RNA–Protein interactions for RNA: ENST00000460485.1

ERCC3-205, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 3

Gene ERCC3, Length 815 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-205ENST00000460485 RAB9BQ9NP90 201 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 KCNIP1Q9NZI2 227 aa11.94□□□□□ -0.5
ERCC3-205ENST00000460485 A0A1W2PR80 420 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 RHBDL1O75783 438 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 HAND1O96004 215 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 IGHV3-13P01766 116 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 SLC25A6P12236 298 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 MMP9P14780 707 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 UCP1P25874 307 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 LUMP51884 338 aaPredicted RBP11.93□□□□□ -0.5
ERCC3-205ENST00000460485 SELENOVP59797 346 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 S100A10P60903 97 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 RBPJQ06330 500 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 RAB32Q13637 225 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 ATXN7L3Q14CW9 347 aaPredicted RBP11.93□□□□□ -0.5
ERCC3-205ENST00000460485 HMGN3Q15651 99 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 GPR157Q5UAW9 335 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 BRICD5Q6PL45 260 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 ALKAL2Q6UX46 152 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 BAP18Q8IXM2 172 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 ZBTB34Q8NCN2 500 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 BVESQ8NE79 360 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 OR5D13Q8NGL4 314 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 PPP1R35Q8TAP8 253 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 GLYATL2Q8WU03 294 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 RDH5Q92781 318 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 TOLLIPQ9H0E2 274 aa11.93□□□□□ -0.5
ERCC3-205ENST00000460485 UBE2J1Q9Y385 318 aaPredicted RBP11.93□□□□□ -0.5
ERCC3-205ENST00000460485 KRBOX1C9JBD0 128 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 K7EPK0 472 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 CDIPTO14735 213 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 HS3ST1O14792 307 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 BET1O15155 118 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 ST8SIA3O43173 380 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 PHF1O43189 567 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-205ENST00000460485 MLNRO43193 412 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 PDGFAP04085 211 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 PVALBP20472 110 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-205ENST00000460485 GRNP28799 593 aaKnown RBP11.92□□□□□ -0.5
ERCC3-205ENST00000460485 GNRHRP30968 328 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 TDGF1P3P51864 188 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 ERVS71-1P61550 626 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 HERPUD1Q15011 391 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 TSC22D1Q15714 1073 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 PHLDA2Q53GA4 152 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 THOC7Q6I9Y2 204 aaKnown RBP11.92□□□□□ -0.5
ERCC3-205ENST00000460485 ACP7Q6ZNF0 438 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 CCDC28AQ8IWP9 274 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 TCTEX1D1Q8N7M0 179 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 SECTM1Q8WVN6 248 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 RBPMSQ93062 196 aaKnown RBP11.92□□□□□ -0.5
ERCC3-205ENST00000460485 FAM212BQ9NTI7 297 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-205ENST00000460485 LIN7CQ9NUP9 197 aaKnown RBP11.92□□□□□ -0.5
ERCC3-205ENST00000460485 GSKIPQ9P0R6 139 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 IL36RNQ9UBH0 155 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 ERRFI1Q9UJM3 462 aaPredicted RBP11.92□□□□□ -0.5
ERCC3-205ENST00000460485 APCP25054 2843 aa11.92□□□□□ -0.5
ERCC3-205ENST00000460485 OOEPA6NGQ2 149 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 H0YIZ8 118 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-205ENST00000460485 JTBO76095 146 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 SCTP09683 121 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 VDAC1P21796 283 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 P2RY1P47900 373 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 KLF3P57682 345 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-205ENST00000460485 NKX6-1P78426 367 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-205ENST00000460485 GNMTQ14749 295 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 PDCD1Q15116 288 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 AANATQ16613 207 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 TOR2AQ5JU69 321 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 ZNF474Q6S9Z5 364 aaPredicted RBP11.91□□□□□ -0.5
ERCC3-205ENST00000460485 WDR82Q6UXN9 313 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 TBC1D26Q86UD7 250 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 ZNF695Q8IW36 515 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 OR10V1Q8NGI7 309 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 OR1S1Q8NH92 325 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 ERGIC1Q969X5 290 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 MRPL24Q96A35 216 aaKnown RBP11.91□□□□□ -0.5
ERCC3-205ENST00000460485 S100PBPQ96BU1 408 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 ZNF488Q96MN9 340 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 NCOR1P1Q9H4R4 102 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 SDHAF2Q9NX18 166 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 TINAGQ9UJW2 476 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 TRAPPC2LQ9UL33 140 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 POMT1Q9Y6A1 747 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 ADGRG4Q8IZF6 3080 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 SVILO95425 2214 aa11.91□□□□□ -0.5
ERCC3-205ENST00000460485 IGLV3-9A0A075B6K5 115 aa11.9□□□□□ -0.5
ERCC3-205ENST00000460485 MFSD2BA6NFX1 497 aa11.9□□□□□ -0.5
ERCC3-205ENST00000460485 A6NLC8 198 aa11.9□□□□□ -0.5
ERCC3-205ENST00000460485 SIRPB1O00241 398 aa11.9□□□□□ -0.5
ERCC3-205ENST00000460485 SHOXO15266 292 aa11.9□□□□□ -0.5
ERCC3-205ENST00000460485 GRPP07492 148 aa11.9□□□□□ -0.5
ERCC3-205ENST00000460485 GLI4P10075 376 aa11.9□□□□□ -0.5
ERCC3-205ENST00000460485 ZP3P21754 424 aa11.9□□□□□ -0.5
ERCC3-205ENST00000460485 RPL12P30050 165 aaKnown RBP11.9□□□□□ -0.5
ERCC3-205ENST00000460485 P2RX3P56373 397 aa11.9□□□□□ -0.5
ERCC3-205ENST00000460485 UQCC3Q6UW78 93 aa11.9□□□□□ -0.5
ERCC3-205ENST00000460485 NUP37Q8NFH4 326 aa11.9□□□□□ -0.5
ERCC3-205ENST00000460485 RNF141Q8WVD5 230 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms