RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 SUMF2Q8NBJ7 301 aa7□□□□□ -1.29
CCDC171-204ENST00000470191 OR10A7Q8NGE5 316 aa7□□□□□ -1.29
CCDC171-204ENST00000470191 OR2G2Q8NGZ5 317 aa7□□□□□ -1.29
CCDC171-204ENST00000470191 IL17DQ8TAD2 202 aa7□□□□□ -1.29
CCDC171-204ENST00000470191 NEK7Q8TDX7 302 aa7□□□□□ -1.29
CCDC171-204ENST00000470191 DDB2Q92466 427 aa7□□□□□ -1.29
CCDC171-204ENST00000470191 RITA1Q96K30 269 aa7□□□□□ -1.29
CCDC171-204ENST00000470191 GPER1Q99527 375 aa7□□□□□ -1.29
CCDC171-204ENST00000470191 DPCDQ9BVM2 203 aaPredicted RBP7□□□□□ -1.29
CCDC171-204ENST00000470191 ANKRD60Q9BZ19 345 aa7□□□□□ -1.29
CCDC171-204ENST00000470191 PRRG3Q9BZD7 231 aa7□□□□□ -1.29
CCDC171-204ENST00000470191 FAM192AQ9GZU8 254 aa7□□□□□ -1.29
CCDC171-204ENST00000470191 LINC00574Q9H8X3 128 aa7□□□□□ -1.29
CCDC171-204ENST00000470191 GFOD1Q9NXC2 390 aa7□□□□□ -1.29
CCDC171-204ENST00000470191 FRRS1LQ9P0K9 344 aa7□□□□□ -1.29
CCDC171-204ENST00000470191 STUB1Q9UNE7 303 aa7□□□□□ -1.29
CCDC171-204ENST00000470191 MRPS28Q9Y2Q9 187 aaKnown RBP7□□□□□ -1.29
CCDC171-204ENST00000470191 FBXO7Q9Y3I1 522 aa7□□□□□ -1.29
CCDC171-204ENST00000470191 IGHV7-81A0A0B4J1V7 117 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 SOX15O60248 233 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 SNX3O60493 162 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 SULT1C4O75897 302 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 FAM107AO95990 144 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 IGLV1-51P01701 117 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 HTR1AP08908 422 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 DBTP11182 482 aaKnown RBP6.99□□□□□ -1.29
CCDC171-204ENST00000470191 NANOS3P60323 173 aaKnown RBP6.99□□□□□ -1.29
CCDC171-204ENST00000470191 ACTBP60709 375 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 ZNF85Q03923 595 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 LSAMPQ13449 338 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 GALEQ14376 348 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 RSU1Q15404 277 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 LRRC36Q1X8D7 754 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 ATAD3CQ5T2N8 411 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 ZNF691Q5VV52 312 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 LINC00528Q8N1L1 170 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 LINC00311Q8N616 119 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 TNFAIP8L1Q8WVP5 186 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 LINC00476Q8WZB0 136 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 ZNF251Q9BRH9 671 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 RHOFQ9HBH0 211 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 TPSG1Q9NRR2 321 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 GNG12Q9UBI6 72 aa6.99□□□□□ -1.29
CCDC171-204ENST00000470191 WARS2Q9UGM6 360 aaKnown RBP6.99□□□□□ -1.29
CCDC171-204ENST00000470191 TMEM30CPA0ZSE6 113 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 ANKRD34BA5PLL1 514 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 FAM90A10PA6NDY2 464 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 A8MZ25 164 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 C15orf65H3BRN8 121 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 TXNL1O43396 289 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 OR7C1O76099 320 aaPredicted RBP6.98□□□□□ -1.29
CCDC171-204ENST00000470191 BRI3O95415 125 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 MT-ND2P03891 347 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 CSTBP04080 98 aaKnown RBP6.98□□□□□ -1.29
CCDC171-204ENST00000470191 HSPB1P04792 205 aaKnown RBP6.98□□□□□ -1.29
CCDC171-204ENST00000470191 FSTP19883 344 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 GZMHP20718 246 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 ZNF134P52741 427 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 TPPP2P59282 170 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 NDPQ00604 133 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 PMS2P11Q13670 270 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 HSP90B2PQ58FF3 399 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 CT45A1Q5HYN5 189 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 C12orf73Q69YU5 71 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 LIN54Q6MZP7 749 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 SLC25A48Q6ZT89 311 aaKnown RBP6.98□□□□□ -1.29
CCDC171-204ENST00000470191 GTSCR1Q86UQ5 136 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 SPATA24Q86W54 205 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 MINDY2Q8NBR6 621 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 CT45A3Q8NHU0 189 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 FLYWCH2Q96CP2 140 aaKnown RBP6.98□□□□□ -1.29
CCDC171-204ENST00000470191 NCOR1P1Q9H4R4 102 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 PLEKHA3Q9HB20 300 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 CHCHD3Q9NX63 227 aaKnown RBP6.98□□□□□ -1.29
CCDC171-204ENST00000470191 ZNF580Q9UK33 172 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 ING4Q9UNL4 249 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 FOXA2Q9Y261 457 aaPredicted RBP6.98□□□□□ -1.29
CCDC171-204ENST00000470191 ST3GAL6Q9Y274 331 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 ERGIC3Q9Y282 383 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 TNCP24821 2201 aa6.98□□□□□ -1.29
CCDC171-204ENST00000470191 ZAR1LA6NP61 321 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 J3QLW9 94 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 AIPO00170 330 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 GABRPO00591 440 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 NBR2O15453 112 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 SULT1B1O43704 296 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 CDRT1O95170 752 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 HLA-DRB1P01911 266 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 ZNF19P17023 458 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 VHLP40337 213 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 EFNB1P98172 346 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 IL13RA2Q14627 380 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 PLGLAQ15195 96 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 C5orf64Q2M2E5 130 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 RNLSQ5VYX0 342 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 ELP2Q6IA86 826 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 FAHD1Q6P587 224 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 C5orf24Q7Z6I8 188 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 ZNF439Q8NDP4 499 aa6.97□□□□□ -1.29
CCDC171-204ENST00000470191 OR52M1Q8NGK5 317 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 547.1 ms