RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 MZT2AQ6P582 158 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 HEPN1Q6WQI6 88 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 ZNF497Q6ZNH5 498 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 C6orf201Q7Z4U5 140 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 ZNF565Q8N9K5 539 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 OR11H6Q8NGC7 330 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 MRGPRDQ8TDS7 321 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 SLC25A38Q96DW6 304 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 RAB3CQ96E17 227 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 SSX3Q99909 188 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 SULT4A1Q9BR01 284 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 FAAP24Q9BTP7 215 aa13.82□□□□□ -0.2
VPS52-215ENST00000464425 KBTBD11-OT1A0A1B0GTJ5 212 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 TMEM30CPA0ZSE6 113 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 BTBD17A6NE02 478 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 ZNF729A6NN14 1252 aaPredicted RBP13.81□□□□□ -0.2
VPS52-215ENST00000464425 POM121CA8CG34 1229 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 MT-ND4P03905 459 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 CRYBA1P05813 215 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 MOGAT2Q3SYC2 334 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 PLA1AQ53H76 456 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 AWAT1Q58HT5 328 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 PLAC9Q5JTB6 97 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 UBE2NLQ5JXB2 153 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 LDLRAD2Q5SZI1 272 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 ZNF626Q68DY1 528 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 DYNAPQ8N1N2 210 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 ABHD12Q8N2K0 398 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 SAMD12Q8N8I0 201 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 CCDC107Q8WV48 283 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 ARHGAP5-AS1Q96IT6 56 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 CLEC7AQ9BXN2 247 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 PECRQ9BY49 303 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 MEGF9Q9H1U4 602 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 ETAA1Q9NY74 926 aa13.81□□□□□ -0.2
VPS52-215ENST00000464425 UBE2QL1A1L167 161 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 GPR137BO60478 399 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 CGB3P0DN86 165 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 CGB7P0DN87 165 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 GZMHP20718 246 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 NFYBP25208 207 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 COMPP49747 757 aaPredicted RBP13.8□□□□□ -0.2
VPS52-215ENST00000464425 SSX2Q16385 188 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 LTC4SQ16873 150 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 UTF1Q5T230 341 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 OR52W1Q6IF63 320 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 RFESDQ8TAC1 157 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 DYRK2Q92630 601 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 PHF21AQ96BD5 680 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 S100A16Q96FQ6 103 aaKnown RBP13.8□□□□□ -0.2
VPS52-215ENST00000464425 CYYR1Q96J86 154 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 RIMS4Q9H426 269 aaPredicted RBP13.8□□□□□ -0.2
VPS52-215ENST00000464425 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.8□□□□□ -0.2
VPS52-215ENST00000464425 DIABLOQ9NR28 239 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 CALYQ9NYX4 217 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 COMMD3Q9UBI1 195 aa13.8□□□□□ -0.2
VPS52-215ENST00000464425 TBL2Q9Y4P3 447 aaKnown RBP13.8□□□□□ -0.2
VPS52-215ENST00000464425 A6NHS1 94 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 SERPINE3A8MV23 424 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 H3BUX3 64 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 APOA1P02647 267 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 FOXL1Q12952 345 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 LY6EQ16553 131 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 LRRC75BQ2VPJ9 315 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 C3orf56Q8N813 242 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 OR5R1Q8NH85 324 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 MALSU1Q96EH3 234 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 SLIRPQ9GZT3 109 aaKnown RBP13.79□□□□□ -0.2
VPS52-215ENST00000464425 LINC00574Q9H8X3 128 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 ZNF286AQ9HBT8 521 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 BATF3Q9NR55 127 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 C1RLQ9NZP8 487 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 VPREB3Q9UKI3 123 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 KCNK7Q9Y2U2 307 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 HILPDAQ9Y5L2 63 aa13.79□□□□□ -0.2
VPS52-215ENST00000464425 A0A075B6Q4 140 aa13.78□□□□□ -0.2
VPS52-215ENST00000464425 TRBV6-6A0A0A6YYG2 114 aa13.78□□□□□ -0.2
VPS52-215ENST00000464425 MFNGO00587 321 aa13.78□□□□□ -0.2
VPS52-215ENST00000464425 NAPSAO96009 420 aa13.78□□□□□ -0.2
VPS52-215ENST00000464425 IGHV3-7P01780 117 aa13.78□□□□□ -0.2
VPS52-215ENST00000464425 HIST1H1DP16402 221 aaKnown RBP13.78□□□□□ -0.2
VPS52-215ENST00000464425 SSTR5P35346 364 aa13.78□□□□□ -0.2
VPS52-215ENST00000464425 RAB13P51153 203 aa13.78□□□□□ -0.2
VPS52-215ENST00000464425 FOXB2Q5VYV0 432 aa13.78□□□□□ -0.2
VPS52-215ENST00000464425 RTN4RL2Q86UN3 420 aa13.78□□□□□ -0.2
VPS52-215ENST00000464425 KIRREL1Q96J84 757 aa13.78□□□□□ -0.2
VPS52-215ENST00000464425 NXF2Q9GZY0 626 aaKnown RBP13.78□□□□□ -0.2
VPS52-215ENST00000464425 IDI2-AS1Q9NZ38 188 aa13.78□□□□□ -0.2
VPS52-215ENST00000464425 AK3Q9UIJ7 227 aa13.78□□□□□ -0.2
VPS52-215ENST00000464425 TOR1AO14656 332 aa13.77□□□□□ -0.21
VPS52-215ENST00000464425 XRCC3O43542 346 aa13.77□□□□□ -0.21
VPS52-215ENST00000464425 ORC5O43913 435 aa13.77□□□□□ -0.21
VPS52-215ENST00000464425 GSTP1P09211 210 aaKnown RBP13.77□□□□□ -0.21
VPS52-215ENST00000464425 GNB3P16520 340 aa13.77□□□□□ -0.21
VPS52-215ENST00000464425 MDKP21741 143 aaPredicted RBP13.77□□□□□ -0.21
VPS52-215ENST00000464425 RELBQ01201 579 aa13.77□□□□□ -0.21
VPS52-215ENST00000464425 CDNFQ49AH0 187 aa13.77□□□□□ -0.21
VPS52-215ENST00000464425 MINOS1Q5TGZ0 78 aa13.77□□□□□ -0.21
VPS52-215ENST00000464425 TRAT1Q6PIZ9 186 aa13.77□□□□□ -0.21
VPS52-215ENST00000464425 ZNF554Q86TJ5 538 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms