RNA–Protein interactions for RNA: ENST00000474157.1

GPNMB-209, Transcript of glycoprotein nmb, humanhuman

TSL 4

Gene GPNMB, Length 513 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-209ENST00000474157 OR13G1Q8NGZ3 307 aa6.25□□□□□ -1.41
GPNMB-209ENST00000474157 LGALS14Q8TCE9 139 aa6.25□□□□□ -1.41
GPNMB-209ENST00000474157 CXorf40BQ96DE9 158 aa6.25□□□□□ -1.41
GPNMB-209ENST00000474157 TSSK3Q96PN8 268 aa6.25□□□□□ -1.41
GPNMB-209ENST00000474157 DUX5Q96PT3 197 aa6.25□□□□□ -1.41
GPNMB-209ENST00000474157 AGMATQ9BSE5 352 aa6.25□□□□□ -1.41
GPNMB-209ENST00000474157 SDF2L1Q9HCN8 221 aa6.25□□□□□ -1.41
GPNMB-209ENST00000474157 CISHQ9NSE2 258 aa6.25□□□□□ -1.41
GPNMB-209ENST00000474157 CRLS1Q9UJA2 301 aa6.25□□□□□ -1.41
GPNMB-209ENST00000474157 FBXW11Q9UKB1 542 aa6.25□□□□□ -1.41
GPNMB-209ENST00000474157 PPIAL4AQ9Y536 164 aa6.25□□□□□ -1.41
GPNMB-209ENST00000474157 WSB1Q9Y6I7 421 aa6.25□□□□□ -1.41
GPNMB-209ENST00000474157 NAV2Q8IVL1 2488 aa6.25□□□□□ -1.41
GPNMB-209ENST00000474157 MYO10Q9HD67 2058 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 SAA2-SAA4A0A096LPE2 208 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 CENPVL1A0A0U1RR11 272 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 LRP5LA4QPB2 252 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 OR4C45A6NMZ5 311 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 B4DGG1 531 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 C17orf112F2Z3M2 114 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 HS3ST1O14792 307 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 TNFRSF13BO14836 293 aaPredicted RBP6.24□□□□□ -1.41
GPNMB-209ENST00000474157 DEGS1O15121 323 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 FFAR2O15552 330 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 CFIP05156 583 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 LGALS2P05162 132 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 FUT3P21217 361 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 ACVR1BP36896 505 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 ID1P41134 155 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 P2RY1P47900 373 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 AMTP48728 403 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 HINT1P49773 126 aaPredicted RBP6.24□□□□□ -1.41
GPNMB-209ENST00000474157 ATP5J2P56134 94 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 GNG3P63215 75 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 SIRPAP78324 504 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 Q0VG73 95 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 ATXN7L3Q14CW9 347 aaPredicted RBP6.24□□□□□ -1.41
GPNMB-209ENST00000474157 P2RY6Q15077 328 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 ELOCQ15369 112 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 PRICKLE4Q2TBC4 344 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 RNASE12Q5GAN4 147 aaKnown RBP6.24□□□□□ -1.41
GPNMB-209ENST00000474157 LYPLAL1Q5VWZ2 237 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 RPL7L1Q6DKI1 246 aaKnown RBP6.24□□□□□ -1.41
GPNMB-209ENST00000474157 PWWP2BQ6NUJ5 590 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 TRIM40Q6P9F5 258 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 AGTRAPQ6RW13 159 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 Q6ZSR6 202 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 YAF2Q8IY57 180 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 Q8NA96 180 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 APCDD1LQ8NCL9 501 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 OR10S1Q8NGN2 331 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 SYNPRQ8TBG9 265 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 FGGYQ96C11 551 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 SEC22AQ96IW7 307 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 SPANXDQ9BXN6 97 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 ST20Q9HBF5 79 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 RAB9BQ9NP90 201 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 CMC2Q9NRP2 79 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 ERRFI1Q9UJM3 462 aaPredicted RBP6.24□□□□□ -1.41
GPNMB-209ENST00000474157 DAPP1Q9UN19 280 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 WDR45Q9Y484 360 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 TSSC4Q9Y5U2 329 aaPredicted RBP6.24□□□□□ -1.41
GPNMB-209ENST00000474157 V9GY05 133 aa6.24□□□□□ -1.41
GPNMB-209ENST00000474157 CNOT1A5YKK6 2376 aaKnown RBP6.23□□□□□ -1.41
GPNMB-209ENST00000474157 A6NIN4 97 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.23□□□□□ -1.41
GPNMB-209ENST00000474157 K7EP34 96 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 RAB29O14966 203 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 MLNRO43193 412 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 ZNF253O75346 499 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 HRASP01112 189 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 PRH1P02810 166 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 HIST1H1DP16402 221 aaKnown RBP6.23□□□□□ -1.41
GPNMB-209ENST00000474157 CEBPBP17676 345 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 NPY1RP25929 384 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 UCNP55089 124 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 LOXL3P58215 753 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 YPEL3P61236 119 aaPredicted RBP6.23□□□□□ -1.41
GPNMB-209ENST00000474157 RPL38P63173 70 aaKnown RBP6.23□□□□□ -1.41
GPNMB-209ENST00000474157 MRPS6P82932 125 aaKnown RBP6.23□□□□□ -1.41
GPNMB-209ENST00000474157 PSG9Q00887 426 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 MEF2BQ02080 365 aaPredicted RBP6.23□□□□□ -1.41
GPNMB-209ENST00000474157 SRSF1Q07955 248 aaKnown RBP eCLIP6.23□□□□□ -1.41
GPNMB-209ENST00000474157 ELAVL3Q14576 367 aaKnown RBP6.23□□□□□ -1.41
GPNMB-209ENST00000474157 MSMO1Q15800 293 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 SRSF7Q16629 238 aaKnown RBP eCLIP6.23□□□□□ -1.41
GPNMB-209ENST00000474157 LRRC37A5PQ49AS3 106 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 TMEM97Q5BJF2 176 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 STPG1Q5TH74 334 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 ABHD17BQ5VST6 288 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 SLC18B1Q6NT16 456 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 ZNF621Q6ZSS3 439 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 RPS27LQ71UM5 84 aaKnown RBP6.23□□□□□ -1.41
GPNMB-209ENST00000474157 MDGA2Q7Z553 956 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 GPSM1Q86YR5 675 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 KRTAP19-1Q8IUB9 90 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 OR4N5Q8IXE1 308 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 SYS1Q8N2H4 156 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 TTC9CQ8N5M4 171 aa6.23□□□□□ -1.41
GPNMB-209ENST00000474157 FADS6Q8N9I5 356 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms