RNA–Protein interactions for RNA: ENST00000462604.1

COL8A1-204, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 190 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-204ENST00000462604 TGIF2LYQ8IUE0 185 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 BATF2Q8N1L9 274 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 PIP4P2Q8N4L2 257 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 ARL6IP6Q8N6S5 226 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 ZNF525Q8N782 197 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 AGBL5Q8NDL9 886 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 OR10A7Q8NGE5 316 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 OR10V1Q8NGI7 309 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 OR5A2Q8NGI9 324 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 OR2Y1Q8NGV0 311 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 OR51H1Q8NH63 302 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 OR10D3Q8NH80 312 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 IFI44Q8TCB0 444 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 FRZBQ92765 325 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 APOBEC3DQ96AK3 386 aaPredicted RBP3.01□□□□□ -1.93
COL8A1-204ENST00000462604 BTF3L4Q96K17 158 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 ADGRG7Q96K78 797 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 SNX22Q96L94 193 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 PACRGQ96M98 296 aaPredicted RBP3.01□□□□□ -1.93
COL8A1-204ENST00000462604 NOL4LQ96MY1 436 aaPredicted RBP3.01□□□□□ -1.93
COL8A1-204ENST00000462604 SMIM7Q9BQ49 75 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 TMEM147Q9BVK8 224 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 GPR87Q9BY21 358 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 GPR61Q9BZJ8 451 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 LINC00470Q9BZP3 86 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 MAP1LC3BQ9GZQ8 125 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 ZNF665Q9H7R5 613 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 SRD5A3Q9H8P0 318 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 PROK2Q9HC23 129 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 SDF2L1Q9HCN8 221 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 MANBALQ9NQG1 85 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 CCL28Q9NRJ3 127 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 SLC39A9Q9NUM3 307 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 OCIAD1Q9NX40 245 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 TAAR3PQ9P1P4 343 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 CACNG5Q9UF02 275 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 BOKQ9UMX3 212 aaPredicted RBP3.01□□□□□ -1.93
COL8A1-204ENST00000462604 OR2W1Q9Y3N9 320 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 RNF115Q9Y4L5 304 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 RBM7Q9Y580 266 aaKnown RBP3.01□□□□□ -1.93
COL8A1-204ENST00000462604 TIMM9Q9Y5J7 89 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 RFNGQ9Y644 331 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 CCDC88CQ9P219 2028 aa3.01□□□□□ -1.93
COL8A1-204ENST00000462604 IGKV3D-15A0A087WSY6 115 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 A0A087X0M5 115 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 IGKV1-6A0A0C4DH72 117 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 LY6G6EA0A0G2JKS1 128 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 A0A0G2JMM0 328 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 UBE2L5PA0A1B0GUS4 154 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 A0A1B0GX30 115 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 A0A1W2PPB8 328 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 A0A1W2PRS3 328 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 XKRY2A2RUG3 117 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 C5orf49A4QMS7 147 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 C19orf67A6NJJ6 358 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 LRRC3CA6NJW4 275 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 OR5B21A6NL26 309 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 KIR3DP1A8MWS1 328 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 B9A039 149 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 PPP5D1E7EU14 171 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 TMEM250H0YL14 139 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 MKRN2OSH3BPM6 223 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 J3QT63 122 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 SLC31A2O15432 143 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 LILRA1O75019 489 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 ZNF737O75373 536 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 TRAPPC6AO75865 159 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 KBTBD11O94819 623 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 LY86O95711 162 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 CLDN1O95832 211 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 HRASP01112 189 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 HLA-HP01893 362 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 PGA5P0DJD9 388 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 CCNOP22674 350 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 TUBG1P23258 451 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 GRNP28799 593 aaKnown RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 IL2RGP31785 369 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 CCKARP32238 428 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 APLNRP35414 380 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 ARR3P36575 388 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 GPX4P36969 197 aaPredicted RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 SRP14P37108 136 aaKnown RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 GALR1P47211 349 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 CXCL12P48061 93 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 DUSP3P51452 185 aaPredicted RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 LBX1P52954 281 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 FGF8P55075 233 aaPredicted RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 PAX9P55771 341 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 FAM3BP58499 235 aaPredicted RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 GNG3P63215 75 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 PMS2P11Q13670 270 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 GAMTQ14353 236 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 HERPUD1Q15011 391 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 MSMO1Q15800 293 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 ZNF726P1Q15940 193 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 SSX2Q16385 188 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 ATP6V1FQ16864 119 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 BSXQ3C1V8 233 aa3□□□□□ -1.93
COL8A1-204ENST00000462604 ACOT6Q3I5F7 207 aaPredicted RBP3□□□□□ -1.93
COL8A1-204ENST00000462604 Q3ZCU0 254 aa3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms