RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 C6orf183Q5T699 404 aa12.1□□□□□ -0.47
SKA3-204ENST00000462482 Q8N9W7 124 aa12.1□□□□□ -0.47
SKA3-204ENST00000462482 ZNF555Q8NEP9 628 aa12.1□□□□□ -0.47
SKA3-204ENST00000462482 UBALD1Q8TB05 177 aa12.1□□□□□ -0.47
SKA3-204ENST00000462482 RGP1Q92546 391 aaPredicted RBP12.1□□□□□ -0.47
SKA3-204ENST00000462482 S1PR3Q99500 378 aa12.1□□□□□ -0.47
SKA3-204ENST00000462482 CHCHD3Q9NX63 227 aaKnown RBP12.1□□□□□ -0.47
SKA3-204ENST00000462482 DSCAML1Q8TD84 2053 aa12.09□□□□□ -0.47
SKA3-204ENST00000462482 LINC01548A6NM66 108 aa12.09□□□□□ -0.47
SKA3-204ENST00000462482 H3BNX3 289 aa12.09□□□□□ -0.47
SKA3-204ENST00000462482 C15orf65H3BRN8 121 aa12.09□□□□□ -0.47
SKA3-204ENST00000462482 MT-ND4P03905 459 aa12.09□□□□□ -0.47
SKA3-204ENST00000462482 LIMS3P0CW19 117 aa12.09□□□□□ -0.47
SKA3-204ENST00000462482 LIMS4P0CW20 117 aa12.09□□□□□ -0.47
SKA3-204ENST00000462482 MYL12AP19105 171 aa12.09□□□□□ -0.47
SKA3-204ENST00000462482 TRAT1Q6PIZ9 186 aa12.09□□□□□ -0.47
SKA3-204ENST00000462482 Q8N6K4 173 aa12.09□□□□□ -0.47
SKA3-204ENST00000462482 ZNF184Q99676 751 aaPredicted RBP12.09□□□□□ -0.47
SKA3-204ENST00000462482 FGF20Q9NP95 211 aaPredicted RBP12.09□□□□□ -0.47
SKA3-204ENST00000462482 ETAA1Q9NY74 926 aa12.09□□□□□ -0.47
SKA3-204ENST00000462482 FAM53CQ9NYF3 392 aa12.09□□□□□ -0.47
SKA3-204ENST00000462482 DNAH3Q8TD57 4116 aa12.09□□□□□ -0.47
SKA3-204ENST00000462482 SEC14L6B5MCN3 397 aa12.08□□□□□ -0.48
SKA3-204ENST00000462482 ECI1P42126 302 aa12.08□□□□□ -0.48
SKA3-204ENST00000462482 LUMP51884 338 aaPredicted RBP12.08□□□□□ -0.48
SKA3-204ENST00000462482 DEFB136Q30KP8 78 aa12.08□□□□□ -0.48
SKA3-204ENST00000462482 TMEM65Q6PI78 240 aa12.08□□□□□ -0.48
SKA3-204ENST00000462482 ZNF497Q6ZNH5 498 aa12.08□□□□□ -0.48
SKA3-204ENST00000462482 PRR18Q8N4B5 295 aa12.08□□□□□ -0.48
SKA3-204ENST00000462482 SMIM19Q96E16 107 aa12.08□□□□□ -0.48
SKA3-204ENST00000462482 MRPS24Q96EL2 167 aaKnown RBP12.08□□□□□ -0.48
SKA3-204ENST00000462482 CHCHD6Q9BRQ6 235 aa12.08□□□□□ -0.48
SKA3-204ENST00000462482 BABAM2Q9NXR7 383 aa12.08□□□□□ -0.48
SKA3-204ENST00000462482 ZNF581Q9P0T4 197 aa12.08□□□□□ -0.48
SKA3-204ENST00000462482 U3KQK5 164 aa12.08□□□□□ -0.48
SKA3-204ENST00000462482 CA11O75493 328 aa12.07□□□□□ -0.48
SKA3-204ENST00000462482 IGHG4P01861 327 aa12.07□□□□□ -0.48
SKA3-204ENST00000462482 SYT6Q5T7P8 510 aaPredicted RBP12.07□□□□□ -0.48
SKA3-204ENST00000462482 SLC25A48Q6ZT89 311 aaKnown RBP12.07□□□□□ -0.48
SKA3-204ENST00000462482 JAGN1Q8N5M9 183 aa12.07□□□□□ -0.48
SKA3-204ENST00000462482 RNF152Q8N8N0 203 aa12.07□□□□□ -0.48
SKA3-204ENST00000462482 TMEM104Q8NE00 496 aa12.07□□□□□ -0.48
SKA3-204ENST00000462482 C4orf3Q8WVX3 66 aa12.07□□□□□ -0.48
SKA3-204ENST00000462482 ST6GALNAC6Q969X2 333 aa12.07□□□□□ -0.48
SKA3-204ENST00000462482 KCNIP1Q9NZI2 227 aa12.07□□□□□ -0.48
SKA3-204ENST00000462482 ZNF107Q9UII5 783 aaPredicted RBP12.07□□□□□ -0.48
SKA3-204ENST00000462482 MRPS28Q9Y2Q9 187 aaKnown RBP12.07□□□□□ -0.48
SKA3-204ENST00000462482 EXOSC1Q9Y3B2 195 aaKnown RBP12.07□□□□□ -0.48
SKA3-204ENST00000462482 NBEAL2Q6ZNJ1 2754 aa12.07□□□□□ -0.48
SKA3-204ENST00000462482 C12orf77C9JDV5 145 aa12.06□□□□□ -0.48
SKA3-204ENST00000462482 ETV1P50549 477 aa12.06□□□□□ -0.48
SKA3-204ENST00000462482 MMDQ15546 238 aa12.06□□□□□ -0.48
SKA3-204ENST00000462482 Q499Y3 187 aa12.06□□□□□ -0.48
SKA3-204ENST00000462482 OR2G6Q5TZ20 316 aa12.06□□□□□ -0.48
SKA3-204ENST00000462482 STEAP3Q658P3 488 aa12.06□□□□□ -0.48
SKA3-204ENST00000462482 XAF1Q6GPH4 301 aa12.06□□□□□ -0.48
SKA3-204ENST00000462482 RAB12Q6IQ22 244 aa12.06□□□□□ -0.48
SKA3-204ENST00000462482 OR10V1Q8NGI7 309 aa12.06□□□□□ -0.48
SKA3-204ENST00000462482 OR4K15Q8NH41 348 aa12.06□□□□□ -0.48
SKA3-204ENST00000462482 GHSRQ92847 366 aa12.06□□□□□ -0.48
SKA3-204ENST00000462482 KCTD7Q96MP8 289 aa12.06□□□□□ -0.48
SKA3-204ENST00000462482 PRR25Q96S07 402 aa12.06□□□□□ -0.48
SKA3-204ENST00000462482 PLSCR3Q9NRY6 295 aa12.06□□□□□ -0.48
SKA3-204ENST00000462482 PEX16Q9Y5Y5 336 aa12.06□□□□□ -0.48
SKA3-204ENST00000462482 ZNF736B4DX44 427 aaPredicted RBP12.05□□□□□ -0.48
SKA3-204ENST00000462482 OGG1O15527 345 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 LY86O95711 162 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 HBZP02008 142 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 IGF1P05019 195 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 INSL3P51460 131 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 ZNF137PP52743 207 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 ZNF260Q3ZCT1 412 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 YIF1BQ5BJH7 314 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 AWAT2Q6E213 333 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 GLIPR1L1Q6UWM5 242 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 FAM71E2Q8N5Q1 922 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 OR11H1Q8NG94 326 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 APH1BQ8WW43 257 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 MUL1Q969V5 352 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 SLC29A1Q99808 456 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 HSPB9Q9BQS6 159 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 OR2S2Q9NQN1 319 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 RCC2Q9P258 522 aaKnown RBP12.05□□□□□ -0.48
SKA3-204ENST00000462482 ZNF580Q9UK33 172 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 ERGIC3Q9Y282 383 aa12.05□□□□□ -0.48
SKA3-204ENST00000462482 A0A1W2PP11 408 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 SLC31A2O15432 143 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 LANCL1O43813 399 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 GPX5O75715 221 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 GLAP06280 429 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 OR8U8P0C7N1 319 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 SLC2A2P11168 524 aaPredicted RBP12.04□□□□□ -0.48
SKA3-204ENST00000462482 IGFBP3P17936 291 aaPredicted RBP12.04□□□□□ -0.48
SKA3-204ENST00000462482 MYF6P23409 242 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 F2RL1P55085 397 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 SMN1Q16637 294 aaKnown RBP12.04□□□□□ -0.48
SKA3-204ENST00000462482 CT45A1Q5HYN5 189 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 PQLC1Q8N2U9 271 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 ZNF439Q8NDP4 499 aa12.04□□□□□ -0.48
SKA3-204ENST00000462482 OR1L1Q8NH94 360 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms