RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 ZNF418Q8TF45 676 aaPredicted RBP10.42□□□□□ -0.74
COL18A1-206ENST00000459895 ARL11Q969Q4 196 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 DUX5Q96PT3 197 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 TAF9BQ9HBM6 251 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 ABRACLQ9P1F3 81 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 SPATA2Q9UM82 520 aa10.42□□□□□ -0.74
COL18A1-206ENST00000459895 TRBV6-6A0A0A6YYG2 114 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 METTL21EPA6NDL7 271 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 TMEM235A6NFC5 223 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 F2RL2O00254 374 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 SDCBPO00560 298 aaPredicted RBP10.41□□□□□ -0.74
COL18A1-206ENST00000459895 ORC5O43913 435 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 TMEM127O75204 238 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 EIF4EP06730 217 aaKnown RBP10.41□□□□□ -0.74
COL18A1-206ENST00000459895 MELTFP08582 738 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 FCGR3AP08637 254 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 FBP1P09467 338 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 TMBIM6P55061 237 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 FAM189A2Q15884 450 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 OR52W1Q6IF63 320 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 TRAT1Q6PIZ9 186 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 LDLRAD3Q86YD5 345 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 DYNAPQ8N1N2 210 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 SAMD12Q8N8I0 201 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 ZDHHC22Q8N966 263 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 NUDCD2Q8WVJ2 157 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 MAFIPQ8WZ33 124 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 KCTD12Q96CX2 325 aaKnown RBP10.41□□□□□ -0.74
COL18A1-206ENST00000459895 CMSS1Q9BQ75 279 aaKnown RBP10.41□□□□□ -0.74
COL18A1-206ENST00000459895 BCL7BQ9BQE9 202 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 CEPT1Q9Y6K0 416 aa10.41□□□□□ -0.74
COL18A1-206ENST00000459895 SERPINE3A8MV23 424 aa10.4□□□□□ -0.74
COL18A1-206ENST00000459895 SPINT2O43291 252 aa10.4□□□□□ -0.74
COL18A1-206ENST00000459895 HOXA3O43365 443 aaPredicted RBP10.4□□□□□ -0.74
COL18A1-206ENST00000459895 SCGNO76038 276 aa10.4□□□□□ -0.74
COL18A1-206ENST00000459895 IGLV1-47P01700 117 aa10.4□□□□□ -0.74
COL18A1-206ENST00000459895 IGHV4-59P01825 116 aa10.4□□□□□ -0.74
COL18A1-206ENST00000459895 CD3GP09693 182 aa10.4□□□□□ -0.74
COL18A1-206ENST00000459895 LOXL3P58215 753 aa10.4□□□□□ -0.74
COL18A1-206ENST00000459895 HLA-DRB5Q30154 266 aa10.4□□□□□ -0.74
COL18A1-206ENST00000459895 PLA1AQ53H76 456 aa10.4□□□□□ -0.74
COL18A1-206ENST00000459895 IZUMO1Q8IYV9 350 aa10.4□□□□□ -0.74
COL18A1-206ENST00000459895 ABHD12Q8N2K0 398 aa10.4□□□□□ -0.74
COL18A1-206ENST00000459895 OR10V1Q8NGI7 309 aa10.4□□□□□ -0.74
COL18A1-206ENST00000459895 PRDM13Q9H4Q3 707 aa10.4□□□□□ -0.74
COL18A1-206ENST00000459895 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.4□□□□□ -0.747e-6■□□□□ 11
COL18A1-206ENST00000459895 GFOD1Q9NXC2 390 aa10.4□□□□□ -0.74
COL18A1-206ENST00000459895 CCDC59Q9P031 241 aaKnown RBP10.4□□□□□ -0.74
COL18A1-206ENST00000459895 TBL2Q9Y4P3 447 aaKnown RBP10.4□□□□□ -0.74
COL18A1-206ENST00000459895 JMJD1CQ15652 2540 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 A0A1W2PPE3 182 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 SLC31A2O15432 143 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 GZMHP20718 246 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 UBA52P62987 128 aaKnown RBP10.39□□□□□ -0.75
COL18A1-206ENST00000459895 BAMBIQ13145 260 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 TMEM30BQ3MIR4 351 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 RBMS3Q6XE24 437 aaKnown RBP10.39□□□□□ -0.75
COL18A1-206ENST00000459895 ZNF554Q86TJ5 538 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 ZNF439Q8NDP4 499 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 BEND2Q8NDZ0 799 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 OR10A7Q8NGE5 316 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 OR9G1Q8NH87 305 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 DYNC2LI1Q8TCX1 351 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 GCDHQ92947 438 aaPredicted RBP10.39□□□□□ -0.75
COL18A1-206ENST00000459895 Q9N2K0 584 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 KCNIP1Q9NZI2 227 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 COMMD3Q9UBI1 195 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 PSG11Q9UQ72 335 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 FAM96BQ9Y3D0 163 aa10.39□□□□□ -0.75
COL18A1-206ENST00000459895 FBN1P35555 2871 aaKnown RBP10.39□□□□□ -0.75
COL18A1-206ENST00000459895 SSX5O60225 188 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 HPGDSO60760 199 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 GSTP1P09211 210 aaKnown RBP10.38□□□□□ -0.75
COL18A1-206ENST00000459895 PTHLHP12272 177 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 PPP1CCP36873 323 aaKnown RBP10.38□□□□□ -0.75
COL18A1-206ENST00000459895 RORCP51449 518 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 LGALS4P56470 323 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 MRPS15P82914 257 aaKnown RBP10.38□□□□□ -0.75
COL18A1-206ENST00000459895 ARFRP1Q13795 201 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 HERPUD1Q15011 391 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 SLC9A3R2Q15599 337 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 KRTAP24-1Q3LI83 254 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 ZNF260Q3ZCT1 412 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 Q6YL49 198 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 DTX3Q8N9I9 347 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 OR52L2PQ8NGH6 319 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 OR52M1Q8NGK5 317 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 ZNF596Q8TC21 504 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 IL1F10Q8WWZ1 152 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 ZDHHC16Q969W1 377 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 ABCG5Q9H222 651 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 MMP28Q9H239 520 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 RIMS4Q9H426 269 aaPredicted RBP10.38□□□□□ -0.75
COL18A1-206ENST00000459895 TNFRSF19Q9NS68 423 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 OR1A1Q9P1Q5 309 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 GNG12Q9UBI6 72 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 ZNF230Q9UIE0 474 aaPredicted RBP10.38□□□□□ -0.75
COL18A1-206ENST00000459895 JPT1Q9UK76 154 aa10.38□□□□□ -0.75
COL18A1-206ENST00000459895 TRAV18A0A075B6X5 111 aa10.37□□□□□ -0.75
COL18A1-206ENST00000459895 IGKV1D-8A0A087WSZ0 117 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms