RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 KLK11Q9UBX7 282 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 Q9UFV3 132 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 YARS2Q9Y2Z4 477 aaKnown RBP4.37□□□□□ -1.71
COL3A1-205ENST00000470167 IER3IP1Q9Y5U9 82 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 WDR90Q96KV7 1748 aa4.37□□□□□ -1.71
COL3A1-205ENST00000470167 DUXBA0A1W2PPF3 345 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 PHF1O43189 567 aaPredicted RBP4.36□□□□□ -1.71
COL3A1-205ENST00000470167 GSTZ1O43708 216 aaPredicted RBP4.36□□□□□ -1.71
COL3A1-205ENST00000470167 ZIC3O60481 467 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 DHRS3O75911 302 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 DUS4LO95620 317 aaKnown RBP4.36□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF682O95780 498 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 FAM106CPP0CH98 169 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 PGA4P0DJD7 388 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 PGA5P0DJD9 388 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 CD99P14209 185 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 SRD5A1P18405 259 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 PGCP20142 388 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 LMO1P25800 156 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 GRPRP30550 384 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 PYCR1P32322 319 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 RPL22P35268 128 aaKnown RBP4.36□□□□□ -1.71
COL3A1-205ENST00000470167 NSG1P42857 185 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 ZFP36L2P47974 494 aaKnown RBP4.36□□□□□ -1.71
COL3A1-205ENST00000470167 GLIPR1P48060 266 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 DUSP2Q05923 314 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 FMODQ06828 376 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 KLRD1Q13241 179 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF74Q16587 644 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 C4orf26Q17RF5 130 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 ZSWIM7Q19AV6 140 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 ACOT6Q3I5F7 207 aaPredicted RBP4.36□□□□□ -1.71
COL3A1-205ENST00000470167 FAM106AQ4KMX7 169 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF648Q5T619 568 aaPredicted RBP4.36□□□□□ -1.71
COL3A1-205ENST00000470167 DCAF12Q5T6F0 453 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 SPSB3Q6PJ21 355 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF66Q6ZN08 573 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 Q6ZVH6 145 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 C1QL2Q7Z5L3 287 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 CDC20BQ86Y33 519 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 FAM90A1Q86YD7 464 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 C1orf174Q8IYL3 243 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 MUC20Q8N307 709 aaPredicted RBP4.36□□□□□ -1.71
COL3A1-205ENST00000470167 IQCF1Q8N6M8 205 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 TCEANCQ8N8B7 351 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 GATD1Q8NB37 220 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 OR6K6Q8NGW6 343 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 TMEM170AQ8WVE7 144 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 TMED6Q8WW62 240 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 NUS1Q96E22 293 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 RASL11BQ9BPW5 248 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 MLST8Q9BVC4 326 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 WDR13Q9H1Z4 485 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 RPRMQ9NS64 109 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 C20orf141Q9NUB4 165 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 NDUFB11Q9NX14 153 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 LAMP3Q9UQV4 416 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 TCF19Q9Y242 345 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 SLIT1O75093 1534 aa4.36□□□□□ -1.71
COL3A1-205ENST00000470167 ARAP2Q8WZ64 1704 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 NUP210LQ5VU65 1888 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 TEX48A0A1B0GUV7 120 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 A6NDN8 102 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 C9JAW5 83 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 C9JQL5 133 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 SIRPB1O00241 398 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 XKRYO14609 159 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 TAAR5O14804 337 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 GEMIN2O14893 280 aaKnown RBP4.35□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF217O75362 1048 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 TRAPPC6AO75865 159 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 SFT2D2O95562 160 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 PFN1P07737 140 aaKnown RBP4.35□□□□□ -1.71
COL3A1-205ENST00000470167 SPINK8P0C7L1 97 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 PIPP12273 146 aaPredicted RBP4.35□□□□□ -1.71
COL3A1-205ENST00000470167 LOXP28300 417 aaPredicted RBP4.35□□□□□ -1.71
COL3A1-205ENST00000470167 OR1E2P47887 323 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 HINT1P49773 126 aaPredicted RBP4.35□□□□□ -1.71
COL3A1-205ENST00000470167 GZMMP51124 257 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 WNT3AP56704 352 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 PFN3P60673 137 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 POLR2LP62875 67 aaKnown RBP4.35□□□□□ -1.71
COL3A1-205ENST00000470167 MEF2CQ06413 473 aaPredicted RBP4.35□□□□□ -1.71
COL3A1-205ENST00000470167 IL10RBQ08334 325 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 C1orf61Q13536 156 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 UPP1Q16831 310 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 TP53I3Q53FA7 332 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 SOHLH1Q5JUK2 328 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 PRR31Q5SQ13 230 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 TREML2Q5T2D2 321 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 FNDC7Q5VTL7 733 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 SFXN4Q6P4A7 337 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 Q6Q795 121 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 CD164L2Q6UWJ8 174 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 ENPP7Q6UWV6 458 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 BHLHA9Q7RTU4 235 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 ZNF571Q7Z3V5 609 aaPredicted RBP4.35□□□□□ -1.71
COL3A1-205ENST00000470167 TMEFF1Q8IYR6 380 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 SUMF2Q8NBJ7 301 aa4.35□□□□□ -1.71
COL3A1-205ENST00000470167 OR8G5Q8NG78 346 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms