RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 SCN3BQ9NY72 215 aa16.66■□□□□ 0.26
SREBF1-210ENST00000471445 GHRLQ9UBU3 117 aa16.66■□□□□ 0.26
SREBF1-210ENST00000471445 IGHV3-43A0A0B4J1X8 118 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 PTGES3LE9PB15 166 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 G3V4G9 280 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 CA11O75493 328 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 IGHV3-43DP0DP04 118 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 TMEM11P17152 192 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 TMEM30BQ3MIR4 351 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 TCTEX1D4Q5JR98 221 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 C6orf183Q5T699 404 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 SYT6Q5T7P8 510 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-210ENST00000471445 FAM53AQ6NSI3 398 aaPredicted RBP16.65■□□□□ 0.26
SREBF1-210ENST00000471445 LRRTM1Q86UE6 522 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 C5orf56Q8N8D9 126 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 OR4K15Q8NH41 348 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 PHYHIPQ92561 330 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 R3HDM4Q96D70 268 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 CYYR1Q96J86 154 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 TMED9Q9BVK6 235 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 TRAPPC2LQ9UL33 140 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 PEX16Q9Y5Y5 336 aa16.65■□□□□ 0.26
SREBF1-210ENST00000471445 IGHV1-3A0A0C4DH29 117 aa16.64■□□□□ 0.25
SREBF1-210ENST00000471445 FGF16O43320 207 aa16.64■□□□□ 0.25
SREBF1-210ENST00000471445 IGKV1D-33P01593 117 aa16.64■□□□□ 0.25
SREBF1-210ENST00000471445 IGKV1-33P01594 117 aa16.64■□□□□ 0.25
SREBF1-210ENST00000471445 GLAP06280 429 aa16.64■□□□□ 0.25
SREBF1-210ENST00000471445 MYF6P23409 242 aa16.64■□□□□ 0.25
SREBF1-210ENST00000471445 VHLP40337 213 aa16.64■□□□□ 0.25
SREBF1-210ENST00000471445 HES1Q14469 280 aa16.64■□□□□ 0.25
SREBF1-210ENST00000471445 MED22Q15528 200 aa16.64■□□□□ 0.25
SREBF1-210ENST00000471445 RBM48Q5RL73 367 aaKnown RBP16.64■□□□□ 0.25
SREBF1-210ENST00000471445 KPRPQ5T749 579 aaPredicted RBP16.64■□□□□ 0.25
SREBF1-210ENST00000471445 TRAT1Q6PIZ9 186 aa16.64■□□□□ 0.25
SREBF1-210ENST00000471445 IZUMO1Q8IYV9 350 aa16.64■□□□□ 0.25
SREBF1-210ENST00000471445 ZNF439Q8NDP4 499 aa16.64■□□□□ 0.25
SREBF1-210ENST00000471445 FAM46BQ96A09 425 aa16.64■□□□□ 0.25
SREBF1-210ENST00000471445 ANKRD60Q9BZ19 345 aa16.64■□□□□ 0.25
SREBF1-210ENST00000471445 CST11Q9H112 138 aa16.64■□□□□ 0.25
SREBF1-210ENST00000471445 RAB9BQ9NP90 201 aa16.64■□□□□ 0.25
SREBF1-210ENST00000471445 H0YHG0 523 aa16.63■□□□□ 0.25
SREBF1-210ENST00000471445 CCRL2O00421 344 aa16.63■□□□□ 0.25
SREBF1-210ENST00000471445 PDCD6O75340 191 aa16.63■□□□□ 0.25
SREBF1-210ENST00000471445 GAPDHP04406 335 aaKnown RBP16.63■□□□□ 0.25
SREBF1-210ENST00000471445 UBBP0CG47 229 aa16.63■□□□□ 0.25
SREBF1-210ENST00000471445 FUT3P21217 361 aa16.63■□□□□ 0.25
SREBF1-210ENST00000471445 EBI3Q14213 229 aa16.63■□□□□ 0.25
SREBF1-210ENST00000471445 C9orf152Q5JTZ5 239 aa16.63■□□□□ 0.25
SREBF1-210ENST00000471445 C1orf100Q5SVJ3 147 aa16.63■□□□□ 0.25
SREBF1-210ENST00000471445 CENPVQ7Z7K6 275 aaPredicted RBP16.63■□□□□ 0.25
SREBF1-210ENST00000471445 OR4X2Q8NGF9 303 aa16.63■□□□□ 0.25
SREBF1-210ENST00000471445 ST6GALNAC6Q969X2 333 aa16.63■□□□□ 0.25
SREBF1-210ENST00000471445 DUSP21Q9H596 190 aa16.63■□□□□ 0.25
SREBF1-210ENST00000471445 MBNL3Q9NUK0 354 aaKnown RBP16.63■□□□□ 0.25
SREBF1-210ENST00000471445 TPRKBQ9Y3C4 175 aa16.63■□□□□ 0.25
SREBF1-210ENST00000471445 SLC31A2O15432 143 aa16.62■□□□□ 0.25
SREBF1-210ENST00000471445 SPINT2O43291 252 aa16.62■□□□□ 0.25
SREBF1-210ENST00000471445 HBZP02008 142 aa16.62■□□□□ 0.25
SREBF1-210ENST00000471445 IL3RAP26951 378 aa16.62■□□□□ 0.25
SREBF1-210ENST00000471445 REG1BP48304 166 aa16.62■□□□□ 0.25
SREBF1-210ENST00000471445 ZNF137PP52743 207 aa16.62■□□□□ 0.25
SREBF1-210ENST00000471445 GLT8D1Q68CQ7 371 aa16.62■□□□□ 0.25
SREBF1-210ENST00000471445 C10orf99Q6UWK7 81 aa16.62■□□□□ 0.25
SREBF1-210ENST00000471445 SLC25A48Q6ZT89 311 aaKnown RBP16.62■□□□□ 0.25
SREBF1-210ENST00000471445 UFD1Q92890 307 aa16.62■□□□□ 0.25
SREBF1-210ENST00000471445 MPIG6BO95866 241 aa16.61■□□□□ 0.25
SREBF1-210ENST00000471445 UCHL1P09936 223 aa16.61■□□□□ 0.25
SREBF1-210ENST00000471445 VSIG8P0DPA2 414 aa16.61■□□□□ 0.25
SREBF1-210ENST00000471445 CD37P11049 281 aa16.61■□□□□ 0.25
SREBF1-210ENST00000471445 RCC1P18754 421 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-210ENST00000471445 HSD17B12Q53GQ0 312 aa16.61■□□□□ 0.25
SREBF1-210ENST00000471445 ZNF554Q86TJ5 538 aa16.61■□□□□ 0.25
SREBF1-210ENST00000471445 Q8N6K4 173 aa16.61■□□□□ 0.25
SREBF1-210ENST00000471445 OR1L1Q8NH94 360 aa16.61■□□□□ 0.25
SREBF1-210ENST00000471445 MRPL30Q8TCC3 161 aaKnown RBP16.61■□□□□ 0.25
SREBF1-210ENST00000471445 RTN4IP1Q8WWV3 396 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-210ENST00000471445 GNG12Q9UBI6 72 aa16.61■□□□□ 0.25
SREBF1-210ENST00000471445 TSSC4Q9Y5U2 329 aaPredicted RBP16.61■□□□□ 0.25
SREBF1-210ENST00000471445 IGHV3-72A0A0B4J1Y9 119 aa16.6■□□□□ 0.25
SREBF1-210ENST00000471445 A0A1W2PRX2 142 aa16.6■□□□□ 0.25
SREBF1-210ENST00000471445 UBE2QL1A1L167 161 aa16.6■□□□□ 0.25
SREBF1-210ENST00000471445 CHATP28329 748 aa16.6■□□□□ 0.25
SREBF1-210ENST00000471445 HNF4GQ14541 408 aa16.6■□□□□ 0.25
SREBF1-210ENST00000471445 LIPKQ5VXJ0 399 aa16.6■□□□□ 0.25
SREBF1-210ENST00000471445 OR10K2Q6IF99 312 aa16.6■□□□□ 0.25
SREBF1-210ENST00000471445 CEACAM19Q7Z692 300 aa16.6■□□□□ 0.25
SREBF1-210ENST00000471445 MOB3BQ86TA1 216 aa16.6■□□□□ 0.25
SREBF1-210ENST00000471445 PRR18Q8N4B5 295 aa16.6■□□□□ 0.25
SREBF1-210ENST00000471445 OR10V1Q8NGI7 309 aa16.6■□□□□ 0.25
SREBF1-210ENST00000471445 EAF1Q96JC9 268 aaPredicted RBP16.6■□□□□ 0.25
SREBF1-210ENST00000471445 TM2D1Q9BX74 207 aa16.6■□□□□ 0.25
SREBF1-210ENST00000471445 TMEM59Q9BXS4 323 aa16.6■□□□□ 0.25
SREBF1-210ENST00000471445 TCRBV4S1A1TA0A5B7 111 aa16.59■□□□□ 0.25
SREBF1-210ENST00000471445 SLC22A1O15245 554 aa16.59■□□□□ 0.25
SREBF1-210ENST00000471445 TXNL1O43396 289 aa16.59■□□□□ 0.25
SREBF1-210ENST00000471445 RGS10O43665 173 aa16.59■□□□□ 0.25
SREBF1-210ENST00000471445 SRMP19623 302 aa16.59■□□□□ 0.25
SREBF1-210ENST00000471445 ZNF134P52741 427 aa16.59■□□□□ 0.25
SREBF1-210ENST00000471445 RPS27AP62979 156 aaKnown RBP16.59■□□□□ 0.25
SREBF1-210ENST00000471445 UNC119Q13432 240 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms