RNA–Protein interactions for RNA: ENST00000474047.5

VAMP4-203, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 1 (best)

Gene VAMP4, Length 1,738 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-203ENST00000474047 CD37P11049 281 aa11.46□□□□□ -0.58
VAMP4-203ENST00000474047 GALP22466 123 aa11.46□□□□□ -0.58
VAMP4-203ENST00000474047 CLDN12P56749 244 aa11.46□□□□□ -0.58
VAMP4-203ENST00000474047 UNC119Q13432 240 aa11.46□□□□□ -0.58
VAMP4-203ENST00000474047 MADCAM1Q13477 382 aa11.46□□□□□ -0.58
VAMP4-203ENST00000474047 ARSJQ5FYB0 599 aaPredicted RBP11.46□□□□□ -0.58
VAMP4-203ENST00000474047 OR52M1Q8NGK5 317 aa11.46□□□□□ -0.58
VAMP4-203ENST00000474047 OR2T6Q8NHC8 308 aa11.46□□□□□ -0.58
VAMP4-203ENST00000474047 FAM3DQ96BQ1 224 aa11.46□□□□□ -0.58
VAMP4-203ENST00000474047 FAAP24Q9BTP7 215 aa11.46□□□□□ -0.58
VAMP4-203ENST00000474047 TM2D1Q9BX74 207 aa11.46□□□□□ -0.58
VAMP4-203ENST00000474047 GNG12Q9UBI6 72 aa11.46□□□□□ -0.58
VAMP4-203ENST00000474047 SSR3Q9UNL2 185 aa11.46□□□□□ -0.58
VAMP4-203ENST00000474047 IGHV3-43A0A0B4J1X8 118 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 A0A1W2PPE3 182 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 A6NDX4 124 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 OOSP1A8MZH6 123 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 C15orf65H3BRN8 121 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 IGHV3-43DP0DP04 118 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 RAB3BP20337 219 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 CHATP28329 748 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 NEDD8Q15843 81 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 C2orf76Q3KRA6 126 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 KCTD21Q4G0X4 260 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 UTF1Q5T230 341 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 CD200R1LQ6Q8B3 271 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 C6orf201Q7Z4U5 140 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 WFDC12Q8WWY7 111 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 SULT4A1Q9BR01 284 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 NICN1Q9BSH3 213 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 RANBP3Q9H6Z4 567 aaPredicted RBP11.45□□□□□ -0.58
VAMP4-203ENST00000474047 STEAP1Q9UHE8 339 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 STUB1Q9UNE7 303 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 TENM1Q9UKZ4 2725 aa11.45□□□□□ -0.58
VAMP4-203ENST00000474047 C12orf77C9JDV5 145 aa11.44□□□□□ -0.58
VAMP4-203ENST00000474047 CHST1O43916 411 aa11.44□□□□□ -0.58
VAMP4-203ENST00000474047 HBZP02008 142 aa11.44□□□□□ -0.58
VAMP4-203ENST00000474047 RCC1P18754 421 aaPredicted RBP11.44□□□□□ -0.58
VAMP4-203ENST00000474047 CD24P25063 80 aa11.44□□□□□ -0.58
VAMP4-203ENST00000474047 QRFPP83859 136 aa11.44□□□□□ -0.58
VAMP4-203ENST00000474047 SETD6Q8TBK2 473 aa11.44□□□□□ -0.58
VAMP4-203ENST00000474047 AKR1E2Q96JD6 320 aa11.44□□□□□ -0.58
VAMP4-203ENST00000474047 TAF9BQ9HBM6 251 aa11.44□□□□□ -0.58
VAMP4-203ENST00000474047 GFOD1Q9NXC2 390 aa11.44□□□□□ -0.58
VAMP4-203ENST00000474047 PEX14O75381 377 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 IL3RAP26951 378 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 KIR2DS4P43632 304 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 VEGFCP49767 419 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 OR10A3P58181 314 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 TMEM30BQ3MIR4 351 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 CCBE1Q6UXH8 406 aaPredicted RBP11.43□□□□□ -0.58
VAMP4-203ENST00000474047 OR1L1Q8NH94 360 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 MRPL30Q8TCC3 161 aaKnown RBP11.43□□□□□ -0.58
VAMP4-203ENST00000474047 PRSS22Q9GZN4 317 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 LPAR5Q9H1C0 372 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 VCX3AQ9NNX9 186 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 OR2S2Q9NQN1 319 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 ABRACLQ9P1F3 81 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 FBLN5Q9UBX5 448 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 RAB22AQ9UL26 194 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 IFITM5A6NNB3 132 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 LY6LH3BQJ8 138 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 SOCS1O15524 211 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 FAM106CPP0CH98 169 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 RAB7AP51149 207 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 SRSF4Q08170 494 aaKnown RBP11.43□□□□□ -0.58
VAMP4-203ENST00000474047 C11orf88Q6PI97 169 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 Q6ZTK2 550 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 GAPTQ8N292 157 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 OR56B1Q8NGI3 324 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 OR10V1Q8NGI7 309 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 GALMQ96C23 342 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 TXNL4BQ9NX01 149 aaKnown RBP11.43□□□□□ -0.58
VAMP4-203ENST00000474047 SIGLEC9Q9Y336 463 aa11.43□□□□□ -0.58
VAMP4-203ENST00000474047 GAPDHP04406 335 aaKnown RBP11.42□□□□□ -0.58
VAMP4-203ENST00000474047 LPLP06858 475 aa11.42□□□□□ -0.58
VAMP4-203ENST00000474047 FGF9P31371 208 aaPredicted RBP11.42□□□□□ -0.58
VAMP4-203ENST00000474047 LOXL3P58215 753 aa11.42□□□□□ -0.58
VAMP4-203ENST00000474047 PROK1P58294 105 aa11.42□□□□□ -0.58
VAMP4-203ENST00000474047 MRPS15P82914 257 aaKnown RBP11.42□□□□□ -0.58
VAMP4-203ENST00000474047 HES1Q14469 280 aa11.42□□□□□ -0.58
VAMP4-203ENST00000474047 MOB3BQ86TA1 216 aa11.42□□□□□ -0.58
VAMP4-203ENST00000474047 ZNF554Q86TJ5 538 aa11.42□□□□□ -0.58
VAMP4-203ENST00000474047 OCSTAMPQ9BR26 566 aa11.42□□□□□ -0.58
VAMP4-203ENST00000474047 RIMS4Q9H426 269 aaPredicted RBP11.42□□□□□ -0.58
VAMP4-203ENST00000474047 A0A0A6YYD4 124 aa11.41□□□□□ -0.58
VAMP4-203ENST00000474047 LOC100506127A0A0U1RQW1 187 aa11.41□□□□□ -0.58
VAMP4-203ENST00000474047 TMEM272A0A1B0GTI8 110 aa11.41□□□□□ -0.58
VAMP4-203ENST00000474047 SMIM30A4D0T7 59 aa11.41□□□□□ -0.58
VAMP4-203ENST00000474047 TNFAIP8O95379 198 aa11.41□□□□□ -0.58
VAMP4-203ENST00000474047 C16orf82Q7Z2V1 217 aa11.41□□□□□ -0.58
VAMP4-203ENST00000474047 TPRA1Q86W33 373 aa11.41□□□□□ -0.58
VAMP4-203ENST00000474047 OR8H3Q8N146 312 aa11.41□□□□□ -0.58
VAMP4-203ENST00000474047 FAM89BQ8N5H3 189 aa11.41□□□□□ -0.58
VAMP4-203ENST00000474047 DRAM1Q8N682 238 aa11.41□□□□□ -0.58
VAMP4-203ENST00000474047 CHCHD6Q9BRQ6 235 aa11.41□□□□□ -0.58
VAMP4-203ENST00000474047 SLC25A33Q9BSK2 321 aa11.41□□□□□ -0.58
VAMP4-203ENST00000474047 MBNL3Q9NUK0 354 aaKnown RBP11.41□□□□□ -0.58
VAMP4-203ENST00000474047 A0A087WXM4 84 aa11.4□□□□□ -0.58
VAMP4-203ENST00000474047 SHISA3A0PJX4 238 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms