RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 ZNF439Q8NDP4 499 aa13.4□□□□□ -0.26
CUL4A-208ENST00000474116 OR5D14Q8NGL3 314 aa13.4□□□□□ -0.26
CUL4A-208ENST00000474116 OR10K1Q8NGX5 313 aa13.4□□□□□ -0.26
CUL4A-208ENST00000474116 ARPC1AQ92747 370 aa13.4□□□□□ -0.26
CUL4A-208ENST00000474116 TOLLIPQ9H0E2 274 aa13.4□□□□□ -0.26
CUL4A-208ENST00000474116 GHITMQ9H3K2 345 aa13.4□□□□□ -0.26
CUL4A-208ENST00000474116 IFT22Q9H7X7 185 aa13.4□□□□□ -0.26
CUL4A-208ENST00000474116 LINC01619G3V211 115 aa13.39□□□□□ -0.27
CUL4A-208ENST00000474116 GABRPO00591 440 aa13.39□□□□□ -0.27
CUL4A-208ENST00000474116 SLC16A6O15403 523 aa13.39□□□□□ -0.27
CUL4A-208ENST00000474116 ORC5O43913 435 aa13.39□□□□□ -0.27
CUL4A-208ENST00000474116 MYF6P23409 242 aa13.39□□□□□ -0.27
CUL4A-208ENST00000474116 POLR2IP36954 125 aaKnown RBP13.39□□□□□ -0.27
CUL4A-208ENST00000474116 RASSF2P50749 326 aa13.39□□□□□ -0.27
CUL4A-208ENST00000474116 LYPD6Q86Y78 171 aa13.39□□□□□ -0.27
CUL4A-208ENST00000474116 SERPINA12Q8IW75 414 aa13.39□□□□□ -0.27
CUL4A-208ENST00000474116 PARP16Q8N5Y8 322 aa13.39□□□□□ -0.27
CUL4A-208ENST00000474116 PELI1Q96FA3 418 aa13.39□□□□□ -0.27
CUL4A-208ENST00000474116 RITA1Q96K30 269 aa13.39□□□□□ -0.27
CUL4A-208ENST00000474116 IGHV4OR15-8A0A075B7B6 117 aa13.38□□□□□ -0.27
CUL4A-208ENST00000474116 A0A087WW49 117 aa13.38□□□□□ -0.27
CUL4A-208ENST00000474116 IGHV7-81A0A0B4J1V7 117 aa13.38□□□□□ -0.27
CUL4A-208ENST00000474116 TRAV41A0A0B4J266 112 aa13.38□□□□□ -0.27
CUL4A-208ENST00000474116 TMEM30CPA0ZSE6 113 aa13.38□□□□□ -0.27
CUL4A-208ENST00000474116 G3V2T6 193 aa13.38□□□□□ -0.27
CUL4A-208ENST00000474116 OR8U9P0C7N5 309 aa13.38□□□□□ -0.27
CUL4A-208ENST00000474116 ALKBH1Q13686 389 aaKnown RBP13.38□□□□□ -0.27
CUL4A-208ENST00000474116 C19orf54Q5BKX5 351 aa13.38□□□□□ -0.27
CUL4A-208ENST00000474116 CT45A1Q5HYN5 189 aa13.38□□□□□ -0.27
CUL4A-208ENST00000474116 OR8J1Q8NGP2 316 aa13.38□□□□□ -0.27
CUL4A-208ENST00000474116 CT45A3Q8NHU0 189 aa13.38□□□□□ -0.27
CUL4A-208ENST00000474116 CCDC107Q8WV48 283 aa13.38□□□□□ -0.27
CUL4A-208ENST00000474116 TNFAIP8L1Q8WVP5 186 aa13.38□□□□□ -0.27
CUL4A-208ENST00000474116 RFKQ969G6 155 aa13.38□□□□□ -0.27
CUL4A-208ENST00000474116 SOX15O60248 233 aa13.37□□□□□ -0.27
CUL4A-208ENST00000474116 JTBO76095 146 aa13.37□□□□□ -0.27
CUL4A-208ENST00000474116 HLA-DRB1P01911 266 aa13.37□□□□□ -0.27
CUL4A-208ENST00000474116 MT-ND4P03905 459 aa13.37□□□□□ -0.27
CUL4A-208ENST00000474116 LSAMPQ13449 338 aa13.37□□□□□ -0.27
CUL4A-208ENST00000474116 RSU1Q15404 277 aa13.37□□□□□ -0.27
CUL4A-208ENST00000474116 MMDQ15546 238 aa13.37□□□□□ -0.27
CUL4A-208ENST00000474116 LPCAT4Q643R3 524 aa13.37□□□□□ -0.27
CUL4A-208ENST00000474116 ZNF529Q6P280 563 aa13.37□□□□□ -0.27
CUL4A-208ENST00000474116 SPATA25Q9BR10 227 aa13.37□□□□□ -0.27
CUL4A-208ENST00000474116 GABARAPL1Q9H0R8 117 aa13.37□□□□□ -0.27
CUL4A-208ENST00000474116 PARP11Q9NR21 331 aa13.37□□□□□ -0.27
CUL4A-208ENST00000474116 ST3GAL6Q9Y274 331 aa13.37□□□□□ -0.27
CUL4A-208ENST00000474116 ALMS1Q8TCU4 4167 aa13.37□□□□□ -0.27
CUL4A-208ENST00000474116 DAPL1A0PJW8 107 aa13.36□□□□□ -0.27
CUL4A-208ENST00000474116 J3QLW9 94 aa13.36□□□□□ -0.27
CUL4A-208ENST00000474116 LANCL1O43813 399 aa13.36□□□□□ -0.27
CUL4A-208ENST00000474116 HTR3BO95264 441 aa13.36□□□□□ -0.27
CUL4A-208ENST00000474116 LGALS1P09382 135 aaKnown RBP13.36□□□□□ -0.27
CUL4A-208ENST00000474116 ZNF19P17023 458 aa13.36□□□□□ -0.27
CUL4A-208ENST00000474116 CNTFRP26992 372 aa13.36□□□□□ -0.27
CUL4A-208ENST00000474116 BLVRBP30043 206 aaPredicted RBP13.36□□□□□ -0.27
CUL4A-208ENST00000474116 NHLRC3Q5JS37 347 aa13.36□□□□□ -0.27
CUL4A-208ENST00000474116 SATL1Q86VE3 508 aa13.36□□□□□ -0.27
CUL4A-208ENST00000474116 OR4C12Q96R67 309 aa13.36□□□□□ -0.27
CUL4A-208ENST00000474116 CIB1Q99828 191 aa13.36□□□□□ -0.27
CUL4A-208ENST00000474116 ANKRD60Q9BZ19 345 aa13.36□□□□□ -0.27
CUL4A-208ENST00000474116 MRPS28Q9Y2Q9 187 aaKnown RBP13.36□□□□□ -0.27
CUL4A-208ENST00000474116 HSPA12AO43301 675 aa13.35□□□□□ -0.27
CUL4A-208ENST00000474116 OR7C1O76099 320 aaPredicted RBP13.35□□□□□ -0.27
CUL4A-208ENST00000474116 IGLV1-51P01701 117 aa13.35□□□□□ -0.27
CUL4A-208ENST00000474116 ACTBP60709 375 aa13.35□□□□□ -0.27
CUL4A-208ENST00000474116 PITPNAQ00169 270 aa13.35□□□□□ -0.27
CUL4A-208ENST00000474116 ATP6AP1Q15904 470 aa13.35□□□□□ -0.27
CUL4A-208ENST00000474116 HAGHQ16775 308 aa13.35□□□□□ -0.27
CUL4A-208ENST00000474116 ZNF497Q6ZNH5 498 aa13.35□□□□□ -0.27
CUL4A-208ENST00000474116 HAPLN4Q86UW8 402 aa13.35□□□□□ -0.27
CUL4A-208ENST00000474116 SGPP2Q8IWX5 399 aa13.35□□□□□ -0.27
CUL4A-208ENST00000474116 OR51A2Q8NGJ7 313 aa13.35□□□□□ -0.27
CUL4A-208ENST00000474116 C4orf36Q96KX1 117 aa13.35□□□□□ -0.27
CUL4A-208ENST00000474116 GPER1Q99527 375 aa13.35□□□□□ -0.27
CUL4A-208ENST00000474116 RIBC2Q9H4K1 309 aa13.35□□□□□ -0.27
CUL4A-208ENST00000474116 ENOPH1Q9UHY7 261 aa13.35□□□□□ -0.27
CUL4A-208ENST00000474116 FBXO7Q9Y3I1 522 aa13.35□□□□□ -0.27
CUL4A-208ENST00000474116 C12orf77C9JDV5 145 aa13.34□□□□□ -0.27
CUL4A-208ENST00000474116 GEMIN2O14893 280 aaKnown RBP13.34□□□□□ -0.27
CUL4A-208ENST00000474116 CDRT1O95170 752 aa13.34□□□□□ -0.27
CUL4A-208ENST00000474116 RAB3AP20336 220 aa13.34□□□□□ -0.27
CUL4A-208ENST00000474116 CRIP2P52943 208 aaPredicted RBP13.34□□□□□ -0.27
CUL4A-208ENST00000474116 RBM11P57052 281 aaKnown RBP13.34□□□□□ -0.27
CUL4A-208ENST00000474116 STEAP3Q658P3 488 aa13.34□□□□□ -0.27
CUL4A-208ENST00000474116 LIN54Q6MZP7 749 aa13.34□□□□□ -0.27
CUL4A-208ENST00000474116 OR52N1Q8NH53 320 aa13.34□□□□□ -0.27
CUL4A-208ENST00000474116 CASTOR1Q8WTX7 329 aa13.34□□□□□ -0.27
CUL4A-208ENST00000474116 CPNE2Q96FN4 548 aaPredicted RBP13.34□□□□□ -0.27
CUL4A-208ENST00000474116 GABARAPL3Q9BY60 117 aa13.34□□□□□ -0.27
CUL4A-208ENST00000474116 FAM192AQ9GZU8 254 aa13.34□□□□□ -0.27
CUL4A-208ENST00000474116 IL36GQ9NZH8 169 aa13.34□□□□□ -0.27
CUL4A-208ENST00000474116 HSPB1P04792 205 aaKnown RBP13.33□□□□□ -0.28
CUL4A-208ENST00000474116 NDPQ00604 133 aa13.33□□□□□ -0.28
CUL4A-208ENST00000474116 C5orf64Q2M2E5 130 aa13.33□□□□□ -0.28
CUL4A-208ENST00000474116 C1orf146Q5VVC0 180 aa13.33□□□□□ -0.28
CUL4A-208ENST00000474116 ZDHHC13Q8IUH4 622 aa13.33□□□□□ -0.28
CUL4A-208ENST00000474116 NPBQ8NG41 125 aa13.33□□□□□ -0.28
CUL4A-208ENST00000474116 OR10V1Q8NGI7 309 aa13.33□□□□□ -0.28
CUL4A-208ENST00000474116 DHDHQ9UQ10 334 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms