RNA–Protein interactions for RNA: ENST00000466379.1

UBE4B-206, Transcript of ubiquitination factor E4B, humanhuman

TSL 2

Gene UBE4B, Length 2,299 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-206ENST00000466379 LMO1P25800 156 aa11.38□□□□□ -0.59
UBE4B-206ENST00000466379 NUP62P37198 522 aaPredicted RBP11.38□□□□□ -0.59
UBE4B-206ENST00000466379 HMGN3Q15651 99 aa11.38□□□□□ -0.59
UBE4B-206ENST00000466379 OR10V1Q8NGI7 309 aa11.38□□□□□ -0.59
UBE4B-206ENST00000466379 LILRB1Q8NHL6 650 aaPredicted RBP11.38□□□□□ -0.59
UBE4B-206ENST00000466379 ITLN1Q8WWA0 313 aa11.38□□□□□ -0.59
UBE4B-206ENST00000466379 MEGF10Q96KG7 1140 aa11.38□□□□□ -0.59
UBE4B-206ENST00000466379 ESRP2Q9H6T0 727 aaKnown RBP11.38□□□□□ -0.59
UBE4B-206ENST00000466379 PCNX1Q96RV3 2341 aa11.38□□□□□ -0.59
UBE4B-206ENST00000466379 NKX2-6A6NCS4 301 aa11.38□□□□□ -0.59
UBE4B-206ENST00000466379 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.38□□□□□ -0.59
UBE4B-206ENST00000466379 DEDDO75618 318 aa11.38□□□□□ -0.59
UBE4B-206ENST00000466379 HKR1P10072 659 aa11.38□□□□□ -0.59
UBE4B-206ENST00000466379 GABRA2P47869 451 aa11.38□□□□□ -0.59
UBE4B-206ENST00000466379 ZNF695Q8IW36 515 aa11.38□□□□□ -0.59
UBE4B-206ENST00000466379 SELENOHQ8IZQ5 122 aaKnown RBP11.38□□□□□ -0.59
UBE4B-206ENST00000466379 ARL6IP6Q8N6S5 226 aa11.38□□□□□ -0.59
UBE4B-206ENST00000466379 OR51H1Q8NH63 302 aa11.38□□□□□ -0.59
UBE4B-206ENST00000466379 CYTL1Q9NRR1 136 aa11.38□□□□□ -0.59
UBE4B-206ENST00000466379 DCAF16Q9NXF7 216 aa11.38□□□□□ -0.59
UBE4B-206ENST00000466379 SPTBN4Q9H254 2564 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 IGLV3-9A0A075B6K5 115 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 TUBAL3A6NHL2 446 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 C12orf77C9JDV5 145 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 K7EPK0 472 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 THBDP07204 575 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 RRASP10301 218 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 CEACAM6P40199 344 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 GLIPR1P48060 266 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 MZT1Q08AG7 82 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 FAM201AQ5SY85 155 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 CLEC9AQ6UXN8 241 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 CMTM1Q8IZ96 169 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 FAM71E2Q8N5Q1 922 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 GCSAMQ8N6F7 178 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 MRGPRDQ8TDS7 321 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 AQP10Q96PS8 301 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 ZC4H2Q9NQZ6 224 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 ELOVL5Q9NYP7 299 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 KCNS2Q9ULS6 477 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 PPP1R3CQ9UQK1 317 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 RBM7Q9Y580 266 aaKnown RBP11.37□□□□□ -0.59
UBE4B-206ENST00000466379 TLN1Q9Y490 2541 aaKnown RBP11.37□□□□□ -0.59
UBE4B-206ENST00000466379 ICE1Q9Y2F5 2266 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 IGLV2-14P01704 120 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 OR8U9P0C7N5 309 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 PSG2P11465 335 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 BPIFB3P59826 476 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 SMCO1Q147U7 214 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 KRBOX4Q5JUW0 171 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 SLC35E4Q6ICL7 350 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 OR52L2PQ8NGH6 319 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 OR8U1Q8NH10 309 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 DCTN5Q9BTE1 182 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 SHARPINQ9H0F6 387 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 OR2S2Q9NQN1 319 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 JKAMPQ9P055 326 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 DNAJB11Q9UBS4 358 aa11.37□□□□□ -0.59
UBE4B-206ENST00000466379 SMG1Q96Q15 3661 aaKnown RBP11.36□□□□□ -0.59
UBE4B-206ENST00000466379 IGKV1D-17A0A075B6S4 117 aa11.36□□□□□ -0.59
UBE4B-206ENST00000466379 DPRXA6NFQ7 191 aa11.36□□□□□ -0.59
UBE4B-206ENST00000466379 SRRM5B3KS81 715 aa11.36□□□□□ -0.59
UBE4B-206ENST00000466379 NPIPB11E5RHQ5 1161 aa11.36□□□□□ -0.59
UBE4B-206ENST00000466379 ABCD4O14678 606 aa11.36□□□□□ -0.59
UBE4B-206ENST00000466379 PRDX2P32119 198 aa11.36□□□□□ -0.59
UBE4B-206ENST00000466379 SNTB1Q13884 538 aaKnown RBP11.36□□□□□ -0.59
UBE4B-206ENST00000466379 EDDM3AQ14507 147 aa11.36□□□□□ -0.59
UBE4B-206ENST00000466379 GNMTQ14749 295 aa11.36□□□□□ -0.59
UBE4B-206ENST00000466379 AANATQ16613 207 aa11.36□□□□□ -0.59
UBE4B-206ENST00000466379 TOR2AQ5JU69 321 aa11.36□□□□□ -0.59
UBE4B-206ENST00000466379 BVESQ8NE79 360 aa11.36□□□□□ -0.59
UBE4B-206ENST00000466379 TMEM56Q96MV1 263 aa11.36□□□□□ -0.59
UBE4B-206ENST00000466379 DNTTIP1Q9H147 329 aa11.36□□□□□ -0.59
UBE4B-206ENST00000466379 KCNIP1Q9NZI2 227 aa11.36□□□□□ -0.59
UBE4B-206ENST00000466379 TMED3Q9Y3Q3 217 aa11.36□□□□□ -0.59
UBE4B-206ENST00000466379 TMEM56-RWDD3S4R434 201 aa11.36□□□□□ -0.59
UBE4B-206ENST00000466379 TRGV8A0A0C4DH27 118 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 I3L521 148 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 ADAM20O43506 726 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 NXPH3O95157 252 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 RPL12P30050 165 aaKnown RBP11.35□□□□□ -0.59
UBE4B-206ENST00000466379 RPS23P62266 143 aaKnown RBP11.35□□□□□ -0.59
UBE4B-206ENST00000466379 SRPXP78539 464 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 TMEM108Q6UXF1 575 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 PDZD9Q8IXQ8 264 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 OR13A1Q8NGR1 328 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 SMIM3Q9BZL3 60 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 CDS2O95674 445 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 HBZP02008 142 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 HEXAP06865 529 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 F2RP25116 425 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 UCP1P25874 307 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 CD80P33681 288 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 SSTR5P35346 364 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 RBPJQ06330 500 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 BSPH1Q075Z2 132 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 OR4D5Q8NGN0 318 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 BSCL2Q96G97 398 aaPredicted RBP11.35□□□□□ -0.59
UBE4B-206ENST00000466379 ZDHHC8Q9ULC8 765 aa11.35□□□□□ -0.59
UBE4B-206ENST00000466379 RNF150Q9ULK6 438 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms