RNA–Protein interactions for RNA: ENST00000469207.5

HDAC3-204, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-204ENST00000469207 CBR4Q8N4T8 237 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 FAM71E2Q8N5Q1 922 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 RNF152Q8N8N0 203 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 OR52M1Q8NGK5 317 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 OR4K15Q8NH41 348 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 OR1L1Q8NH94 360 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 CT45A3Q8NHU0 189 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 NEK7Q8TDX7 302 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 KCTD7Q96MP8 289 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 SLC29A1Q99808 456 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 ZMAT5Q9UDW3 170 aaKnown RBP9.56□□□□□ -0.88
HDAC3-204ENST00000469207 ORC6Q9Y5N6 252 aa9.56□□□□□ -0.88
HDAC3-204ENST00000469207 C12orf77C9JDV5 145 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 ORC5O43913 435 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 FADS2O95864 444 aaKnown RBP9.55□□□□□ -0.88
HDAC3-204ENST00000469207 IGHG4P01861 327 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 CSTBP04080 98 aaKnown RBP9.55□□□□□ -0.88
HDAC3-204ENST00000469207 VDAC1P21796 283 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 MYF6P23409 242 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 PSMB8P28062 276 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 SOX6P35712 828 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 ETV1P50549 477 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 ADARB1P78563 741 aaKnown RBP9.55□□□□□ -0.88
HDAC3-204ENST00000469207 DCTN2Q13561 401 aaKnown RBP9.55□□□□□ -0.88
HDAC3-204ENST00000469207 SLC22A6Q4U2R8 563 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 SYT6Q5T7P8 510 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-204ENST00000469207 OR2G6Q5TZ20 316 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 ZNF497Q6ZNH5 498 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 SLC25A48Q6ZT89 311 aaKnown RBP9.55□□□□□ -0.88
HDAC3-204ENST00000469207 SBSPONQ8IVN8 264 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 ZNF439Q8NDP4 499 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 APH1BQ8WW43 257 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 TMEM106AQ96A25 262 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 MRPL48Q96GC5 212 aaKnown RBP9.55□□□□□ -0.88
HDAC3-204ENST00000469207 GON7Q9BXV9 100 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 IFT22Q9H7X7 185 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 FAM53CQ9NYF3 392 aa9.55□□□□□ -0.88
HDAC3-204ENST00000469207 ZNF256Q9Y2P7 627 aaPredicted RBP9.55□□□□□ -0.88
HDAC3-204ENST00000469207 EPPK1P58107 5090 aaKnown RBP9.54□□□□□ -0.88
HDAC3-204ENST00000469207 A0A1W2PPK0 400 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 SNTNA6NMZ2 147 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 AIPO00170 330 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 LY86O95711 162 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 LALBAP00709 142 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 RCC1P18754 421 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-204ENST00000469207 PPIFP30405 207 aaKnown RBP9.54□□□□□ -0.88
HDAC3-204ENST00000469207 RASSF2P50749 326 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 GP2P55259 537 aaKnown RBP9.54□□□□□ -0.88
HDAC3-204ENST00000469207 GNB1P62873 340 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 FHL3Q13643 280 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 NHLRC3Q5JS37 347 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 OVCH2Q7RTZ1 564 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 OR1N2Q8NGR9 330 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 GPR148Q8TDV2 347 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 CASTOR1Q8WTX7 329 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 C4orf3Q8WVX3 66 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 ALX4Q9H161 411 aaPredicted RBP9.54□□□□□ -0.88
HDAC3-204ENST00000469207 TMEM138Q9NPI0 162 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 IL36GQ9NZH8 169 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 TENM2Q9NT68 2774 aa9.54□□□□□ -0.88
HDAC3-204ENST00000469207 TRAV8-7A0A075B6U6 113 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 LOC100130705A0A1B0GUX0 176 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 I3L521 148 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 RRP9O43818 475 aaKnown RBP9.53□□□□□ -0.88
HDAC3-204ENST00000469207 CIB2O75838 187 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 HBZP02008 142 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 IGF1P05019 195 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 IL3RAP26951 378 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 BDKRB2P30411 391 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 RAB40BQ12829 278 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 GNMTQ14749 295 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 RPL22L1Q6P5R6 122 aaKnown RBP9.53□□□□□ -0.88
HDAC3-204ENST00000469207 ZNF491Q8N8L2 437 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 C8orf31Q8N9H6 132 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 OR52L2PQ8NGH6 319 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 DCUN1D4Q92564 292 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 CPNE2Q96FN4 548 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-204ENST00000469207 Q96MT0 163 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 S100A13Q99584 98 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 ZNF184Q99676 751 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-204ENST00000469207 BANF2Q9H503 90 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 MRPS18AQ9NVS2 196 aaKnown RBP9.53□□□□□ -0.88
HDAC3-204ENST00000469207 GNG12Q9UBI6 72 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 CLEC2DQ9UHP7 191 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 ZNF107Q9UII5 783 aaPredicted RBP9.53□□□□□ -0.88
HDAC3-204ENST00000469207 TRAPPC2LQ9UL33 140 aa9.53□□□□□ -0.88
HDAC3-204ENST00000469207 UBE2QL1A1L167 161 aa9.52□□□□□ -0.89
HDAC3-204ENST00000469207 C3orf84H3BNL1 204 aa9.52□□□□□ -0.89
HDAC3-204ENST00000469207 CD2P06729 351 aa9.52□□□□□ -0.89
HDAC3-204ENST00000469207 GTF2F2P13984 249 aa9.52□□□□□ -0.89
HDAC3-204ENST00000469207 SNRPBP14678 240 aaKnown RBP9.52□□□□□ -0.89
HDAC3-204ENST00000469207 IGFBP3P17936 291 aaPredicted RBP9.52□□□□□ -0.89
HDAC3-204ENST00000469207 MRPL28Q13084 256 aaKnown RBP9.52□□□□□ -0.89
HDAC3-204ENST00000469207 MMDQ15546 238 aa9.52□□□□□ -0.89
HDAC3-204ENST00000469207 MPV17LQ2QL34 196 aa9.52□□□□□ -0.89
HDAC3-204ENST00000469207 KLHL22Q53GT1 634 aa9.52□□□□□ -0.89
HDAC3-204ENST00000469207 CASC10Q5T4H9 136 aa9.52□□□□□ -0.89
HDAC3-204ENST00000469207 ODF3L1Q8IXM7 274 aa9.52□□□□□ -0.89
HDAC3-204ENST00000469207 ZFP41Q8N8Y5 198 aa9.52□□□□□ -0.89
HDAC3-204ENST00000469207 MYOZ3Q8TDC0 251 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms