RNA–Protein interactions for RNA: ENST00000472815.5

HIF3A-206, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 1,709 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-206ENST00000472815 DLL4Q9NR61 685 aa12.21□□□□□ -0.45
HIF3A-206ENST00000472815 PIGBOS1A0A0B4J2F0 54 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 IGKV1-6A0A0C4DH72 117 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 ODAMA1E959 279 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 CRYM-AS1A6NIL9 109 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 SIGLEC5O15389 551 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 GYPAP02724 150 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 GLIPR1P48060 266 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 P2RX3P56373 397 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 EDDM3BP56851 147 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 FAM201AQ5SY85 155 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 NOXA1Q86UR1 476 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 ZNRF1Q8ND25 227 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 SECTM1Q8WVN6 248 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 TMEM230Q96A57 120 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 HYLS1Q96M11 299 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 SLC5A7Q9GZV3 580 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 SLC2A9Q9NRM0 540 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 RBM7Q9Y580 266 aaKnown RBP12.2□□□□□ -0.46
HIF3A-206ENST00000472815 GPR31O00270 319 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 LUMP51884 338 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-206ENST00000472815 CLEC18BQ6UXF7 455 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 MRGPRDQ8TDS7 321 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 FAM216AQ8WUB2 273 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 NEU4Q8WWR8 484 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-206ENST00000472815 RTN4IP1Q8WWV3 396 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-206ENST00000472815 C14orf79Q96F83 325 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 GAFA1Q96PS6 74 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 MAB21L2Q9Y586 359 aa12.2□□□□□ -0.46
HIF3A-206ENST00000472815 KLF2Q9Y5W3 355 aaPredicted RBP12.2□□□□□ -0.46
HIF3A-206ENST00000472815 RAI1Q7Z5J4 1906 aaPredicted RBP12.19□□□□□ -0.46
HIF3A-206ENST00000472815 DSCAMO60469 2012 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 C12orf77C9JDV5 145 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 TMPRSS2O15393 492 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 SNAPC5O75971 98 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 RGS11O94810 467 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 OR2A4O95047 310 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 ZNF205O95201 554 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 FSTL3O95633 263 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 HBZP02008 142 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 TFF1P04155 84 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 HLA-GP17693 338 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 MEX3BQ6ZN04 569 aaKnown RBP12.19□□□□□ -0.46
HIF3A-206ENST00000472815 KCTD9Q7L273 389 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 DTX2Q86UW9 622 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 OR10V1Q8NGI7 309 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 ARL11Q969Q4 196 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 GALNT14Q96FL9 552 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 OR2A7Q96R45 310 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 CCL13Q99616 98 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 SUCNR1Q9BXA5 334 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 NAA60Q9H7X0 242 aa12.19□□□□□ -0.46
HIF3A-206ENST00000472815 USP9XQ93008 2570 aaPredicted RBP12.18□□□□□ -0.46
HIF3A-206ENST00000472815 KIAA2026Q5HYC2 2103 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 TRGV10A0A0A0MS01 117 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 TRAV39A0A0B4J263 110 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 A6NNC1 897 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 HEXAP06865 529 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 CEACAM6P40199 344 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 RND3P61587 244 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 SRPXP78539 464 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 MRPS11P82912 194 aaKnown RBP12.18□□□□□ -0.46
HIF3A-206ENST00000472815 HTD2P86397 168 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 SLC9A3R2Q15599 337 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 CR1LQ2VPA4 569 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 OR5M8Q8NGP6 311 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 OR13A1Q8NGR1 328 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 OR2T35Q8NGX2 323 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 PDCD10Q9BUL8 212 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 CHIAQ9BZP6 476 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 RAB18Q9NP72 206 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 RDH8Q9NYR8 311 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 LPAR3Q9UBY5 353 aa12.18□□□□□ -0.46
HIF3A-206ENST00000472815 ABCA4P78363 2273 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 B3GALNT1O75752 331 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 GZMKP49863 264 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 SUPT4H1P63272 117 aaKnown RBP12.17□□□□□ -0.46
HIF3A-206ENST00000472815 CYCSP99999 105 aaKnown RBP12.17□□□□□ -0.46
HIF3A-206ENST00000472815 FGL1Q08830 312 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 TMEM30BQ3MIR4 351 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 PHLDA2Q53GA4 152 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 LRRC10Q5BKY1 277 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 C11orf71Q6IPW1 123 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 NLRC3Q7RTR2 1065 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 TPRX1Q8N7U7 411 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 AKR1E2Q96JD6 320 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 OR1A1Q9P1Q5 309 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 SLC25A10Q9UBX3 287 aaPredicted RBP12.17□□□□□ -0.46
HIF3A-206ENST00000472815 DOPEY1Q5JWR5 2465 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 HELZ2Q9BYK8 2649 aaKnown RBP12.17□□□□□ -0.46
HIF3A-206ENST00000472815 hADV38S2A0JD32 116 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 CLEC18AA5D8T8 446 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 C19orf84I3L1E1 186 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 NDUFB3O43676 98 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 DANCRP0C864 163 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 RPS2P15880 293 aaKnown RBP12.17□□□□□ -0.46
HIF3A-206ENST00000472815 DNASE1P24855 282 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 GNRHRP30968 328 aa12.17□□□□□ -0.46
HIF3A-206ENST00000472815 MEF2CQ06413 473 aaPredicted RBP12.17□□□□□ -0.46
HIF3A-206ENST00000472815 GSG1LQ6UXU4 331 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms