RNA–Protein interactions for RNA: ENST00000472806.1

CCDC171-205, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-205ENST00000472806 RHBDL1O75783 438 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 HAND1O96004 215 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 IGLV1-44P01699 117 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 FAM157CP0CG43 387 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 LMO1P25800 156 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 NOVA1P51513 510 aaKnown RBP6.46□□□□□ -1.38
CCDC171-205ENST00000472806 CAV2P51636 162 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 RPS23P62266 143 aaKnown RBP6.46□□□□□ -1.38
CCDC171-205ENST00000472806 RPL23AP62750 156 aaKnown RBP6.46□□□□□ -1.38
CCDC171-205ENST00000472806 DEFA5Q01523 94 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 PSG7Q13046 419 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 ZNF154Q13106 437 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 HERPUD1Q15011 391 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 SMIM21Q3B7S5 101 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 KRTCAP3Q53RY4 240 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 PXDC1Q5TGL8 231 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 ZNF324BQ6AW86 544 aaPredicted RBP6.46□□□□□ -1.38
CCDC171-205ENST00000472806 SLC35E4Q6ICL7 350 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 PCSK4Q6UW60 755 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 Q6ZPA2 131 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 ZNF818PQ6ZRF7 136 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 FAM90A1Q86YD7 464 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 OR2C3Q8N628 320 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 TCTEX1D1Q8N7M0 179 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 WDR31Q8NA23 367 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 LFNGQ8NES3 379 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 PPP1R35Q8TAP8 253 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 LSM10Q969L4 123 aaKnown RBP6.46□□□□□ -1.38
CCDC171-205ENST00000472806 ZNF488Q96MN9 340 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 TSNAXQ99598 290 aaKnown RBP6.46□□□□□ -1.38
CCDC171-205ENST00000472806 GINS3Q9BRX5 216 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 TLNRD1Q9H1K6 362 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 SEBOXQ9HB31 216 aaPredicted RBP6.46□□□□□ -1.38
CCDC171-205ENST00000472806 HES4Q9HCC6 221 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 RAB9BQ9NP90 201 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 TREM1Q9NP99 234 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 CCL28Q9NRJ3 127 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 MBNL3Q9NUK0 354 aaKnown RBP6.46□□□□□ -1.38
CCDC171-205ENST00000472806 IL36RNQ9UBH0 155 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 MYO7BQ6PIF6 2116 aa6.46□□□□□ -1.38
CCDC171-205ENST00000472806 IGKV1D-13A0A0B4J2D9 117 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 NKX2-6A6NCS4 301 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 OOEPA6NGQ2 149 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 A6NLC8 198 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 UMAD1C9J7I0 102 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 F8W036 122 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP6.45□□□□□ -1.38
CCDC171-205ENST00000472806 CDIPTO14735 213 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 ADAM20O43506 726 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 SCO1O75880 301 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 DFFBO76075 338 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 SCAF4O95104 1147 aaKnown RBP6.45□□□□□ -1.38
CCDC171-205ENST00000472806 ZNF205O95201 554 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 SNAPINO95295 136 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 GRPP07492 148 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 CELA3BP08861 270 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 CECR9P0C854 216 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 IGKV1-13P0DP09 117 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 NBL1P41271 181 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 RAB2AP61019 212 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 EWSR1Q01844 656 aaKnown RBP eCLIP6.45□□□□□ -1.38
CCDC171-205ENST00000472806 ID3Q02535 119 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 CATR1Q13166 79 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 PEA15Q15121 130 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 IGFBP7Q16270 282 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 NMSQ5H8A3 153 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 TIMM23BQ5SRD1 257 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 C1orf185Q5T7R7 199 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 VWA1Q6PCB0 445 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 Q6ZS92 163 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 SSX8Q7RTT4 187 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 CXorf67Q86X51 503 aaPredicted RBP6.45□□□□□ -1.38
CCDC171-205ENST00000472806 STX12Q86Y82 276 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 OR52M1Q8NGK5 317 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 OR10Z1Q8NGY1 313 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 LHFPL5Q8TAF8 219 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 IL1F10Q8WWZ1 152 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 NINJ1Q92982 152 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 GALMQ96C23 342 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 MUCL1Q96DR8 90 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 GNPNAT1Q96EK6 184 aaPredicted RBP6.45□□□□□ -1.38
CCDC171-205ENST00000472806 LRRC46Q96FV0 321 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 RAB40CQ96S21 281 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 PBDC1Q9BVG4 233 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 SFXN3Q9BWM7 321 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 C1QTNF6Q9BXI9 259 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 SEC11CQ9BY50 192 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 NKX6-2Q9C056 277 aaPredicted RBP6.45□□□□□ -1.38
CCDC171-205ENST00000472806 ZNF71Q9NQZ8 489 aaPredicted RBP6.45□□□□□ -1.38
CCDC171-205ENST00000472806 LYRM2Q9NU23 88 aaPredicted RBP6.45□□□□□ -1.38
CCDC171-205ENST00000472806 ERRFI1Q9UJM3 462 aaPredicted RBP6.45□□□□□ -1.38
CCDC171-205ENST00000472806 WASF3Q9UPY6 502 aa6.45□□□□□ -1.38
CCDC171-205ENST00000472806 CARHSP1Q9Y2V2 147 aaKnown RBP6.45□□□□□ -1.38
CCDC171-205ENST00000472806 IGHV2OR16-5A0A0B4J2B6 119 aa6.44□□□□□ -1.38
CCDC171-205ENST00000472806 IGKV1-6A0A0C4DH72 117 aa6.44□□□□□ -1.38
CCDC171-205ENST00000472806 A0A1W2PR80 420 aa6.44□□□□□ -1.38
CCDC171-205ENST00000472806 BTBD17A6NE02 478 aa6.44□□□□□ -1.38
CCDC171-205ENST00000472806 FAM90A26D6RGX4 464 aa6.44□□□□□ -1.38
CCDC171-205ENST00000472806 FBXO24O75426 580 aa6.44□□□□□ -1.38
CCDC171-205ENST00000472806 TNFSF13O75888 250 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms