RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 FAM90A13PP0C7W8 464 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 FAM90A24PP0C7X0 464 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 CGB3P0DN86 165 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 CGB7P0DN87 165 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 IGHV1-8P0DP01 117 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 TMEM225BP0DP42 221 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 MYL12AP19105 171 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 RAB3AP20336 220 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 COX7A1P24310 79 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 CRHBPP24387 322 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 TGFBR2P37173 567 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 RAB13P51153 203 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 MRPL28Q13084 256 aaKnown RBP3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 ATXN7L3Q14CW9 347 aaPredicted RBP3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 C17orf58Q2M2W7 97 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 TMEM95Q3KNT9 176 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 Q499Y3 187 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 SPIN3Q5JUX0 258 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 DDI2Q5TDH0 399 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 PRAMEF5Q5TYX0 476 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 ELP2Q6IA86 826 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 C16orf87Q6PH81 154 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 UNQ9370/PRO34162Q6UXP9 181 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 TMEM91Q6ZNR0 172 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 SAXO1Q8IYX7 474 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 TEX29Q8N6K0 151 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 Q8NFD4 153 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 OR4D6Q8NGJ1 314 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 OR51T1Q8NGJ9 327 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 GPR148Q8TDV2 347 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 TNFAIP8L1Q8WVP5 186 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 DYRK2Q92630 601 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 SLC25A28Q96A46 364 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 MRPL48Q96GC5 212 aaKnown RBP3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 CNBD2Q96M20 576 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 DERL3Q96Q80 235 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 MYCBPQ99417 103 aaPredicted RBP3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 GPER1Q99527 375 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 ZNF184Q99676 751 aaPredicted RBP3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 CDCA4Q9BXL8 241 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 ANKRD60Q9BZ19 345 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 DUSP21Q9H596 190 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 METTL8Q9H825 291 aaKnown RBP3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 SEBOXQ9HB31 216 aaPredicted RBP3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 NOX4Q9NPH5 578 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 C1RLQ9NZP8 487 aa3.86□□□□□ -1.79
EXOSC3-204ENST00000465860 IRGMA1A4Y4 181 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 SH2D1BO14796 132 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 GEMIN2O14893 280 aaKnown RBP3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 MYL12BO14950 172 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 CHST1O43916 411 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 GPR137BO60478 399 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 IGHV3-7P01780 117 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 OCMP0CE72 109 aaPredicted RBP3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 ZNF728P0DKX0 622 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 ZNF44P15621 663 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 SERPINA2P20848 420 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 BDKRB2P30411 391 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 ZNF93P35789 620 aaPredicted RBP3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 PTGFRP43088 359 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 P2RX3P56373 397 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 RBM11P57052 281 aaKnown RBP3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 BPIFB3P59826 476 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 RPS25P62851 125 aaKnown RBP3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 ACSM1Q08AH1 577 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 PLA2G7Q13093 441 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 SCGB2A2Q13296 93 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 FHL3Q13643 280 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 DIAPH2-AS1Q14236 149 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 RSU1Q15404 277 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 MED22Q15528 200 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 LY6EQ16553 131 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 YIF1BQ5BJH7 314 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 LIPKQ5VXJ0 399 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 RNLSQ5VYX0 342 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 SIGIRRQ6IA17 410 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 OR10K2Q6IF99 312 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 CCBE1Q6UXH8 406 aaPredicted RBP3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 C12orf54Q6X4T0 127 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 RBMS3Q6XE24 437 aaKnown RBP3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 Q6ZSV7 163 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 GDPD3Q7L5L3 318 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 LRRTM1Q86UE6 522 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 Q8IYB0 196 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 ZSCAN4Q8NAM6 433 aaPredicted RBP3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 SUMF2Q8NBJ7 301 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 TMEM104Q8NE00 496 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 PXT1Q8NFP0 134 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 OR4P4Q8NGL7 312 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 OR13A1Q8NGR1 328 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 UBALD1Q8TB05 177 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 LEAP2Q969E1 77 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 TMEM203Q969S6 136 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 MUL1Q969V5 352 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 ZNF714Q96N38 554 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 TMED9Q9BVK6 235 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 WDR12Q9GZL7 423 aaKnown RBP3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 FAM192AQ9GZU8 254 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 HIPK2Q9H2X6 1198 aa3.85□□□□□ -1.79
EXOSC3-204ENST00000465860 ZNF286AQ9HBT8 521 aa3.85□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms