV3-43DP0DP04 118 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 SLURP1P55000 103 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 RBM11P57052 281 aaKnown RBP9.73□□□□□ -0.85
SKA3-206ENST00000475251 ATAD3CQ5T2N8 411 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 C6orf183Q5T699 404 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 PYHIN1Q6K0P9 492 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 TRAT1Q6PIZ9 186 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 ASCL4Q6XD76 172 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 ACBD7Q8N6N7 88 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 MINDY2Q8NBR6 621 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 OR10K1Q8NGX5 313 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 OR52N1Q8NH53 320 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 OR5AK2Q8NH90 309 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 CIB1Q99828 191 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 GABARAPL3Q9BY60 117 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 TOLLIPQ9H0E2 274 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 METTL9Q9H1A3 318 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 ZFAND3Q9H8U3 227 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 SPACA1Q9HBV2 294 aa9.73□□□□□ -0.85
SKA3-206ENST00000475251 IMPAD1Q9NX62 359 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms