RNA–Protein interactions for RNA: ENST00000460289.5

PTPN4-208, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 4

Gene PTPN4, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-208ENST00000460289 OR6M1Q8NGM8 313 aa18.41■□□□□ 0.54
PTPN4-208ENST00000460289 OR4K15Q8NH41 348 aa18.41■□□□□ 0.54
PTPN4-208ENST00000460289 CFHR4Q92496 578 aa18.41■□□□□ 0.54
PTPN4-208ENST00000460289 RBM14Q96PK6 669 aaKnown RBP18.41■□□□□ 0.54
PTPN4-208ENST00000460289 SLC25A33Q9BSK2 321 aa18.41■□□□□ 0.54
PTPN4-208ENST00000460289 ACOT13Q9NPJ3 140 aa18.41■□□□□ 0.54
PTPN4-208ENST00000460289 UBE2QL1A1L167 161 aa18.4■□□□□ 0.54
PTPN4-208ENST00000460289 SLC22A1O15245 554 aa18.4■□□□□ 0.54
PTPN4-208ENST00000460289 LOXL3P58215 753 aa18.4■□□□□ 0.54
PTPN4-208ENST00000460289 RPS27AP62979 156 aaKnown RBP18.4■□□□□ 0.54
PTPN4-208ENST00000460289 Q3ZCU0 254 aa18.4■□□□□ 0.54
PTPN4-208ENST00000460289 OR8H3Q8N146 312 aa18.4■□□□□ 0.54
PTPN4-208ENST00000460289 LINC00311Q8N616 119 aa18.4■□□□□ 0.54
PTPN4-208ENST00000460289 NEDD4LQ96PU5 975 aa18.4■□□□□ 0.54
PTPN4-208ENST00000460289 TMEM59Q9BXS4 323 aa18.4■□□□□ 0.54
PTPN4-208ENST00000460289 GFOD1Q9NXC2 390 aa18.4■□□□□ 0.54
PTPN4-208ENST00000460289 A0A1W2PPE3 182 aa18.39■□□□□ 0.53
PTPN4-208ENST00000460289 FAM90A9PA6NNJ1 464 aa18.39■□□□□ 0.53
PTPN4-208ENST00000460289 C12orf77C9JDV5 145 aa18.39■□□□□ 0.53
PTPN4-208ENST00000460289 M0QZK8 103 aa18.39■□□□□ 0.53
PTPN4-208ENST00000460289 BPNT1O95861 308 aa18.39■□□□□ 0.53
PTPN4-208ENST00000460289 RANBP1P43487 201 aa18.39■□□□□ 0.53
PTPN4-208ENST00000460289 VDAC2P45880 294 aaPredicted RBP18.39■□□□□ 0.53
PTPN4-208ENST00000460289 ZNF367Q7RTV3 350 aa18.39■□□□□ 0.53
PTPN4-208ENST00000460289 OCSTAMPQ9BR26 566 aa18.39■□□□□ 0.53
PTPN4-208ENST00000460289 Q9H521 79 aa18.39■□□□□ 0.53
PTPN4-208ENST00000460289 KCNIP1Q9NZI2 227 aa18.39■□□□□ 0.53
PTPN4-208ENST00000460289 MRPS14O60783 128 aaKnown RBP18.38■□□□□ 0.53
PTPN4-208ENST00000460289 CSF1P09603 554 aa18.38■□□□□ 0.53
PTPN4-208ENST00000460289 NKAPLQ5M9Q1 402 aa18.38■□□□□ 0.53
PTPN4-208ENST00000460289 OR10K2Q6IF99 312 aa18.38■□□□□ 0.53
PTPN4-208ENST00000460289 Q6ZS46 218 aa18.38■□□□□ 0.53
PTPN4-208ENST00000460289 ZNF554Q86TJ5 538 aa18.38■□□□□ 0.53
PTPN4-208ENST00000460289 C11orf44Q8N8P7 122 aa18.38■□□□□ 0.53
PTPN4-208ENST00000460289 UBALD1Q8TB05 177 aa18.38■□□□□ 0.53
PTPN4-208ENST00000460289 WNT10AQ9GZT5 417 aa18.38■□□□□ 0.53
PTPN4-208ENST00000460289 PLGRKTQ9HBL7 147 aa18.38■□□□□ 0.53
PTPN4-208ENST00000460289 IGHV3-43A0A0B4J1X8 118 aa18.37■□□□□ 0.53
PTPN4-208ENST00000460289 A0A1W2PPI3 338 aa18.37■□□□□ 0.53
PTPN4-208ENST00000460289 GAPDHP04406 335 aaKnown RBP18.37■□□□□ 0.53
PTPN4-208ENST00000460289 IGHV3-43DP0DP04 118 aa18.37■□□□□ 0.53
PTPN4-208ENST00000460289 RCC1P18754 421 aaPredicted RBP18.37■□□□□ 0.53
PTPN4-208ENST00000460289 IL3RAP26951 378 aa18.37■□□□□ 0.53
PTPN4-208ENST00000460289 CALRP27797 417 aaKnown RBP18.37■□□□□ 0.53
PTPN4-208ENST00000460289 PSMD7P51665 324 aa18.37■□□□□ 0.53
PTPN4-208ENST00000460289 GABARAPL2P60520 117 aa18.37■□□□□ 0.53
PTPN4-208ENST00000460289 FABP5Q01469 135 aa18.37■□□□□ 0.53
PTPN4-208ENST00000460289 ZNF816Q0VGE8 651 aaPredicted RBP18.37■□□□□ 0.53
PTPN4-208ENST00000460289 PRR18Q8N4B5 295 aa18.37■□□□□ 0.53
PTPN4-208ENST00000460289 DRAM1Q8N682 238 aa18.37■□□□□ 0.53
PTPN4-208ENST00000460289 OR56B4Q8NH76 319 aa18.37■□□□□ 0.53
PTPN4-208ENST00000460289 TM2D1Q9BX74 207 aa18.37■□□□□ 0.53
PTPN4-208ENST00000460289 MBNL3Q9NUK0 354 aaKnown RBP18.37■□□□□ 0.53
PTPN4-208ENST00000460289 GNG12Q9UBI6 72 aa18.37■□□□□ 0.53
PTPN4-208ENST00000460289 AK6Q9Y3D8 172 aaKnown RBP18.37■□□□□ 0.53
PTPN4-208ENST00000460289 TMEM14DPA8MWL7 114 aa18.36■□□□□ 0.53
PTPN4-208ENST00000460289 CCRL2O00421 344 aa18.36■□□□□ 0.53
PTPN4-208ENST00000460289 SLC17A2O00624 439 aa18.36■□□□□ 0.53
PTPN4-208ENST00000460289 HSD17B6O14756 317 aa18.36■□□□□ 0.53
PTPN4-208ENST00000460289 HBZP02008 142 aa18.36■□□□□ 0.53
PTPN4-208ENST00000460289 SNRNP70P08621 437 aaKnown RBP18.36■□□□□ 0.53
PTPN4-208ENST00000460289 ARSBP15848 533 aa18.36■□□□□ 0.53
PTPN4-208ENST00000460289 CHATP28329 748 aa18.36■□□□□ 0.53
PTPN4-208ENST00000460289 UNC119Q13432 240 aa18.36■□□□□ 0.53
PTPN4-208ENST00000460289 DIAPH2-AS1Q14236 149 aa18.36■□□□□ 0.53
PTPN4-208ENST00000460289 OR2W3Q7Z3T1 314 aa18.36■□□□□ 0.53
PTPN4-208ENST00000460289 URM1Q9BTM9 101 aaKnown RBP18.36■□□□□ 0.53
PTPN4-208ENST00000460289 TAF9BQ9HBM6 251 aa18.36■□□□□ 0.53
PTPN4-208ENST00000460289 LRRC42Q9Y546 428 aa18.36■□□□□ 0.53
PTPN4-208ENST00000460289 DENRO43583 198 aaKnown RBP18.35■□□□□ 0.53
PTPN4-208ENST00000460289 FBXO24O75426 580 aa18.35■□□□□ 0.53
PTPN4-208ENST00000460289 QRFPP83859 136 aa18.35■□□□□ 0.53
PTPN4-208ENST00000460289 EMX1Q04741 257 aaPredicted RBP18.35■□□□□ 0.53
PTPN4-208ENST00000460289 HES1Q14469 280 aa18.35■□□□□ 0.53
PTPN4-208ENST00000460289 ABCA11PQ4W5N1 156 aa18.35■□□□□ 0.53
PTPN4-208ENST00000460289 STEAP3Q658P3 488 aa18.35■□□□□ 0.53
PTPN4-208ENST00000460289 OR1L1Q8NH94 360 aa18.35■□□□□ 0.53
PTPN4-208ENST00000460289 FAM110DQ8TAY7 271 aaPredicted RBP18.35■□□□□ 0.53
PTPN4-208ENST00000460289 MRPL30Q8TCC3 161 aaKnown RBP18.35■□□□□ 0.53
PTPN4-208ENST00000460289 SULT4A1Q9BR01 284 aa18.35■□□□□ 0.53
PTPN4-208ENST00000460289 WNK1Q9H4A3 2382 aa18.35■□□□□ 0.53
PTPN4-208ENST00000460289 TET2Q6N021 2002 aaPredicted RBP18.35■□□□□ 0.53
PTPN4-208ENST00000460289 VWFP04275 2813 aa18.34■□□□□ 0.53
PTPN4-208ENST00000460289 TSPAN15O95858 294 aa18.34■□□□□ 0.53
PTPN4-208ENST00000460289 LPLP06858 475 aa18.34■□□□□ 0.53
PTPN4-208ENST00000460289 BLVRBP30043 206 aaPredicted RBP18.34■□□□□ 0.53
PTPN4-208ENST00000460289 RAB11BQ15907 218 aa18.34■□□□□ 0.53
PTPN4-208ENST00000460289 MOB3BQ86TA1 216 aa18.34■□□□□ 0.53
PTPN4-208ENST00000460289 SVOPQ8N4V2 548 aa18.34■□□□□ 0.53
PTPN4-208ENST00000460289 WIPF2Q8TF74 440 aaPredicted RBP18.34■□□□□ 0.53
PTPN4-208ENST00000460289 GFI1Q99684 422 aa18.34■□□□□ 0.53
PTPN4-208ENST00000460289 FAAP24Q9BTP7 215 aa18.34■□□□□ 0.53
PTPN4-208ENST00000460289 YTHDF1Q9BYJ9 559 aaKnown RBP18.34■□□□□ 0.53
PTPN4-208ENST00000460289 OR2S2Q9NQN1 319 aa18.34■□□□□ 0.53
PTPN4-208ENST00000460289 PLEKHJ1Q9NW61 149 aa18.34■□□□□ 0.53
PTPN4-208ENST00000460289 MOB4Q9Y3A3 225 aa18.34■□□□□ 0.53
PTPN4-208ENST00000460289 IGHV1-3A0A0C4DH29 117 aa18.33■□□□□ 0.52
PTPN4-208ENST00000460289 AMY1AP04745 511 aa18.33■□□□□ 0.52
PTPN4-208ENST00000460289 AMY2AP04746 511 aa18.33■□□□□ 0.52
PTPN4-208ENST00000460289 TMEM11P17152 192 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms