RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 KCNK7Q9Y2U2 307 aa16.46■□□□□ 0.23
SKA3-205ENST00000465471 VGLL3A8MV65 326 aa16.45■□□□□ 0.22
SKA3-205ENST00000465471 SNRPBP14678 240 aaKnown RBP16.45■□□□□ 0.22
SKA3-205ENST00000465471 NFYBP25208 207 aa16.45■□□□□ 0.22
SKA3-205ENST00000465471 RPS19P39019 145 aaKnown RBP16.45■□□□□ 0.22
SKA3-205ENST00000465471 NCS1P62166 190 aa16.45■□□□□ 0.22
SKA3-205ENST00000465471 DYNC1I2Q13409 638 aaKnown RBP16.45■□□□□ 0.22
SKA3-205ENST00000465471 HLA-DRB5Q30154 266 aa16.45■□□□□ 0.22
SKA3-205ENST00000465471 TMEM30BQ3MIR4 351 aa16.45■□□□□ 0.22
SKA3-205ENST00000465471 OR10R2Q8NGX6 335 aa16.45■□□□□ 0.22
SKA3-205ENST00000465471 OR9G1Q8NH87 305 aa16.45■□□□□ 0.22
SKA3-205ENST00000465471 ZNF596Q8TC21 504 aa16.45■□□□□ 0.22
SKA3-205ENST00000465471 MALSU1Q96EH3 234 aa16.45■□□□□ 0.22
SKA3-205ENST00000465471 RIMS4Q9H426 269 aaPredicted RBP16.45■□□□□ 0.22
SKA3-205ENST00000465471 METTL21EPA6NDL7 271 aa16.44■□□□□ 0.22
SKA3-205ENST00000465471 POM121CA8CG34 1229 aa16.44■□□□□ 0.22
SKA3-205ENST00000465471 MFNGO00587 321 aa16.44■□□□□ 0.22
SKA3-205ENST00000465471 HBZP02008 142 aa16.44■□□□□ 0.22
SKA3-205ENST00000465471 HMGN3Q15651 99 aa16.44■□□□□ 0.22
SKA3-205ENST00000465471 CTF1Q16619 201 aa16.44■□□□□ 0.22
SKA3-205ENST00000465471 CROCCP3Q8IVE0 287 aa16.44■□□□□ 0.22
SKA3-205ENST00000465471 UBALD1Q8TB05 177 aa16.44■□□□□ 0.22
SKA3-205ENST00000465471 RAB3CQ96E17 227 aa16.44■□□□□ 0.22
SKA3-205ENST00000465471 CHIAQ9BZP6 476 aa16.44■□□□□ 0.22
SKA3-205ENST00000465471 NAA50Q9GZZ1 169 aaKnown RBP16.44■□□□□ 0.22
SKA3-205ENST00000465471 DPAGT1Q9H3H5 408 aa16.44■□□□□ 0.22
SKA3-205ENST00000465471 TAF9BQ9HBM6 251 aa16.44■□□□□ 0.22
SKA3-205ENST00000465471 RAB9BQ9NP90 201 aa16.44■□□□□ 0.22
SKA3-205ENST00000465471 GFOD1Q9NXC2 390 aa16.44■□□□□ 0.22
SKA3-205ENST00000465471 PSG11Q9UQ72 335 aa16.44■□□□□ 0.22
SKA3-205ENST00000465471 ETV7Q9Y603 341 aa16.44■□□□□ 0.22
SKA3-205ENST00000465471 SPINT2O43291 252 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 PAX6P26367 422 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 HTR1DP28221 377 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 VBP1P61758 197 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 LTC4SQ16873 150 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 Q3ZCU0 254 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 IDNKQ5T6J7 187 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 OLFML2AQ68BL7 652 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 C16orf87Q6PH81 154 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 MOB1BQ7L9L4 216 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 C8orf31Q8N9H6 132 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 OR5R1Q8NH85 324 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 OR1L1Q8NH94 360 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 LEAP2Q969E1 77 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 SLC25A46Q96AG3 418 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 SLC25A38Q96DW6 304 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 HDHD3Q9BSH5 251 aaPredicted RBP16.43■□□□□ 0.22
SKA3-205ENST00000465471 MMP28Q9H239 520 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 C12orf4Q9NQ89 552 aa16.43■□□□□ 0.22
SKA3-205ENST00000465471 LY6LH3BQJ8 138 aa16.42■□□□□ 0.22
SKA3-205ENST00000465471 BUB1B-PAK6H3BSN5 160 aa16.42■□□□□ 0.22
SKA3-205ENST00000465471 J3QR06 171 aa16.42■□□□□ 0.22
SKA3-205ENST00000465471 SDCBPO00560 298 aaPredicted RBP16.42■□□□□ 0.22
SKA3-205ENST00000465471 HIST1H1DP16402 221 aaKnown RBP16.42■□□□□ 0.22
SKA3-205ENST00000465471 DYNLT3P51808 116 aa16.42■□□□□ 0.22
SKA3-205ENST00000465471 PRRX1P54821 245 aa16.42■□□□□ 0.22
SKA3-205ENST00000465471 LRRC75BQ2VPJ9 315 aa16.42■□□□□ 0.22
SKA3-205ENST00000465471 GPR141Q7Z602 305 aa16.42■□□□□ 0.22
SKA3-205ENST00000465471 LINC00311Q8N616 119 aa16.42■□□□□ 0.22
SKA3-205ENST00000465471 OR5H6Q8NGV6 325 aa16.42■□□□□ 0.22
SKA3-205ENST00000465471 PIFOQ8TCI5 191 aa16.42■□□□□ 0.22
SKA3-205ENST00000465471 ATG5Q9H1Y0 275 aa16.42■□□□□ 0.22
SKA3-205ENST00000465471 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.42■□□□□ 0.22
SKA3-205ENST00000465471 RHBDL2Q9NX52 303 aa16.42■□□□□ 0.22
SKA3-205ENST00000465471 KCNIP1Q9NZI2 227 aa16.42■□□□□ 0.22
SKA3-205ENST00000465471 DPM3Q9P2X0 92 aa16.42■□□□□ 0.22
SKA3-205ENST00000465471 VPREB3Q9UKI3 123 aa16.42■□□□□ 0.22
SKA3-205ENST00000465471 DNHD1Q96M86 4753 aa16.42■□□□□ 0.22
SKA3-205ENST00000465471 SERPINE3A8MV23 424 aa16.41■□□□□ 0.22
SKA3-205ENST00000465471 TOR1AO14656 332 aa16.41■□□□□ 0.22
SKA3-205ENST00000465471 SSX2Q16385 188 aa16.41■□□□□ 0.22
SKA3-205ENST00000465471 FAM53AQ6NSI3 398 aaPredicted RBP16.41■□□□□ 0.22
SKA3-205ENST00000465471 ZNF439Q8NDP4 499 aa16.41■□□□□ 0.22
SKA3-205ENST00000465471 NDNFQ8TB73 568 aa16.41■□□□□ 0.22
SKA3-205ENST00000465471 CREB3L1Q96BA8 519 aa16.41■□□□□ 0.22
SKA3-205ENST00000465471 SSX3Q99909 188 aa16.41■□□□□ 0.22
SKA3-205ENST00000465471 ABRACLQ9P1F3 81 aa16.41■□□□□ 0.22
SKA3-205ENST00000465471 SPATA2Q9UM82 520 aa16.41■□□□□ 0.22
SKA3-205ENST00000465471 H3BUX3 64 aa16.4■□□□□ 0.22
SKA3-205ENST00000465471 SCGNO76038 276 aa16.4■□□□□ 0.22
SKA3-205ENST00000465471 IGHV3-7P01780 117 aa16.4■□□□□ 0.22
SKA3-205ENST00000465471 GNB3P16520 340 aa16.4■□□□□ 0.22
SKA3-205ENST00000465471 SERPINB10P48595 397 aa16.4■□□□□ 0.22
SKA3-205ENST00000465471 RPL15P61313 204 aaKnown RBP16.4■□□□□ 0.22
SKA3-205ENST00000465471 HTD2P86397 168 aa16.4■□□□□ 0.22
SKA3-205ENST00000465471 GPR107Q5VW38 600 aa16.4■□□□□ 0.22
SKA3-205ENST00000465471 C5orf24Q7Z6I8 188 aa16.4■□□□□ 0.22
SKA3-205ENST00000465471 CMSS1Q9BQ75 279 aaKnown RBP16.4■□□□□ 0.22
SKA3-205ENST00000465471 CHMP1AQ9HD42 196 aaPredicted RBP16.4■□□□□ 0.22
SKA3-205ENST00000465471 Q9N2K0 584 aa16.4■□□□□ 0.22
SKA3-205ENST00000465471 TNFRSF19Q9NS68 423 aa16.4■□□□□ 0.22
SKA3-205ENST00000465471 IGHV3-43A0A0B4J1X8 118 aa16.39■□□□□ 0.21
SKA3-205ENST00000465471 TMEM89A2RUT3 159 aa16.39■□□□□ 0.21
SKA3-205ENST00000465471 BTBD17A6NE02 478 aa16.39■□□□□ 0.21
SKA3-205ENST00000465471 LEUTXA8MZ59 168 aa16.39■□□□□ 0.21
SKA3-205ENST00000465471 GPR137BO60478 399 aa16.39■□□□□ 0.21
SKA3-205ENST00000465471 IGHV3-43DP0DP04 118 aa16.39■□□□□ 0.21
SKA3-205ENST00000465471 RPL5P46777 297 aaKnown RBP16.39■□□□□ 0.21
SKA3-205ENST00000465471 GNG10P50151 68 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms