RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 PPP5CP53041 499 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 EDDM3BP56851 147 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 KRTAP1-1Q07627 177 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 AESQ08117 197 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 RBM39Q14498 530 aaKnown RBP3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 EDDM3AQ14507 147 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 IL13RA2Q14627 380 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 ATXN7L3Q14CW9 347 aaPredicted RBP3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 GRK1Q15835 563 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 BAK1Q16611 211 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 MPV17LQ2QL34 196 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 TRIQKQ629K1 86 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 SIGIRRQ6IA17 410 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 DUX4L9Q6RFH8 374 aaPredicted RBP3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 BAIAP2L2Q6UXY1 529 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 Q8N402 240 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 FGFRL1Q8N441 504 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM89BQ8N5H3 189 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF525Q8N782 197 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 GVQW1Q8N7I0 195 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM216BQ8N7L0 139 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 TPRX1Q8N7U7 411 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNRF1Q8ND25 227 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 Q8NFD4 153 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 OR4S1Q8NGB4 309 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 OR4K15Q8NH41 348 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 PRSS3P2Q8NHM4 247 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 UBALD1Q8TB05 177 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 PLPPR1Q8TBJ4 325 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 NUDCD2Q8WVJ2 157 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 IGFBPL1Q8WX77 278 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 ST8SIA4Q92187 359 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 H1FXQ92522 213 aaKnown RBP3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 RAB1CQ92928 201 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 C14orf79Q96F83 325 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 TIMD4Q96H15 378 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 SOSTQ9BQB4 213 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 TMEM246Q9BRR3 403 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 PIMREGQ9BSJ6 248 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 KRTAP9-8Q9BYQ0 159 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 SRRQ9GZT4 340 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 PPA2Q9H2U2 334 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF665Q9H7R5 613 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 TMEM165Q9HC07 324 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 HES4Q9HCC6 221 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 IFT46Q9NQC8 304 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF701Q9NV72 531 aaPredicted RBP3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 DUX4Q9UBX2 424 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 KLK11Q9UBX7 282 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 TRAPPC2LQ9UL33 140 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 V9GYH0 126 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 ROS1P08922 2347 aa3.38□□□□□ -1.87
TMEM39A-204ENST00000468545 CHD6Q8TD26 2715 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 DYSFO75923 2080 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 MEIKINA0A087WXM9 373 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 A0A0A6YYH2 397 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM90A10PA6NDY2 464 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 A6NJ64 397 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM90A8PA6NJQ4 464 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM90A7PA6NKC0 464 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 FOXI3A8MTJ6 420 aaPredicted RBP3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM90A22PA8MWA6 464 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM90A12PA8MX19 464 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM90A23PA8MXZ1 464 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 IFNL4K9M1U5 179 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 MFNGO00587 321 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 ORC5O43913 435 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 SSX5O60225 188 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 RP2O75695 350 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 PMP2P02689 132 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 CSF3P09919 207 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM90A13PP0C7W8 464 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 FAM90A24PP0C7X0 464 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 GSTT2BP0CG30 244 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 IL7P13232 177 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 RPS2P15880 293 aaKnown RBP3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 MUC1P15941 1255 aaPredicted RBP3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 PTBP1P26599 531 aaKnown RBP eCLIP3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 CHATP28329 748 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 CD40LGP29965 261 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 CFHR2P36980 270 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 MDH2P40926 338 aaKnown RBP3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 ETV6P41212 452 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 NR4A2P43354 598 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 GLIPR1P48060 266 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 TMEM33P57088 247 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 SEC61A1P61619 476 aaKnown RBP3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 BTG1P62324 171 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 ARL6IP1Q15041 203 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF146Q15072 292 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 ZMYND11Q15326 602 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 KCNJ8Q15842 424 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF79Q15937 498 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 LTC4SQ16873 150 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 PNLIPRP3Q17RR3 467 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 ZNF181Q2M3W8 571 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 LRRC10Q5BKY1 277 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 NHLRC3Q5JS37 347 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 KRBOX4Q5JUW0 171 aa3.37□□□□□ -1.87
TMEM39A-204ENST00000468545 SPIN3Q5JUX0 258 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms