RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 VHLP40337 213 aa17.65■□□□□ 0.42
USP4-208ENST00000464168 Q3ZCU0 254 aa17.65■□□□□ 0.42
USP4-208ENST00000464168 ATAD3CQ5T2N8 411 aa17.65■□□□□ 0.42
USP4-208ENST00000464168 XAF1Q6GPH4 301 aa17.65■□□□□ 0.42
USP4-208ENST00000464168 LINC00596Q86U02 117 aa17.65■□□□□ 0.42
USP4-208ENST00000464168 CBR4Q8N4T8 237 aa17.65■□□□□ 0.42
USP4-208ENST00000464168 ZNF439Q8NDP4 499 aa17.65■□□□□ 0.42
USP4-208ENST00000464168 TMEM106AQ96A25 262 aa17.65■□□□□ 0.42
USP4-208ENST00000464168 KCTD7Q96MP8 289 aa17.65■□□□□ 0.42
USP4-208ENST00000464168 Q96MT0 163 aa17.65■□□□□ 0.42
USP4-208ENST00000464168 TMEM138Q9NPI0 162 aa17.65■□□□□ 0.42
USP4-208ENST00000464168 MRPS18AQ9NVS2 196 aaKnown RBP17.65■□□□□ 0.42
USP4-208ENST00000464168 DYNC2H1Q8NCM8 4307 aaKnown RBP17.65■□□□□ 0.42
USP4-208ENST00000464168 C3orf84H3BNL1 204 aa17.64■□□□□ 0.41
USP4-208ENST00000464168 CIB2O75838 187 aa17.64■□□□□ 0.41
USP4-208ENST00000464168 LIMS3P0CW19 117 aa17.64■□□□□ 0.41
USP4-208ENST00000464168 LIMS4P0CW20 117 aa17.64■□□□□ 0.41
USP4-208ENST00000464168 SERPINA2P20848 420 aa17.64■□□□□ 0.41
USP4-208ENST00000464168 VDAC1P21796 283 aa17.64■□□□□ 0.41
USP4-208ENST00000464168 ZNF93P35789 620 aaPredicted RBP17.64■□□□□ 0.41
USP4-208ENST00000464168 ZNF134P52741 427 aa17.64■□□□□ 0.41
USP4-208ENST00000464168 ZNF137PP52743 207 aa17.64■□□□□ 0.41
USP4-208ENST00000464168 MPV17LQ2QL34 196 aa17.64■□□□□ 0.41
USP4-208ENST00000464168 ZNF260Q3ZCT1 412 aa17.64■□□□□ 0.41
USP4-208ENST00000464168 DDI2Q5TDH0 399 aa17.64■□□□□ 0.41
USP4-208ENST00000464168 SLC25A48Q6ZT89 311 aaKnown RBP17.64■□□□□ 0.41
USP4-208ENST00000464168 MYOZ3Q8TDC0 251 aa17.64■□□□□ 0.41
USP4-208ENST00000464168 ZNF580Q9UK33 172 aa17.64■□□□□ 0.41
USP4-208ENST00000464168 TENM2Q9NT68 2774 aa17.64■□□□□ 0.41
USP4-208ENST00000464168 SORL1Q92673 2214 aa17.63■□□□□ 0.41
USP4-208ENST00000464168 A0A1W2PP11 408 aa17.63■□□□□ 0.41
USP4-208ENST00000464168 C12orf77C9JDV5 145 aa17.63■□□□□ 0.41
USP4-208ENST00000464168 H3BNX3 289 aa17.63■□□□□ 0.41
USP4-208ENST00000464168 KIAA0141Q14154 515 aaPredicted RBP17.63■□□□□ 0.41
USP4-208ENST00000464168 CT45A1Q5HYN5 189 aa17.63■□□□□ 0.41
USP4-208ENST00000464168 OR11H1Q8NG94 326 aa17.63■□□□□ 0.41
USP4-208ENST00000464168 CT45A3Q8NHU0 189 aa17.63■□□□□ 0.41
USP4-208ENST00000464168 NEK7Q8TDX7 302 aa17.63■□□□□ 0.41
USP4-208ENST00000464168 PAK1IP1Q9NWT1 392 aaPredicted RBP17.63■□□□□ 0.41
USP4-208ENST00000464168 ZNF256Q9Y2P7 627 aaPredicted RBP17.63■□□□□ 0.41
USP4-208ENST00000464168 AIPO00170 330 aa17.62■□□□□ 0.41
USP4-208ENST00000464168 TXNL1O43396 289 aa17.62■□□□□ 0.41
USP4-208ENST00000464168 CHATP28329 748 aa17.62■□□□□ 0.41
USP4-208ENST00000464168 PPP3R1P63098 170 aa17.62■□□□□ 0.41
USP4-208ENST00000464168 CCDC58Q4VC31 144 aa17.62■□□□□ 0.41
USP4-208ENST00000464168 RPL22L1Q6P5R6 122 aaKnown RBP17.62■□□□□ 0.41
USP4-208ENST00000464168 ORAI1Q96D31 301 aa17.62■□□□□ 0.41
USP4-208ENST00000464168 S100A13Q99584 98 aa17.62■□□□□ 0.41
USP4-208ENST00000464168 KLK15Q9H2R5 256 aa17.62■□□□□ 0.41
USP4-208ENST00000464168 FAM53CQ9NYF3 392 aa17.62■□□□□ 0.41
USP4-208ENST00000464168 RPL36Q9Y3U8 105 aaKnown RBP17.62■□□□□ 0.41
USP4-208ENST00000464168 DNAH7Q8WXX0 4024 aa17.62■□□□□ 0.41
USP4-208ENST00000464168 ZNF780AO75290 641 aaPredicted RBP17.61■□□□□ 0.41
USP4-208ENST00000464168 GTF2F2P13984 249 aa17.61■□□□□ 0.41
USP4-208ENST00000464168 BDKRB2P30411 391 aa17.61■□□□□ 0.41
USP4-208ENST00000464168 SLC22A6Q4U2R8 563 aa17.61■□□□□ 0.41
USP4-208ENST00000464168 SYT6Q5T7P8 510 aaPredicted RBP17.61■□□□□ 0.41
USP4-208ENST00000464168 ASPHD1Q5U4P2 390 aa17.61■□□□□ 0.41
USP4-208ENST00000464168 STX19Q8N4C7 294 aa17.61■□□□□ 0.41
USP4-208ENST00000464168 OR10V1Q8NGI7 309 aa17.61■□□□□ 0.41
USP4-208ENST00000464168 GNG12Q9UBI6 72 aa17.61■□□□□ 0.41
USP4-208ENST00000464168 ZNF107Q9UII5 783 aaPredicted RBP17.61■□□□□ 0.41
USP4-208ENST00000464168 I3L521 148 aa17.6■□□□□ 0.41
USP4-208ENST00000464168 SPINT2O43291 252 aa17.6■□□□□ 0.41
USP4-208ENST00000464168 OR5H8P0DN80 308 aa17.6■□□□□ 0.41
USP4-208ENST00000464168 SLC2A2P11168 524 aaPredicted RBP17.6■□□□□ 0.41
USP4-208ENST00000464168 PPIFP30405 207 aaKnown RBP17.6■□□□□ 0.41
USP4-208ENST00000464168 OR1N2Q8NGR9 330 aa17.6■□□□□ 0.41
USP4-208ENST00000464168 UBE2E2Q96LR5 201 aa17.6■□□□□ 0.41
USP4-208ENST00000464168 GNB4Q9HAV0 340 aa17.6■□□□□ 0.41
USP4-208ENST00000464168 FGF20Q9NP95 211 aaPredicted RBP17.6■□□□□ 0.41
USP4-208ENST00000464168 RCC2Q9P258 522 aaKnown RBP17.6■□□□□ 0.41
USP4-208ENST00000464168 TRAPPC2LQ9UL33 140 aa17.6■□□□□ 0.41
USP4-208ENST00000464168 IGFBP3P17936 291 aaPredicted RBP17.59■□□□□ 0.41
USP4-208ENST00000464168 INSL3P51460 131 aa17.59■□□□□ 0.41
USP4-208ENST00000464168 RUNX1Q01196 453 aa17.59■□□□□ 0.41
USP4-208ENST00000464168 STEAP3Q658P3 488 aa17.59■□□□□ 0.41
USP4-208ENST00000464168 ZNF491Q8N8L2 437 aa17.59■□□□□ 0.41
USP4-208ENST00000464168 OR4K15Q8NH41 348 aa17.59■□□□□ 0.41
USP4-208ENST00000464168 OR1L1Q8NH94 360 aa17.59■□□□□ 0.41
USP4-208ENST00000464168 APH1BQ8WW43 257 aa17.59■□□□□ 0.41
USP4-208ENST00000464168 ZNF184Q99676 751 aaPredicted RBP17.59■□□□□ 0.41
USP4-208ENST00000464168 CHCHD6Q9BRQ6 235 aa17.59■□□□□ 0.41
USP4-208ENST00000464168 WSB1Q9Y6I7 421 aa17.59■□□□□ 0.41
USP4-208ENST00000464168 G3V318 75 aa17.58■□□□□ 0.4
USP4-208ENST00000464168 OGG1O15527 345 aa17.58■□□□□ 0.4
USP4-208ENST00000464168 LANCL1O43813 399 aa17.58■□□□□ 0.4
USP4-208ENST00000464168 HBZP02008 142 aa17.58■□□□□ 0.4
USP4-208ENST00000464168 OR8U8P0C7N1 319 aa17.58■□□□□ 0.4
USP4-208ENST00000464168 MYF6P23409 242 aa17.58■□□□□ 0.4
USP4-208ENST00000464168 ETV1P50549 477 aa17.58■□□□□ 0.4
USP4-208ENST00000464168 LSAMPQ13449 338 aa17.58■□□□□ 0.4
USP4-208ENST00000464168 RIPK1Q13546 671 aa17.58■□□□□ 0.4
USP4-208ENST00000464168 TMEM30BQ3MIR4 351 aa17.58■□□□□ 0.4
USP4-208ENST00000464168 OR2G6Q5TZ20 316 aa17.58■□□□□ 0.4
USP4-208ENST00000464168 GAPTQ8N292 157 aa17.58■□□□□ 0.4
USP4-208ENST00000464168 PRR18Q8N4B5 295 aa17.58■□□□□ 0.4
USP4-208ENST00000464168 OR13C5Q8NGS8 318 aa17.58■□□□□ 0.4
USP4-208ENST00000464168 RITA1Q96K30 269 aa17.58■□□□□ 0.4
USP4-208ENST00000464168 SLC29A1Q99808 456 aa17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms