RNA–Protein interactions for RNA: ENST00000459997.1

SRM-202, Transcript of spermidine synthase, humanhuman

TSL 5

Gene SRM, Length 731 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-202ENST00000459997 HNF4GQ14541 408 aa16.61■□□□□ 0.25
SRM-202ENST00000459997 TCTEX1D4Q5JR98 221 aa16.61■□□□□ 0.25
SRM-202ENST00000459997 KPRPQ5T749 579 aaPredicted RBP16.61■□□□□ 0.25
SRM-202ENST00000459997 FAM27D1Q5T7N8 215 aa16.61■□□□□ 0.25
SRM-202ENST00000459997 RAB12Q6IQ22 244 aa16.61■□□□□ 0.25
SRM-202ENST00000459997 PRSS48Q7RTY5 328 aa16.61■□□□□ 0.25
SRM-202ENST00000459997 NKAIN3Q8N8D7 197 aa16.61■□□□□ 0.25
SRM-202ENST00000459997 OR4X2Q8NGF9 303 aa16.61■□□□□ 0.25
SRM-202ENST00000459997 OR52M1Q8NGK5 317 aa16.61■□□□□ 0.25
SRM-202ENST00000459997 SELENOIQ9C0D9 397 aa16.61■□□□□ 0.25
SRM-202ENST00000459997 ETAA1Q9NY74 926 aa16.61■□□□□ 0.25
SRM-202ENST00000459997 PRKDCP78527 4128 aaKnown RBP16.6■□□□□ 0.25
SRM-202ENST00000459997 IGHV3-43A0A0B4J1X8 118 aa16.6■□□□□ 0.25
SRM-202ENST00000459997 TCRBV4S1A1TA0A5B7 111 aa16.6■□□□□ 0.25
SRM-202ENST00000459997 CRTAPO75718 401 aaPredicted RBP16.6■□□□□ 0.25
SRM-202ENST00000459997 IGKV1D-33P01593 117 aa16.6■□□□□ 0.25
SRM-202ENST00000459997 IGKV1-33P01594 117 aa16.6■□□□□ 0.25
SRM-202ENST00000459997 HSMCR30P0CW71 290 aa16.6■□□□□ 0.25
SRM-202ENST00000459997 IGHV3-43DP0DP04 118 aa16.6■□□□□ 0.25
SRM-202ENST00000459997 MGMTP16455 207 aa16.6■□□□□ 0.25
SRM-202ENST00000459997 GP2P55259 537 aaKnown RBP16.6■□□□□ 0.25
SRM-202ENST00000459997 ACSM3Q53FZ2 586 aa16.6■□□□□ 0.25
SRM-202ENST00000459997 LIPKQ5VXJ0 399 aa16.6■□□□□ 0.25
SRM-202ENST00000459997 C10orf99Q6UWK7 81 aa16.6■□□□□ 0.25
SRM-202ENST00000459997 UNQ9370/PRO34162Q6UXP9 181 aa16.6■□□□□ 0.25
SRM-202ENST00000459997 LYPD6Q86Y78 171 aa16.6■□□□□ 0.25
SRM-202ENST00000459997 TMEM104Q8NE00 496 aa16.6■□□□□ 0.25
SRM-202ENST00000459997 GFOD1Q9NXC2 390 aa16.6■□□□□ 0.25
SRM-202ENST00000459997 TRAPPC2LQ9UL33 140 aa16.6■□□□□ 0.25
SRM-202ENST00000459997 PEX16Q9Y5Y5 336 aa16.6■□□□□ 0.25
SRM-202ENST00000459997 CCRL2O00421 344 aa16.59■□□□□ 0.25
SRM-202ENST00000459997 GAPDHP04406 335 aaKnown RBP16.59■□□□□ 0.25
SRM-202ENST00000459997 PF4V1P10720 104 aa16.59■□□□□ 0.25
SRM-202ENST00000459997 REG1BP48304 166 aa16.59■□□□□ 0.25
SRM-202ENST00000459997 LOXL3P58215 753 aa16.59■□□□□ 0.25
SRM-202ENST00000459997 ZNF816Q0VGE8 651 aaPredicted RBP16.59■□□□□ 0.25
SRM-202ENST00000459997 OXLD1Q5BKU9 147 aa16.59■□□□□ 0.25
SRM-202ENST00000459997 SYT6Q5T7P8 510 aaPredicted RBP16.59■□□□□ 0.25
SRM-202ENST00000459997 FAM53AQ6NSI3 398 aaPredicted RBP16.59■□□□□ 0.25
SRM-202ENST00000459997 MOB3BQ86TA1 216 aa16.59■□□□□ 0.25
SRM-202ENST00000459997 C5orf56Q8N8D9 126 aa16.59■□□□□ 0.25
SRM-202ENST00000459997 OR4K15Q8NH41 348 aa16.59■□□□□ 0.25
SRM-202ENST00000459997 UQCC2Q9BRT2 126 aa16.59■□□□□ 0.25
SRM-202ENST00000459997 TSSC4Q9Y5U2 329 aaPredicted RBP16.59■□□□□ 0.25
SRM-202ENST00000459997 IGHV1-3A0A0C4DH29 117 aa16.58■□□□□ 0.24
SRM-202ENST00000459997 FAM90A10PA6NDY2 464 aa16.58■□□□□ 0.24
SRM-202ENST00000459997 FAM90A7PA6NKC0 464 aa16.58■□□□□ 0.24
SRM-202ENST00000459997 FAM90A23PA8MXZ1 464 aa16.58■□□□□ 0.24
SRM-202ENST00000459997 C12orf77C9JDV5 145 aa16.58■□□□□ 0.24
SRM-202ENST00000459997 SPINT2O43291 252 aa16.58■□□□□ 0.24
SRM-202ENST00000459997 PRB2P02812 416 aaPredicted RBP16.58■□□□□ 0.24
SRM-202ENST00000459997 KHDC1LQ5JSQ8 128 aa16.58■□□□□ 0.24
SRM-202ENST00000459997 C6orf183Q5T699 404 aa16.58■□□□□ 0.24
SRM-202ENST00000459997 PRR18Q8N4B5 295 aa16.58■□□□□ 0.24
SRM-202ENST00000459997 MS4A15Q8N5U1 240 aa16.58■□□□□ 0.24
SRM-202ENST00000459997 LINC00311Q8N616 119 aa16.58■□□□□ 0.24
SRM-202ENST00000459997 C8orf31Q8N9H6 132 aa16.58■□□□□ 0.24
SRM-202ENST00000459997 UFD1Q92890 307 aa16.58■□□□□ 0.24
SRM-202ENST00000459997 TMEM203Q969S6 136 aa16.58■□□□□ 0.24
SRM-202ENST00000459997 FAM46BQ96A09 425 aa16.58■□□□□ 0.24
SRM-202ENST00000459997 Q96M66 194 aa16.58■□□□□ 0.24
SRM-202ENST00000459997 IGHV3-72A0A0B4J1Y9 119 aa16.57■□□□□ 0.24
SRM-202ENST00000459997 DENRO43583 198 aaKnown RBP16.57■□□□□ 0.24
SRM-202ENST00000459997 FUT3P21217 361 aa16.57■□□□□ 0.24
SRM-202ENST00000459997 IL3RAP26951 378 aa16.57■□□□□ 0.24
SRM-202ENST00000459997 RPS25P62851 125 aaKnown RBP16.57■□□□□ 0.24
SRM-202ENST00000459997 GPR50Q13585 617 aa16.57■□□□□ 0.24
SRM-202ENST00000459997 TPBGQ13641 420 aa16.57■□□□□ 0.24
SRM-202ENST00000459997 RAB9BQ9NP90 201 aa16.57■□□□□ 0.24
SRM-202ENST00000459997 GNG12Q9UBI6 72 aa16.57■□□□□ 0.24
SRM-202ENST00000459997 UBE2QL1A1L167 161 aa16.56■□□□□ 0.24
SRM-202ENST00000459997 PSMB11A5LHX3 300 aa16.56■□□□□ 0.24
SRM-202ENST00000459997 FGF16O43320 207 aa16.56■□□□□ 0.24
SRM-202ENST00000459997 SC5DO75845 299 aa16.56■□□□□ 0.24
SRM-202ENST00000459997 CD33P20138 364 aa16.56■□□□□ 0.24
SRM-202ENST00000459997 Q3ZCU0 254 aa16.56■□□□□ 0.24
SRM-202ENST00000459997 SIGIRRQ6IA17 410 aa16.56■□□□□ 0.24
SRM-202ENST00000459997 CEACAM19Q7Z692 300 aa16.56■□□□□ 0.24
SRM-202ENST00000459997 GAPTQ8N292 157 aa16.56■□□□□ 0.24
SRM-202ENST00000459997 MGLLQ99685 303 aa16.56■□□□□ 0.24
SRM-202ENST00000459997 CST11Q9H112 138 aa16.56■□□□□ 0.24
SRM-202ENST00000459997 Q9H521 79 aa16.56■□□□□ 0.24
SRM-202ENST00000459997 ISYNA1Q9NPH2 558 aa16.56■□□□□ 0.24
SRM-202ENST00000459997 GHRLQ9UBU3 117 aa16.56■□□□□ 0.24
SRM-202ENST00000459997 BLOC1S6Q9UL45 172 aa16.56■□□□□ 0.24
SRM-202ENST00000459997 SLC31A2O15432 143 aa16.55■□□□□ 0.24
SRM-202ENST00000459997 PDCD6O75340 191 aa16.55■□□□□ 0.24
SRM-202ENST00000459997 CA11O75493 328 aa16.55■□□□□ 0.24
SRM-202ENST00000459997 HBZP02008 142 aa16.55■□□□□ 0.24
SRM-202ENST00000459997 PF4P02776 101 aa16.55■□□□□ 0.24
SRM-202ENST00000459997 GLAP06280 429 aa16.55■□□□□ 0.24
SRM-202ENST00000459997 RCC1P18754 421 aaPredicted RBP16.55■□□□□ 0.24
SRM-202ENST00000459997 MLLT11Q13015 90 aaPredicted RBP16.55■□□□□ 0.24
SRM-202ENST00000459997 EBI3Q14213 229 aa16.55■□□□□ 0.24
SRM-202ENST00000459997 TBCEQ15813 527 aaPredicted RBP16.55■□□□□ 0.24
SRM-202ENST00000459997 TMEM30BQ3MIR4 351 aa16.55■□□□□ 0.24
SRM-202ENST00000459997 TRAT1Q6PIZ9 186 aa16.55■□□□□ 0.24
SRM-202ENST00000459997 TMEM91Q6ZNR0 172 aa16.55■□□□□ 0.24
SRM-202ENST00000459997 LRRTM1Q86UE6 522 aa16.55■□□□□ 0.24
SRM-202ENST00000459997 IZUMO1Q8IYV9 350 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms