RNA–Protein interactions for RNA: ENST00000461798.5

BRCA1-207, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 3

Gene BRCA1, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-207ENST00000461798 OR56B4Q8NH76 319 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 THRSPQ92748 146 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 DERL3Q96Q80 235 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 OR14A2Q96R54 314 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 RAB9BQ9NP90 201 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 NECAP2Q9NVZ3 263 aa7.26□□□□□ -1.25
BRCA1-207ENST00000461798 IGHV1-3A0A0C4DH29 117 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 A0A1W2PPK0 400 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 SDCBPO00560 298 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-207ENST00000461798 SC5DO75845 299 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 IGHG2P01859 326 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 CD37P11049 281 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 TMEM11P17152 192 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 CELP19835 753 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 ZNF137PP52743 207 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 DOC2BQ14184 412 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 LTC4SQ16873 150 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 RAB12Q6IQ22 244 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 C10orf99Q6UWK7 81 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 UNQ9370/PRO34162Q6UXP9 181 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 ZNF554Q86TJ5 538 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 IZUMO1Q8IYV9 350 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 STX19Q8N4C7 294 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 JAGN1Q8N5M9 183 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 Q8N6K4 173 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 ZNF439Q8NDP4 499 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 CHPT1Q8WUD6 406 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 TFAP2CQ92754 450 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 MUL1Q969V5 352 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 EAF1Q96JC9 268 aaPredicted RBP7.25□□□□□ -1.25
BRCA1-207ENST00000461798 UQCC2Q9BRT2 126 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 GHRLQ9UBU3 117 aa7.25□□□□□ -1.25
BRCA1-207ENST00000461798 MRPS28Q9Y2Q9 187 aaKnown RBP7.25□□□□□ -1.25
BRCA1-207ENST00000461798 A0A1W2PPE3 182 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 A0A1W2PRX2 142 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 PSMB11A5LHX3 300 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 C12orf77C9JDV5 145 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 AIPO00170 330 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 HSD17B6O14756 317 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 IGKV1D-33P01593 117 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 IGKV1-33P01594 117 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 PF4V1P10720 104 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 MGMTP16455 207 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 CD33P20138 364 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 FUT3P21217 361 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 MAPK3P27361 379 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-207ENST00000461798 CD1BP29016 333 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 SLC6A1P30531 599 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 VHLP40337 213 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 GNG10P50151 68 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 HES1Q14469 280 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 C9orf152Q5JTZ5 239 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 C6orf183Q5T699 404 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 SYT6Q5T7P8 510 aaPredicted RBP7.24□□□□□ -1.25
BRCA1-207ENST00000461798 SIGIRRQ6IA17 410 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 TRAT1Q6PIZ9 186 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 SLC25A48Q6ZT89 311 aaKnown RBP7.24□□□□□ -1.25
BRCA1-207ENST00000461798 AHSA2Q719I0 299 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 TGIF2LXQ8IUE1 241 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 MS4A15Q8N5U1 240 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 COMMD1Q8N668 190 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 NKAIN3Q8N8D7 197 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 TMEM104Q8NE00 496 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 BPIFB6Q8NFQ5 453 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 OR8H1Q8NGG4 311 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 OR2T10Q8NGZ9 312 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 NEK7Q8TDX7 302 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 CCDC107Q8WV48 283 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 PHF21AQ96BD5 680 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 Q96M66 194 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 PLSCR3Q9NRY6 295 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 ZFP57Q9NU63 452 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 MBNL3Q9NUK0 354 aaKnown RBP7.24□□□□□ -1.25
BRCA1-207ENST00000461798 ETAA1Q9NY74 926 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 ERGIC3Q9Y282 383 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 PEX16Q9Y5Y5 336 aa7.24□□□□□ -1.25
BRCA1-207ENST00000461798 H0YHG0 523 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 MYL12BO14950 172 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 SPINT2O43291 252 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 TXNL1O43396 289 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 DUS4LO95620 317 aaKnown RBP7.23□□□□□ -1.25
BRCA1-207ENST00000461798 HBZP02008 142 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 PRB2P02812 416 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-207ENST00000461798 MAS1P04201 325 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 CDK1P06493 297 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 UBBP0CG47 229 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 IGLL1P15814 213 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 IL3RAP26951 378 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 ZNF134P52741 427 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 GP2P55259 537 aaKnown RBP7.23□□□□□ -1.25
BRCA1-207ENST00000461798 GPR50Q13585 617 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 HNF4GQ14541 408 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 ACSM3Q53FZ2 586 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 CT45A1Q5HYN5 189 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 LY6G6FQ5SQ64 297 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 C1orf100Q5SVJ3 147 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 FOXB2Q5VYV0 432 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 AWAT2Q6E213 333 aa7.23□□□□□ -1.25
BRCA1-207ENST00000461798 FAM53AQ6NSI3 398 aaPredicted RBP7.23□□□□□ -1.25
BRCA1-207ENST00000461798 MOB3BQ86TA1 216 aa7.23□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms