RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 A0A0A6YYH2 397 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 MEIOCA2RUB1 952 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 A6NJ64 397 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 F2RL2O00254 374 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 SPINT2O43291 252 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 HBZP02008 142 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 CD3GP09693 182 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 CD34P28906 385 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 MRPS15P82914 257 aaKnown RBP12.81□□□□□ -0.36
COL1A1-204ENST00000474644 ARL6IP1Q15041 203 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 HMGN3Q15651 99 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 DEFB112Q30KQ8 113 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 CDNFQ49AH0 187 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 ABHD12Q8N2K0 398 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 PRR18Q8N4B5 295 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 SIGLECL1Q8N7X8 197 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 OR1L1Q8NH94 360 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 SETD6Q8TBK2 473 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 PHF21AQ96BD5 680 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 KCNIP1Q9NZI2 227 aa12.81□□□□□ -0.36
COL1A1-204ENST00000474644 CCDC59Q9P031 241 aaKnown RBP12.81□□□□□ -0.36
COL1A1-204ENST00000474644 ELF5Q9UKW6 265 aaPredicted RBP12.81□□□□□ -0.36
COL1A1-204ENST00000474644 SDCBPO00560 298 aaPredicted RBP12.8□□□□□ -0.36
COL1A1-204ENST00000474644 IFNA2P01563 188 aa12.8□□□□□ -0.36
COL1A1-204ENST00000474644 ARG1P05089 322 aa12.8□□□□□ -0.36
COL1A1-204ENST00000474644 EIF4EP06730 217 aaKnown RBP12.8□□□□□ -0.36
COL1A1-204ENST00000474644 FCGR3AP08637 254 aa12.8□□□□□ -0.36
COL1A1-204ENST00000474644 GSTP1P09211 210 aaKnown RBP12.8□□□□□ -0.36
COL1A1-204ENST00000474644 SOX6P35712 828 aa12.8□□□□□ -0.36
COL1A1-204ENST00000474644 ZNF260Q3ZCT1 412 aa12.8□□□□□ -0.36
COL1A1-204ENST00000474644 HACD4Q5VWC8 232 aa12.8□□□□□ -0.36
COL1A1-204ENST00000474644 C5orf24Q7Z6I8 188 aa12.8□□□□□ -0.36
COL1A1-204ENST00000474644 PRIMA1Q86XR5 153 aa12.8□□□□□ -0.36
COL1A1-204ENST00000474644 ZNF418Q8TF45 676 aaPredicted RBP12.8□□□□□ -0.36
COL1A1-204ENST00000474644 LEAP2Q969E1 77 aa12.8□□□□□ -0.36
COL1A1-204ENST00000474644 AJUBAQ96IF1 538 aa12.8□□□□□ -0.36
COL1A1-204ENST00000474644 Q9N2K0 584 aa12.8□□□□□ -0.36
COL1A1-204ENST00000474644 RAB9BQ9NP90 201 aa12.8□□□□□ -0.36
COL1A1-204ENST00000474644 RSL24D1Q9UHA3 163 aaKnown RBP12.8□□□□□ -0.36
COL1A1-204ENST00000474644 TRAV18A0A075B6X5 111 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 IGHV3-43A0A0B4J1X8 118 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 TMEM235A6NFC5 223 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 POM121CA8CG34 1229 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 ZNF701M0R085 212 aaPredicted RBP12.79□□□□□ -0.36
COL1A1-204ENST00000474644 HPGDSO60760 199 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 IGHV3-43DP0DP04 118 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 LOXL3P58215 753 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 HILS1P60008 231 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 HLA-DRB3P79483 266 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 ARFRP1Q13795 201 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 TMEM30BQ3MIR4 351 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 FAM53AQ6NSI3 398 aaPredicted RBP12.79□□□□□ -0.36
COL1A1-204ENST00000474644 MZT2AQ6P582 158 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 LHFPL4Q7Z7J7 247 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 IZUMO1Q8IYV9 350 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 OR52M1Q8NGK5 317 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 OR4P4Q8NGL7 312 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 NUDCD2Q8WVJ2 157 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 C17orf50Q8WW18 174 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 S100A16Q96FQ6 103 aaKnown RBP12.79□□□□□ -0.36
COL1A1-204ENST00000474644 CMTM3Q96MX0 182 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 PRDM13Q9H4Q3 707 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 DIABLOQ9NR28 239 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 GFOD1Q9NXC2 390 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 TBL2Q9Y4P3 447 aaKnown RBP12.79□□□□□ -0.36
COL1A1-204ENST00000474644 DNHD1Q96M86 4753 aa12.79□□□□□ -0.36
COL1A1-204ENST00000474644 SMIM31A0A1B0GVY4 71 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 XRCC3O43542 346 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 TCF21O43680 179 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 IGLV1-47P01700 117 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 IGHV3-7P01780 117 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 APOA1P02647 267 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 FBP1P09467 338 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 ELK1P19419 428 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 GNG10P50151 68 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 LGALS4P56470 323 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 PNLIPRP3Q17RR3 467 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 LDLRAD2Q5SZI1 272 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 RBMS3Q6XE24 437 aaKnown RBP12.78□□□□□ -0.36
COL1A1-204ENST00000474644 DTX3Q8N9I9 347 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 BEND2Q8NDZ0 799 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 OR9G1Q8NH87 305 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 AUNIPQ9H7T9 357 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 ZNRD1Q9P1U0 126 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 GNG12Q9UBI6 72 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 MGAT4AQ9UM21 535 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 PSG11Q9UQ72 335 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 FAM96BQ9Y3D0 163 aa12.78□□□□□ -0.36
COL1A1-204ENST00000474644 KIAA2026Q5HYC2 2103 aa12.77□□□□□ -0.36
COL1A1-204ENST00000474644 TOR1AO14656 332 aa12.77□□□□□ -0.37
COL1A1-204ENST00000474644 SSX5O60225 188 aa12.77□□□□□ -0.37
COL1A1-204ENST00000474644 TALDO1P37837 337 aa12.77□□□□□ -0.37
COL1A1-204ENST00000474644 TAS2R20P59543 309 aa12.77□□□□□ -0.37
COL1A1-204ENST00000474644 GNG2P59768 71 aa12.77□□□□□ -0.37
COL1A1-204ENST00000474644 HTD2P86397 168 aa12.77□□□□□ -0.37
COL1A1-204ENST00000474644 GNMTQ14749 295 aa12.77□□□□□ -0.37
COL1A1-204ENST00000474644 HLA-DRB5Q30154 266 aa12.77□□□□□ -0.37
COL1A1-204ENST00000474644 TMEM69Q5SWH9 247 aa12.77□□□□□ -0.37
COL1A1-204ENST00000474644 LDLRAD3Q86YD5 345 aa12.77□□□□□ -0.37
COL1A1-204ENST00000474644 OR52L2PQ8NGH6 319 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms