RNA–Protein interactions for RNA: ENST00000460048.1

SHANK2-213, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 736 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-213ENST00000460048 CPEP16870 476 aa13.15□□□□□ -0.3
SHANK2-213ENST00000460048 VDAC2P45880 294 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-213ENST00000460048 RAB7AP51149 207 aa13.15□□□□□ -0.3
SHANK2-213ENST00000460048 MLLT11Q13015 90 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-213ENST00000460048 Q3ZCU0 254 aa13.15□□□□□ -0.3
SHANK2-213ENST00000460048 FAM53AQ6NSI3 398 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-213ENST00000460048 TMEM91Q6ZNR0 172 aa13.15□□□□□ -0.3
SHANK2-213ENST00000460048 OR8H3Q8N146 312 aa13.15□□□□□ -0.3
SHANK2-213ENST00000460048 OR4K15Q8NH41 348 aa13.15□□□□□ -0.3
SHANK2-213ENST00000460048 FAM110DQ8TAY7 271 aaPredicted RBP13.15□□□□□ -0.3
SHANK2-213ENST00000460048 CAPSLQ8WWF8 208 aa13.15□□□□□ -0.3
SHANK2-213ENST00000460048 FAM46BQ96A09 425 aa13.15□□□□□ -0.3
SHANK2-213ENST00000460048 CST11Q9H112 138 aa13.15□□□□□ -0.3
SHANK2-213ENST00000460048 TRAPPC2LQ9UL33 140 aa13.15□□□□□ -0.3
SHANK2-213ENST00000460048 SLC22A1O15245 554 aa13.14□□□□□ -0.31
SHANK2-213ENST00000460048 PDCD6O75340 191 aa13.14□□□□□ -0.31
SHANK2-213ENST00000460048 MPIG6BO95866 241 aa13.14□□□□□ -0.31
SHANK2-213ENST00000460048 SNRNP70P08621 437 aaKnown RBP13.14□□□□□ -0.31
SHANK2-213ENST00000460048 FAM106CPP0CH98 169 aa13.14□□□□□ -0.31
SHANK2-213ENST00000460048 HSMCR30P0CW71 290 aa13.14□□□□□ -0.31
SHANK2-213ENST00000460048 RPS25P62851 125 aaKnown RBP13.14□□□□□ -0.31
SHANK2-213ENST00000460048 ZNF816Q0VGE8 651 aaPredicted RBP13.14□□□□□ -0.31
SHANK2-213ENST00000460048 TRAM1Q15629 374 aa13.14□□□□□ -0.31
SHANK2-213ENST00000460048 ABCA11PQ4W5N1 156 aa13.14□□□□□ -0.31
SHANK2-213ENST00000460048 ARSJQ5FYB0 599 aaPredicted RBP13.14□□□□□ -0.31
SHANK2-213ENST00000460048 DRAM1Q8N682 238 aa13.14□□□□□ -0.31
SHANK2-213ENST00000460048 OR10X1Q8NGY0 326 aa13.14□□□□□ -0.31
SHANK2-213ENST00000460048 OR56B4Q8NH76 319 aa13.14□□□□□ -0.31
SHANK2-213ENST00000460048 TMEM203Q969S6 136 aa13.14□□□□□ -0.31
SHANK2-213ENST00000460048 CNBD2Q96M20 576 aa13.14□□□□□ -0.31
SHANK2-213ENST00000460048 CCDC90BQ9GZT6 254 aa13.14□□□□□ -0.31
SHANK2-213ENST00000460048 MBNL3Q9NUK0 354 aaKnown RBP13.14□□□□□ -0.31
SHANK2-213ENST00000460048 IGHV3-43A0A0B4J1X8 118 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 UBE2QL1A1L167 161 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 M0QZK8 103 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 HSD17B6O14756 317 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 IGHV3-43DP0DP04 118 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 RCC1P18754 421 aaPredicted RBP13.13□□□□□ -0.31
SHANK2-213ENST00000460048 CHATP28329 748 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 HTR2CP28335 458 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 MAP2K4P45985 399 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 RPS27AP62979 156 aaKnown RBP13.13□□□□□ -0.31
SHANK2-213ENST00000460048 QRFPP83859 136 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 DEFA6Q01524 100 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 UNC119Q13432 240 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 TMEM30BQ3MIR4 351 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 C6orf183Q5T699 404 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 OR10K2Q6IF99 312 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 TRAT1Q6PIZ9 186 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 ZNF439Q8NDP4 499 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 ST6GALNAC6Q969X2 333 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 GFI1Q99684 422 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 MGLLQ99685 303 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 TM2D1Q9BX74 207 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 RAB9BQ9NP90 201 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 RAB26Q9ULW5 256 aa13.13□□□□□ -0.31
SHANK2-213ENST00000460048 ADARB2-AS1A8MUL3 147 aa13.12□□□□□ -0.31
SHANK2-213ENST00000460048 TMEM14DPA8MWL7 114 aa13.12□□□□□ -0.31
SHANK2-213ENST00000460048 SPINT2O43291 252 aa13.12□□□□□ -0.31
SHANK2-213ENST00000460048 PEX14O75381 377 aa13.12□□□□□ -0.31
SHANK2-213ENST00000460048 ATP6V1G2O95670 118 aa13.12□□□□□ -0.31
SHANK2-213ENST00000460048 HBZP02008 142 aa13.12□□□□□ -0.31
SHANK2-213ENST00000460048 GAPDHP04406 335 aaKnown RBP13.12□□□□□ -0.31
SHANK2-213ENST00000460048 LPLP06858 475 aa13.12□□□□□ -0.31
SHANK2-213ENST00000460048 PSMA1P25786 263 aaKnown RBP13.12□□□□□ -0.31
SHANK2-213ENST00000460048 EBI3Q14213 229 aa13.12□□□□□ -0.31
SHANK2-213ENST00000460048 TBCEQ15813 527 aaPredicted RBP13.12□□□□□ -0.31
SHANK2-213ENST00000460048 SLC25A48Q6ZT89 311 aaKnown RBP13.12□□□□□ -0.31
SHANK2-213ENST00000460048 NDUFA11Q86Y39 141 aa13.12□□□□□ -0.31
SHANK2-213ENST00000460048 LYG1Q8N1E2 194 aa13.12□□□□□ -0.31
SHANK2-213ENST00000460048 OR6M1Q8NGM8 313 aa13.12□□□□□ -0.31
SHANK2-213ENST00000460048 OR1L1Q8NH94 360 aa13.12□□□□□ -0.31
SHANK2-213ENST00000460048 KCNG3Q8TAE7 436 aa13.12□□□□□ -0.31
SHANK2-213ENST00000460048 MRPL30Q8TCC3 161 aaKnown RBP13.12□□□□□ -0.31
SHANK2-213ENST00000460048 CITED2Q99967 270 aaPredicted RBP13.12□□□□□ -0.31
SHANK2-213ENST00000460048 TMEM59Q9BXS4 323 aa13.12□□□□□ -0.31
SHANK2-213ENST00000460048 KCNK15Q9H427 330 aa13.12□□□□□ -0.31
SHANK2-213ENST00000460048 MOB4Q9Y3A3 225 aa13.12□□□□□ -0.31
SHANK2-213ENST00000460048 IGHV1-3A0A0C4DH29 117 aa13.11□□□□□ -0.31
SHANK2-213ENST00000460048 SH2D7A6NKC9 451 aaPredicted RBP13.11□□□□□ -0.31
SHANK2-213ENST00000460048 CCRL2O00421 344 aa13.11□□□□□ -0.31
SHANK2-213ENST00000460048 SLC31A2O15432 143 aa13.11□□□□□ -0.31
SHANK2-213ENST00000460048 BPNT1O95861 308 aa13.11□□□□□ -0.31
SHANK2-213ENST00000460048 OPN1MWP04001 364 aa13.11□□□□□ -0.31
SHANK2-213ENST00000460048 OPN1MW2P0DN77 364 aa13.11□□□□□ -0.31
SHANK2-213ENST00000460048 OPN1MW3P0DN78 364 aa13.11□□□□□ -0.31
SHANK2-213ENST00000460048 ZNF134P52741 427 aa13.11□□□□□ -0.31
SHANK2-213ENST00000460048 ZNF137PP52743 207 aa13.11□□□□□ -0.31
SHANK2-213ENST00000460048 FABP5Q01469 135 aa13.11□□□□□ -0.31
SHANK2-213ENST00000460048 ZNF554Q86TJ5 538 aa13.11□□□□□ -0.31
SHANK2-213ENST00000460048 OR5AU1Q8NGC0 362 aa13.11□□□□□ -0.31
SHANK2-213ENST00000460048 SULT4A1Q9BR01 284 aa13.11□□□□□ -0.31
SHANK2-213ENST00000460048 NICN1Q9BSH3 213 aa13.11□□□□□ -0.31
SHANK2-213ENST00000460048 TAF9BQ9HBM6 251 aa13.11□□□□□ -0.31
SHANK2-213ENST00000460048 SLC17A2O00624 439 aa13.1□□□□□ -0.31
SHANK2-213ENST00000460048 FGF16O43320 207 aa13.1□□□□□ -0.31
SHANK2-213ENST00000460048 ARL6IP5O75915 188 aa13.1□□□□□ -0.31
SHANK2-213ENST00000460048 IGKV1D-33P01593 117 aa13.1□□□□□ -0.31
SHANK2-213ENST00000460048 IGKV1-33P01594 117 aa13.1□□□□□ -0.31
SHANK2-213ENST00000460048 TMEM11P17152 192 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms