RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 CA11O75493 328 aa16.12■□□□□ 0.17
PDLIM4-206ENST00000474421 MAPK3P27361 379 aaPredicted RBP16.12■□□□□ 0.17
PDLIM4-206ENST00000474421 SLC6A1P30531 599 aa16.12■□□□□ 0.17
PDLIM4-206ENST00000474421 RCN1Q15293 331 aa16.12■□□□□ 0.17
PDLIM4-206ENST00000474421 SLC35E3Q7Z769 313 aa16.12■□□□□ 0.17
PDLIM4-206ENST00000474421 NKAIN3Q8N8D7 197 aa16.12■□□□□ 0.17
PDLIM4-206ENST00000474421 OR2T10Q8NGZ9 312 aa16.12■□□□□ 0.17
PDLIM4-206ENST00000474421 DERL3Q96Q80 235 aa16.12■□□□□ 0.17
PDLIM4-206ENST00000474421 GPR61Q9BZJ8 451 aa16.12■□□□□ 0.17
PDLIM4-206ENST00000474421 ZFP57Q9NU63 452 aa16.12■□□□□ 0.17
PDLIM4-206ENST00000474421 ETAA1Q9NY74 926 aa16.12■□□□□ 0.17
PDLIM4-206ENST00000474421 A0A1W2PPK0 400 aa16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 TXNL1O43396 289 aa16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 IGHG2P01859 326 aa16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 MAS1P04201 325 aa16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 GLAP06280 429 aa16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 CELP19835 753 aa16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 REG1BP48304 166 aa16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 WNT4P56705 351 aa16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 SYT6Q5T7P8 510 aaPredicted RBP16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 RAB12Q6IQ22 244 aa16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 ZNF329Q86UD4 541 aa16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 TGIF2LXQ8IUE1 241 aa16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 EAF1Q96JC9 268 aaPredicted RBP16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 UQCC2Q9BRT2 126 aa16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 PLCXD1Q9NUJ7 323 aa16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 GNG12Q9UBI6 72 aa16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 PSORS1C1Q9UIG5 152 aa16.11■□□□□ 0.17
PDLIM4-206ENST00000474421 PNMA8CA0A1B0GUJ8 204 aa16.1■□□□□ 0.17
PDLIM4-206ENST00000474421 NCBP2LA6PVI3 153 aaKnown RBP16.1■□□□□ 0.17
PDLIM4-206ENST00000474421 C12orf77C9JDV5 145 aa16.1■□□□□ 0.17
PDLIM4-206ENST00000474421 CD1BP29016 333 aa16.1■□□□□ 0.17
PDLIM4-206ENST00000474421 RPL23AP62750 156 aaKnown RBP16.1■□□□□ 0.17
PDLIM4-206ENST00000474421 AHSA2Q719I0 299 aa16.1■□□□□ 0.17
PDLIM4-206ENST00000474421 GAPTQ8N292 157 aa16.1■□□□□ 0.17
PDLIM4-206ENST00000474421 UBALD1Q8TB05 177 aa16.1■□□□□ 0.17
PDLIM4-206ENST00000474421 RTN4IP1Q8WWV3 396 aaPredicted RBP16.1■□□□□ 0.17
PDLIM4-206ENST00000474421 NOL4LQ96MY1 436 aaPredicted RBP16.1■□□□□ 0.17
PDLIM4-206ENST00000474421 GON7Q9BXV9 100 aa16.1■□□□□ 0.17
PDLIM4-206ENST00000474421 SELENOIQ9C0D9 397 aa16.1■□□□□ 0.17
PDLIM4-206ENST00000474421 GHRLQ9UBU3 117 aa16.1■□□□□ 0.17
PDLIM4-206ENST00000474421 ERGIC3Q9Y282 383 aa16.1■□□□□ 0.17
PDLIM4-206ENST00000474421 PEX16Q9Y5Y5 336 aa16.1■□□□□ 0.17
PDLIM4-206ENST00000474421 IGHV3-43A0A0B4J1X8 118 aa16.09■□□□□ 0.17
PDLIM4-206ENST00000474421 CRTAPO75718 401 aaPredicted RBP16.09■□□□□ 0.17
PDLIM4-206ENST00000474421 GNAO1P09471 354 aa16.09■□□□□ 0.17
PDLIM4-206ENST00000474421 IGHV3-43DP0DP04 118 aa16.09■□□□□ 0.17
PDLIM4-206ENST00000474421 MGMTP16455 207 aa16.09■□□□□ 0.17
PDLIM4-206ENST00000474421 FUT3P21217 361 aa16.09■□□□□ 0.17
PDLIM4-206ENST00000474421 STEAP3Q658P3 488 aa16.09■□□□□ 0.17
PDLIM4-206ENST00000474421 SLC25A48Q6ZT89 311 aaKnown RBP16.09■□□□□ 0.17
PDLIM4-206ENST00000474421 Q8N6K4 173 aa16.09■□□□□ 0.17
PDLIM4-206ENST00000474421 OR8H1Q8NGG4 311 aa16.09■□□□□ 0.17
PDLIM4-206ENST00000474421 FBLIM1Q8WUP2 373 aa16.09■□□□□ 0.17
PDLIM4-206ENST00000474421 ST6GALNAC6Q969X2 333 aa16.09■□□□□ 0.17
PDLIM4-206ENST00000474421 VCXQ9H320 206 aa16.09■□□□□ 0.17
PDLIM4-206ENST00000474421 BANF2Q9H503 90 aa16.09■□□□□ 0.17
PDLIM4-206ENST00000474421 LIN7CQ9NUP9 197 aaKnown RBP16.09■□□□□ 0.17
PDLIM4-206ENST00000474421 IGHV3-72A0A0B4J1Y9 119 aa16.08■□□□□ 0.16
PDLIM4-206ENST00000474421 AP4M1O00189 453 aa16.08■□□□□ 0.16
PDLIM4-206ENST00000474421 MOSP00540 346 aa16.08■□□□□ 0.16
PDLIM4-206ENST00000474421 ZNF137PP52743 207 aa16.08■□□□□ 0.16
PDLIM4-206ENST00000474421 OGFRL1Q5TC84 451 aaPredicted RBP16.08■□□□□ 0.16
PDLIM4-206ENST00000474421 OR2W3Q7Z3T1 314 aa16.08■□□□□ 0.16
PDLIM4-206ENST00000474421 ZNF554Q86TJ5 538 aa16.08■□□□□ 0.16
PDLIM4-206ENST00000474421 STPG2Q8N412 459 aa16.08■□□□□ 0.16
PDLIM4-206ENST00000474421 NANOGP1Q8N7R0 232 aa16.08■□□□□ 0.16
PDLIM4-206ENST00000474421 LINC00482Q8N8I6 264 aa16.08■□□□□ 0.16
PDLIM4-206ENST00000474421 TMEM104Q8NE00 496 aa16.08■□□□□ 0.16
PDLIM4-206ENST00000474421 BPIFB6Q8NFQ5 453 aa16.08■□□□□ 0.16
PDLIM4-206ENST00000474421 OR4K15Q8NH41 348 aa16.08■□□□□ 0.16
PDLIM4-206ENST00000474421 DPF1Q92782 380 aa16.08■□□□□ 0.16
PDLIM4-206ENST00000474421 CST11Q9H112 138 aa16.08■□□□□ 0.16
PDLIM4-206ENST00000474421 ABCG5Q9H222 651 aa16.08■□□□□ 0.16
PDLIM4-206ENST00000474421 NUDT19A8MXV4 375 aa16.07■□□□□ 0.16
PDLIM4-206ENST00000474421 SC5DO75845 299 aa16.07■□□□□ 0.16
PDLIM4-206ENST00000474421 HBZP02008 142 aa16.07■□□□□ 0.16
PDLIM4-206ENST00000474421 LAIR2Q6ISS4 152 aa16.07■□□□□ 0.16
PDLIM4-206ENST00000474421 TEX38Q6PEX7 206 aa16.07■□□□□ 0.16
PDLIM4-206ENST00000474421 LYPD6Q86Y78 171 aa16.07■□□□□ 0.16
PDLIM4-206ENST00000474421 PRR18Q8N4B5 295 aa16.07■□□□□ 0.16
PDLIM4-206ENST00000474421 Q96M66 194 aa16.07■□□□□ 0.16
PDLIM4-206ENST00000474421 MCRIP2Q9BUT9 160 aaKnown RBP16.07■□□□□ 0.16
PDLIM4-206ENST00000474421 KCNIP1Q9NZI2 227 aa16.07■□□□□ 0.16
PDLIM4-206ENST00000474421 CASQ2O14958 399 aaPredicted RBP16.06■□□□□ 0.16
PDLIM4-206ENST00000474421 PDCD6O75340 191 aa16.06■□□□□ 0.16
PDLIM4-206ENST00000474421 MPIG6BO95866 241 aa16.06■□□□□ 0.16
PDLIM4-206ENST00000474421 UBBP0CG47 229 aa16.06■□□□□ 0.16
PDLIM4-206ENST00000474421 GPR12P47775 334 aa16.06■□□□□ 0.16
PDLIM4-206ENST00000474421 THBS3P49746 956 aa16.06■□□□□ 0.16
PDLIM4-206ENST00000474421 GPR50Q13585 617 aa16.06■□□□□ 0.16
PDLIM4-206ENST00000474421 MRPL41Q8IXM3 137 aaKnown RBP16.06■□□□□ 0.16
PDLIM4-206ENST00000474421 MS4A15Q8N5U1 240 aa16.06■□□□□ 0.16
PDLIM4-206ENST00000474421 Q8N9W7 124 aa16.06■□□□□ 0.16
PDLIM4-206ENST00000474421 ZNF439Q8NDP4 499 aa16.06■□□□□ 0.16
PDLIM4-206ENST00000474421 OR1L1Q8NH94 360 aa16.06■□□□□ 0.16
PDLIM4-206ENST00000474421 RASL11BQ9BPW5 248 aa16.06■□□□□ 0.16
PDLIM4-206ENST00000474421 FKBP14Q9NWM8 211 aa16.06■□□□□ 0.16
PDLIM4-206ENST00000474421 LINC00527Q9UJ94 153 aa16.06■□□□□ 0.16
PDLIM4-206ENST00000474421 SLC31A2O15432 143 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms