RNA–Protein interactions for RNA: ENST00000463818.1

SF3A1-205, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-205ENST00000463818 SERPINE3A8MV23 424 aa14.92□□□□□ -0.02
SF3A1-205ENST00000463818 AIPO00170 330 aa14.92□□□□□ -0.02
SF3A1-205ENST00000463818 CELP19835 753 aa14.92□□□□□ -0.02
SF3A1-205ENST00000463818 HSPA13P48723 471 aa14.92□□□□□ -0.02
SF3A1-205ENST00000463818 SYT6Q5T7P8 510 aaPredicted RBP14.92□□□□□ -0.02
SF3A1-205ENST00000463818 CDH26Q8IXH8 852 aa14.92□□□□□ -0.02
SF3A1-205ENST00000463818 C8orf31Q8N9H6 132 aa14.92□□□□□ -0.02
SF3A1-205ENST00000463818 CHPT1Q8WUD6 406 aa14.92□□□□□ -0.02
SF3A1-205ENST00000463818 MRPS24Q96EL2 167 aaKnown RBP14.92□□□□□ -0.02
SF3A1-205ENST00000463818 BANF2Q9H503 90 aa14.92□□□□□ -0.02
SF3A1-205ENST00000463818 ETAA1Q9NY74 926 aa14.92□□□□□ -0.02
SF3A1-205ENST00000463818 RCC2Q9P258 522 aaKnown RBP14.92□□□□□ -0.02
SF3A1-205ENST00000463818 PSORS1C1Q9UIG5 152 aa14.92□□□□□ -0.02
SF3A1-205ENST00000463818 LINC00527Q9UJ94 153 aa14.92□□□□□ -0.02
SF3A1-205ENST00000463818 TRAPPC2LQ9UL33 140 aa14.92□□□□□ -0.02
SF3A1-205ENST00000463818 PEX16Q9Y5Y5 336 aa14.92□□□□□ -0.02
SF3A1-205ENST00000463818 MYF6P23409 242 aa14.91□□□□□ -0.02
SF3A1-205ENST00000463818 SLC35A2P78381 396 aa14.91□□□□□ -0.02
SF3A1-205ENST00000463818 AWAT2Q6E213 333 aa14.91□□□□□ -0.02
SF3A1-205ENST00000463818 RAB12Q6IQ22 244 aa14.91□□□□□ -0.02
SF3A1-205ENST00000463818 BPIFB6Q8NFQ5 453 aa14.91□□□□□ -0.02
SF3A1-205ENST00000463818 OR4K15Q8NH41 348 aa14.91□□□□□ -0.02
SF3A1-205ENST00000463818 EAF1Q96JC9 268 aaPredicted RBP14.91□□□□□ -0.02
SF3A1-205ENST00000463818 DERL3Q96Q80 235 aa14.91□□□□□ -0.02
SF3A1-205ENST00000463818 DNAH3Q8TD57 4116 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 LINC01548A6NM66 108 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 NCBP2LA6PVI3 153 aaKnown RBP14.9□□□□□ -0.02
SF3A1-205ENST00000463818 C12orf77C9JDV5 145 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 SPINT2O43291 252 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 IGHG2P01859 326 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 CD1AP06126 327 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 WNT4P56705 351 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 DOC2BQ14184 412 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 RNLSQ5VYX0 342 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 AHSA2Q719I0 299 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 SLC35E3Q7Z769 313 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 LYPD6Q86Y78 171 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 NANOGP1Q8N7R0 232 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 TMEM104Q8NE00 496 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 OR2T10Q8NGZ9 312 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 ST6GALNAC6Q969X2 333 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 RCC1LQ96I51 464 aaKnown RBP14.9□□□□□ -0.02
SF3A1-205ENST00000463818 SELENOIQ9C0D9 397 aa14.9□□□□□ -0.02
SF3A1-205ENST00000463818 MYL12BO14950 172 aa14.89□□□□□ -0.03
SF3A1-205ENST00000463818 SLC31A2O15432 143 aa14.89□□□□□ -0.03
SF3A1-205ENST00000463818 CRTAPO75718 401 aaPredicted RBP14.89□□□□□ -0.03
SF3A1-205ENST00000463818 MGMTP16455 207 aa14.89□□□□□ -0.03
SF3A1-205ENST00000463818 FUT3P21217 361 aa14.89□□□□□ -0.03
SF3A1-205ENST00000463818 IL3RAP26951 378 aa14.89□□□□□ -0.03
SF3A1-205ENST00000463818 VHLP40337 213 aa14.89□□□□□ -0.03
SF3A1-205ENST00000463818 ZNF134P52741 427 aa14.89□□□□□ -0.03
SF3A1-205ENST00000463818 RPL23AP62750 156 aaKnown RBP14.89□□□□□ -0.03
SF3A1-205ENST00000463818 Q3ZCU0 254 aa14.89□□□□□ -0.03
SF3A1-205ENST00000463818 C6orf183Q5T699 404 aa14.89□□□□□ -0.03
SF3A1-205ENST00000463818 IZUMO2Q6UXV1 221 aa14.89□□□□□ -0.03
SF3A1-205ENST00000463818 IZUMO1Q8IYV9 350 aa14.89□□□□□ -0.03
SF3A1-205ENST00000463818 OR1L1Q8NH94 360 aa14.89□□□□□ -0.03
SF3A1-205ENST00000463818 RTN4IP1Q8WWV3 396 aaPredicted RBP14.89□□□□□ -0.03
SF3A1-205ENST00000463818 RAB9BQ9NP90 201 aa14.89□□□□□ -0.03
SF3A1-205ENST00000463818 GNG12Q9UBI6 72 aa14.89□□□□□ -0.03
SF3A1-205ENST00000463818 UBE2QL1A1L167 161 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 FAM90A10PA6NDY2 464 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 FAM90A7PA6NKC0 464 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 FAM90A23PA8MXZ1 464 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 MPIG6BO95866 241 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 HBZP02008 142 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 CD1BP29016 333 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 CT45A1Q5HYN5 189 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 C6orf141Q5SZD1 244 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 SLC25A48Q6ZT89 311 aaKnown RBP14.88□□□□□ -0.03
SF3A1-205ENST00000463818 C18orf65Q6ZTR6 163 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 TGIF2LXQ8IUE1 241 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 GAPTQ8N292 157 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 PRR18Q8N4B5 295 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 Q8N6K4 173 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 LINC00482Q8N8I6 264 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 ZNF439Q8NDP4 499 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 OR10V1Q8NGI7 309 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 CT45A3Q8NHU0 189 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 ZFP57Q9NU63 452 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 ERGIC3Q9Y282 383 aa14.88□□□□□ -0.03
SF3A1-205ENST00000463818 RRP15Q9Y3B9 282 aaKnown RBP14.88□□□□□ -0.03
SF3A1-205ENST00000463818 ZNF736B4DX44 427 aaPredicted RBP14.87□□□□□ -0.03
SF3A1-205ENST00000463818 DUS4LO95620 317 aaKnown RBP14.87□□□□□ -0.03
SF3A1-205ENST00000463818 MOSP00540 346 aa14.87□□□□□ -0.03
SF3A1-205ENST00000463818 GLAP06280 429 aa14.87□□□□□ -0.03
SF3A1-205ENST00000463818 RCC1P18754 421 aaPredicted RBP14.87□□□□□ -0.03
SF3A1-205ENST00000463818 SLC35B1P78383 322 aa14.87□□□□□ -0.03
SF3A1-205ENST00000463818 SIGIRRQ6IA17 410 aa14.87□□□□□ -0.03
SF3A1-205ENST00000463818 OR2W3Q7Z3T1 314 aa14.87□□□□□ -0.03
SF3A1-205ENST00000463818 FOXRED2Q8IWF2 684 aa14.87□□□□□ -0.03
SF3A1-205ENST00000463818 MRPL41Q8IXM3 137 aaKnown RBP14.87□□□□□ -0.03
SF3A1-205ENST00000463818 STPG2Q8N412 459 aa14.87□□□□□ -0.03
SF3A1-205ENST00000463818 COMMD1Q8N668 190 aa14.87□□□□□ -0.03
SF3A1-205ENST00000463818 Q8N9W7 124 aa14.87□□□□□ -0.03
SF3A1-205ENST00000463818 OR51D1Q8NGF3 324 aa14.87□□□□□ -0.03
SF3A1-205ENST00000463818 CYYR1Q96J86 154 aa14.87□□□□□ -0.03
SF3A1-205ENST00000463818 Q96M66 194 aa14.87□□□□□ -0.03
SF3A1-205ENST00000463818 UQCC2Q9BRT2 126 aa14.87□□□□□ -0.03
SF3A1-205ENST00000463818 ABCG5Q9H222 651 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms