RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 SDCBPO00560 298 aaPredicted RBP6.87□□□□□ -1.31
CNN3-205ENST00000474409 SMAD7O15105 426 aaKnown RBP6.87□□□□□ -1.31
CNN3-205ENST00000474409 BET1O15155 118 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 RAB3DO95716 219 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 PMP2P02689 132 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 CD3DP04234 171 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 IFNA6P05013 189 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 MSMBP08118 114 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 SCTP09683 121 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 ZNF728P0DKX0 622 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 NAT1P18440 290 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 TBPP20226 339 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 GZMHP20718 246 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 OMGP23515 440 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 NFYBP25208 207 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 DEFA1P59665 94 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 DEFA3P59666 94 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 MEF2DQ14814 521 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 CDK10Q15131 360 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 TMEM249Q2WGJ8 235 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 TMEM30BQ3MIR4 351 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 METTL11BQ5VVY1 283 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 STEAP3Q658P3 488 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 TMEM200BQ69YZ2 307 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 FAAP20Q6NZ36 180 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 STEAP1BQ6NZ63 245 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 ZNF782Q6ZMW2 699 aaPredicted RBP6.87□□□□□ -1.31
CNN3-205ENST00000474409 LINC01356Q8N9X3 169 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 TMEM229BQ8NBD8 167 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 OR5AP2Q8NGF4 316 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 OR1L1Q8NH94 360 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 OR10J5Q8NHC4 309 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 RFESDQ8TAC1 157 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 CORO2AQ92828 525 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 CABLES2Q9BTV7 478 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 MCUBQ9NWR8 336 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 GNG12Q9UBI6 72 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 ZNF69Q9UC07 566 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 SLC23A1Q9UHI7 598 aa6.87□□□□□ -1.31
CNN3-205ENST00000474409 FLNAP21333 2647 aaKnown RBP6.87□□□□□ -1.31
CNN3-205ENST00000474409 ZNF469Q96JG9 3925 aaPredicted RBP6.86□□□□□ -1.31
CNN3-205ENST00000474409 IGHV3-43A0A0B4J1X8 118 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 TRAV20A0A0B4J274 112 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 FAM172BPA6NC97 362 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 DISC1C4P0D8 188 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 C15orf65H3BRN8 121 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 M0QYG6 137 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 M0R1W7 72 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 AMY2AP04746 511 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 CTXN2P0C2S0 81 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 IGHV3-43DP0DP04 118 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 ZNF16P17020 682 aaPredicted RBP6.86□□□□□ -1.31
CNN3-205ENST00000474409 FPR2P25090 351 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 GZMKP49863 264 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 DVL1P1P54792 670 aaPredicted RBP6.86□□□□□ -1.31
CNN3-205ENST00000474409 TSPAN5P62079 268 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 DCTN2Q13561 401 aaKnown RBP6.86□□□□□ -1.31
CNN3-205ENST00000474409 KLF9Q13886 244 aaPredicted RBP6.86□□□□□ -1.31
CNN3-205ENST00000474409 HERPUD1Q15011 391 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 C17orf58Q2M2W7 97 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 SCGB2B2Q4G0G5 96 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 IGSF11Q5DX21 431 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 DCAF12L2Q5VW00 463 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 GLCCI1Q86VQ1 547 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 TMEM17Q86X19 198 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 KIR3DL3Q8N743 410 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 LY6G5BQ8NDX9 201 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 OR10V1Q8NGI7 309 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 OR4C16Q8NGL9 310 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 DEDD2Q8WXF8 326 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 TINAGL1Q9GZM7 467 aaPredicted RBP6.86□□□□□ -1.31
CNN3-205ENST00000474409 PALMDQ9NP74 551 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 OR2S2Q9NQN1 319 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 IDI2-AS1Q9NZ38 188 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 JPT1Q9UK76 154 aa6.86□□□□□ -1.31
CNN3-205ENST00000474409 POLR3KQ9Y2Y1 108 aaPredicted RBP6.86□□□□□ -1.31
CNN3-205ENST00000474409 ASH1LQ9NR48 2969 aaKnown RBP6.86□□□□□ -1.31
CNN3-205ENST00000474409 TRBV6-7A0A0A0MS04 114 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 IGKV1-6A0A0C4DH72 117 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 NPIPB11E5RHQ5 1161 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 F2RL2O00254 374 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 LYRM1O43325 122 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 RGS11O94810 467 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 DIRAS3O95661 229 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 RBP4P02753 201 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 CD74P04233 296 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 OR5H8P0DN80 308 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 IGHV1-8P0DP01 117 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 IGHV4-31P0DP07 118 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 ZBTB25P24278 435 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 PPP1CCP36873 323 aaKnown RBP6.85□□□□□ -1.31
CNN3-205ENST00000474409 RFX2P48378 723 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 GNG10P50151 68 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 ERVFRD-1P60508 538 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 HERV-K104P61576 105 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 ARF6P62330 175 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 DYRK1AQ13627 763 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 GNMTQ14749 295 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 CR1LQ2VPA4 569 aa6.85□□□□□ -1.31
CNN3-205ENST00000474409 VAX1Q5SQQ9 334 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms