RNA–Protein interactions for RNA: ENST00000465871.1

SSB-207, Transcript of Sjogren syndrome antigen B, humanhuman

TSL 3

Gene SSB, Length 421 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSB-207ENST00000465871 NIPAL1Q6NVV3 410 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 NOXRED1Q6NXP6 359 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 ZNF322Q6U7Q0 402 aaPredicted RBP1.06□□□□□ -2.24
SSB-207ENST00000465871 ZIC4Q8N9L1 334 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 OR11L1Q8NGX0 322 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 MFSD8Q8NHS3 518 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 RNASE11Q8TAA1 199 aaKnown RBP1.06□□□□□ -2.24
SSB-207ENST00000465871 RNASEH2CQ8TDP1 164 aaKnown RBP1.06□□□□□ -2.24
SSB-207ENST00000465871 CCDC12Q8WUD4 166 aaPredicted RBP1.06□□□□□ -2.24
SSB-207ENST00000465871 GTF2H4Q92759 462 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 HIST1H2BAQ96A08 127 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 CMBLQ96DG6 245 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 TMEM56Q96MV1 263 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 OR8B2Q96RD0 313 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 MED10Q9BTT4 135 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 EBPLQ9BY08 206 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 OR2D2Q9H210 308 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 METTL17Q9H7H0 456 aaPredicted RBP1.06□□□□□ -2.24
SSB-207ENST00000465871 SLC23A2Q9UGH3 650 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 FBXL3Q9UKT7 428 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 PHLDA3Q9Y5J5 127 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 FADS3Q9Y5Q0 445 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 NOS1P29475 1434 aa1.06□□□□□ -2.24
SSB-207ENST00000465871 AHNAK2Q8IVF2 5795 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 TRBV24-1A0A075B6N3 115 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 LINC00854A0A1B0GVQ3 168 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 HSBP1L1C9JCN9 74 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 C8orf87E5RJ46 101 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 GPR171O14626 319 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 CYTH3O43739 400 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 GP1BAP07359 652 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 LIMS3P0CW19 117 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 LIMS4P0CW20 117 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 CRABP1P29762 137 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 GABARAPL2P60520 117 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 RAB8AP61006 207 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 XRCC4Q13426 336 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 APOFQ13790 326 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 SYCP1Q15431 976 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 TMEM249Q2WGJ8 235 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 FAM162BQ5T6X4 162 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 TTC33Q6PID6 262 aaPredicted RBP1.05□□□□□ -2.24
SSB-207ENST00000465871 SSX7Q7RTT5 188 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 NIT1Q86X76 327 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 DOLPP1Q86YN1 238 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 KRTCAP2Q8N6L1 136 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 ACBD4Q8NC06 268 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 DTD1Q8TEA8 209 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 KCTD4Q8WVF5 259 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 ATP6V1G3Q96LB4 118 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 PRSS27Q9BQR3 290 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 SLC19A3Q9BZV2 496 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 NDEL1Q9GZM8 345 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 OR51E2Q9H255 320 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 LRRC19Q9H756 370 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 COMMD9Q9P000 198 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 WASHC3Q9Y3C0 194 aa1.05□□□□□ -2.24
SSB-207ENST00000465871 TRPC5OSA6NMA1 111 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 F5H5T6 163 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 SMLR1H3BR10 107 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 TP53I11O14683 189 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 SLC25A20O43772 301 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 MPZL2O60487 215 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 CRTAPO75718 401 aaPredicted RBP1.04□□□□□ -2.24
SSB-207ENST00000465871 EPPINO95925 133 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 ASS1P00966 412 aaKnown RBP1.04□□□□□ -2.24
SSB-207ENST00000465871 PSKH1P11801 424 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 ADORA1P30542 326 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 KDELR2P33947 212 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 PPP1CCP36873 323 aaKnown RBP1.04□□□□□ -2.24
SSB-207ENST00000465871 PSG4Q00888 419 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 SKP2Q13309 424 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 PMS2P3Q13401 168 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 HES1Q14469 280 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 MMDQ15546 238 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 MAPK14Q16539 360 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 ZCWPW2Q504Y3 356 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 CENPWQ5EE01 88 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 RBM48Q5RL73 367 aaKnown RBP1.04□□□□□ -2.24
SSB-207ENST00000465871 C10orf91Q5T1B1 145 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 HENMT1Q5T8I9 393 aaKnown RBP1.04□□□□□ -2.24
SSB-207ENST00000465871 XKRXQ6PP77 449 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 SCXQ7RTU7 201 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 CRLF3Q8IUI8 442 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 ZBTB8OSQ8IWT0 167 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 BOD1L2Q8IYS8 172 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 C17orf78Q8N4C9 275 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 OR5D18Q8NGL1 313 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 OR4P4Q8NGL7 312 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 OR9I1Q8NGQ6 314 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 ZNRF2Q8NHG8 242 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 RORBQ92753 470 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 PPWD1Q96BP3 646 aaKnown RBP1.04□□□□□ -2.24
SSB-207ENST00000465871 FAM210AQ96ND0 272 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 EBNA1BP2Q99848 306 aaKnown RBP1.04□□□□□ -2.24
SSB-207ENST00000465871 ACBD6Q9BR61 282 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 BBS2Q9BXC9 721 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 CHMP4BQ9H444 224 aaKnown RBP1.04□□□□□ -2.24
SSB-207ENST00000465871 ZNF286AQ9HBT8 521 aa1.04□□□□□ -2.24
SSB-207ENST00000465871 MS4A12Q9NXJ0 267 aa1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms