RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 GPR12P47775 334 aa19.26■□□□□ 0.67
PTCH1-210ENST00000468211 ZNF134P52741 427 aa19.26■□□□□ 0.67
PTCH1-210ENST00000468211 C11orf87Q6NUJ2 197 aa19.26■□□□□ 0.67
PTCH1-210ENST00000468211 LCNL1Q6ZST4 164 aa19.26■□□□□ 0.67
PTCH1-210ENST00000468211 TGIF2LXQ8IUE1 241 aa19.26■□□□□ 0.67
PTCH1-210ENST00000468211 ZNF439Q8NDP4 499 aa19.26■□□□□ 0.67
PTCH1-210ENST00000468211 CYGBQ8WWM9 190 aa19.26■□□□□ 0.67
PTCH1-210ENST00000468211 GGHQ92820 318 aa19.26■□□□□ 0.67
PTCH1-210ENST00000468211 OR14A2Q96R54 314 aa19.26■□□□□ 0.67
PTCH1-210ENST00000468211 MRPS28Q9Y2Q9 187 aaKnown RBP19.26■□□□□ 0.67
PTCH1-210ENST00000468211 FSTP19883 344 aa19.25■□□□□ 0.67
PTCH1-210ENST00000468211 YIF1BQ5BJH7 314 aa19.25■□□□□ 0.67
PTCH1-210ENST00000468211 SYT6Q5T7P8 510 aaPredicted RBP19.25■□□□□ 0.67
PTCH1-210ENST00000468211 GLIPR1L1Q6UWM5 242 aa19.25■□□□□ 0.67
PTCH1-210ENST00000468211 FOXRED2Q8IWF2 684 aa19.25■□□□□ 0.67
PTCH1-210ENST00000468211 JAGN1Q8N5M9 183 aa19.25■□□□□ 0.67
PTCH1-210ENST00000468211 OR2T10Q8NGZ9 312 aa19.25■□□□□ 0.67
PTCH1-210ENST00000468211 OR4K15Q8NH41 348 aa19.25■□□□□ 0.67
PTCH1-210ENST00000468211 ABCG5Q9H222 651 aa19.25■□□□□ 0.67
PTCH1-210ENST00000468211 PNMA8CA0A1B0GUJ8 204 aa19.24■□□□□ 0.67
PTCH1-210ENST00000468211 MYCNOSP40205 109 aa19.24■□□□□ 0.67
PTCH1-210ENST00000468211 SLC35B1P78383 322 aa19.24■□□□□ 0.67
PTCH1-210ENST00000468211 ADARB1P78563 741 aaKnown RBP19.24■□□□□ 0.67
PTCH1-210ENST00000468211 C5orf24Q7Z6I8 188 aa19.24■□□□□ 0.67
PTCH1-210ENST00000468211 LYPD6Q86Y78 171 aa19.24■□□□□ 0.67
PTCH1-210ENST00000468211 OR10V1Q8NGI7 309 aa19.24■□□□□ 0.67
PTCH1-210ENST00000468211 OR1L1Q8NH94 360 aa19.24■□□□□ 0.67
PTCH1-210ENST00000468211 RAX2Q96IS3 184 aa19.24■□□□□ 0.67
PTCH1-210ENST00000468211 BANF2Q9H503 90 aa19.24■□□□□ 0.67
PTCH1-210ENST00000468211 LIN7CQ9NUP9 197 aaKnown RBP19.24■□□□□ 0.67
PTCH1-210ENST00000468211 CKLFQ9UBR5 152 aa19.24■□□□□ 0.67
PTCH1-210ENST00000468211 MCRIP1C9JLW8 97 aa19.23■□□□□ 0.67
PTCH1-210ENST00000468211 RPLP1P05386 114 aaKnown RBP19.23■□□□□ 0.67
PTCH1-210ENST00000468211 RCC1P18754 421 aaPredicted RBP19.23■□□□□ 0.67
PTCH1-210ENST00000468211 CD1BP29016 333 aa19.23■□□□□ 0.67
PTCH1-210ENST00000468211 VHLP40337 213 aa19.23■□□□□ 0.67
PTCH1-210ENST00000468211 ST3GAL4Q11206 333 aa19.23■□□□□ 0.67
PTCH1-210ENST00000468211 GPR176Q14439 515 aa19.23■□□□□ 0.67
PTCH1-210ENST00000468211 CT45A1Q5HYN5 189 aa19.23■□□□□ 0.67
PTCH1-210ENST00000468211 RAB12Q6IQ22 244 aa19.23■□□□□ 0.67
PTCH1-210ENST00000468211 LAIR2Q6ISS4 152 aa19.23■□□□□ 0.67
PTCH1-210ENST00000468211 SLC25A48Q6ZT89 311 aaKnown RBP19.23■□□□□ 0.67
PTCH1-210ENST00000468211 ZNF695Q8IW36 515 aa19.23■□□□□ 0.67
PTCH1-210ENST00000468211 GAPTQ8N292 157 aa19.23■□□□□ 0.67
PTCH1-210ENST00000468211 STX19Q8N4C7 294 aa19.23■□□□□ 0.67
PTCH1-210ENST00000468211 COMMD1Q8N668 190 aa19.23■□□□□ 0.67
PTCH1-210ENST00000468211 CT45A3Q8NHU0 189 aa19.23■□□□□ 0.67
PTCH1-210ENST00000468211 ETAA1Q9NY74 926 aa19.23■□□□□ 0.67
PTCH1-210ENST00000468211 TRAPPC2LQ9UL33 140 aa19.23■□□□□ 0.67
PTCH1-210ENST00000468211 AP4M1O00189 453 aa19.22■□□□□ 0.67
PTCH1-210ENST00000468211 MOSP00540 346 aa19.22■□□□□ 0.67
PTCH1-210ENST00000468211 HBZP02008 142 aa19.22■□□□□ 0.67
PTCH1-210ENST00000468211 MAS1P04201 325 aa19.22■□□□□ 0.67
PTCH1-210ENST00000468211 VAX1Q5SQQ9 334 aa19.22■□□□□ 0.67
PTCH1-210ENST00000468211 PRR18Q8N4B5 295 aa19.22■□□□□ 0.67
PTCH1-210ENST00000468211 S1PR3Q99500 378 aa19.22■□□□□ 0.67
PTCH1-210ENST00000468211 HSPB9Q9BQS6 159 aa19.22■□□□□ 0.67
PTCH1-210ENST00000468211 CHCHD3Q9NX63 227 aaKnown RBP19.22■□□□□ 0.67
PTCH1-210ENST00000468211 PEX16Q9Y5Y5 336 aa19.22■□□□□ 0.67
PTCH1-210ENST00000468211 NBEAL2Q6ZNJ1 2754 aa19.21■□□□□ 0.67
PTCH1-210ENST00000468211 IL3RAP26951 378 aa19.21■□□□□ 0.67
PTCH1-210ENST00000468211 SLC6A1P30531 599 aa19.21■□□□□ 0.67
PTCH1-210ENST00000468211 ZNF137PP52743 207 aa19.21■□□□□ 0.67
PTCH1-210ENST00000468211 F2RL1P55085 397 aa19.21■□□□□ 0.67
PTCH1-210ENST00000468211 DEFB136Q30KP8 78 aa19.21■□□□□ 0.67
PTCH1-210ENST00000468211 Q3ZCU0 254 aa19.21■□□□□ 0.67
PTCH1-210ENST00000468211 TTC23Q5W5X9 447 aa19.21■□□□□ 0.67
PTCH1-210ENST00000468211 SIGIRRQ6IA17 410 aa19.21■□□□□ 0.67
PTCH1-210ENST00000468211 TEX38Q6PEX7 206 aa19.21■□□□□ 0.67
PTCH1-210ENST00000468211 MRPS24Q96EL2 167 aaKnown RBP19.21■□□□□ 0.67
PTCH1-210ENST00000468211 DERL3Q96Q80 235 aa19.21■□□□□ 0.67
PTCH1-210ENST00000468211 SPACA1Q9HBV2 294 aa19.21■□□□□ 0.67
PTCH1-210ENST00000468211 GNG12Q9UBI6 72 aa19.21■□□□□ 0.67
PTCH1-210ENST00000468211 EBAG9O00559 213 aa19.2■□□□□ 0.66
PTCH1-210ENST00000468211 MGMTP16455 207 aa19.2■□□□□ 0.66
PTCH1-210ENST00000468211 PNLIPRP3Q17RR3 467 aa19.2■□□□□ 0.66
PTCH1-210ENST00000468211 AWAT2Q6E213 333 aa19.2■□□□□ 0.66
PTCH1-210ENST00000468211 FAM71E2Q8N5Q1 922 aa19.2■□□□□ 0.66
PTCH1-210ENST00000468211 DPF1Q92782 380 aa19.2■□□□□ 0.66
PTCH1-210ENST00000468211 GPR61Q9BZJ8 451 aa19.2■□□□□ 0.66
PTCH1-210ENST00000468211 SELENOIQ9C0D9 397 aa19.2■□□□□ 0.66
PTCH1-210ENST00000468211 DCLRE1BQ9H816 532 aa19.2■□□□□ 0.66
PTCH1-210ENST00000468211 KMT2CQ8NEZ4 4911 aaKnown RBP19.2■□□□□ 0.66
PTCH1-210ENST00000468211 UBE2QL1A1L167 161 aa19.19■□□□□ 0.66
PTCH1-210ENST00000468211 H0YHG0 523 aa19.19■□□□□ 0.66
PTCH1-210ENST00000468211 CCL24O00175 119 aa19.19■□□□□ 0.66
PTCH1-210ENST00000468211 SPINT2O43291 252 aa19.19■□□□□ 0.66
PTCH1-210ENST00000468211 GNAO1P09471 354 aa19.19■□□□□ 0.66
PTCH1-210ENST00000468211 CFHR3Q02985 330 aa19.19■□□□□ 0.66
PTCH1-210ENST00000468211 MED21Q13503 144 aa19.19■□□□□ 0.66
PTCH1-210ENST00000468211 GNMTQ14749 295 aa19.19■□□□□ 0.66
PTCH1-210ENST00000468211 DHRSXQ8N5I4 330 aa19.19■□□□□ 0.66
PTCH1-210ENST00000468211 SETD9Q8NE22 299 aa19.19■□□□□ 0.66
PTCH1-210ENST00000468211 Q96M66 194 aa19.19■□□□□ 0.66
PTCH1-210ENST00000468211 MCRIP2Q9BUT9 160 aaKnown RBP19.19■□□□□ 0.66
PTCH1-210ENST00000468211 SC5DO75845 299 aa19.18■□□□□ 0.66
PTCH1-210ENST00000468211 GPR50Q13585 617 aa19.18■□□□□ 0.66
PTCH1-210ENST00000468211 C6orf183Q5T699 404 aa19.18■□□□□ 0.66
PTCH1-210ENST00000468211 CDH26Q8IXH8 852 aa19.18■□□□□ 0.66
PTCH1-210ENST00000468211 RASL11BQ9BPW5 248 aa19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms