RNA–Protein interactions for RNA: ENST00000459756.5

COL7A1-203, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 5

Gene COL7A1, Length 818 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-203ENST00000459756 RAB7AP51149 207 aa12.89□□□□□ -0.35
COL7A1-203ENST00000459756 RPS25P62851 125 aaKnown RBP12.89□□□□□ -0.35
COL7A1-203ENST00000459756 MLLT11Q13015 90 aaPredicted RBP12.89□□□□□ -0.35
COL7A1-203ENST00000459756 TRAM1Q15629 374 aa12.89□□□□□ -0.35
COL7A1-203ENST00000459756 TMEM30BQ3MIR4 351 aa12.89□□□□□ -0.35
COL7A1-203ENST00000459756 C1orf100Q5SVJ3 147 aa12.89□□□□□ -0.35
COL7A1-203ENST00000459756 C6orf183Q5T699 404 aa12.89□□□□□ -0.35
COL7A1-203ENST00000459756 ZNF773Q6PK81 442 aa12.89□□□□□ -0.35
COL7A1-203ENST00000459756 Q6ZS46 218 aa12.89□□□□□ -0.35
COL7A1-203ENST00000459756 THNSL2Q86YJ6 484 aa12.89□□□□□ -0.35
COL7A1-203ENST00000459756 C11orf44Q8N8P7 122 aa12.89□□□□□ -0.35
COL7A1-203ENST00000459756 C8orf31Q8N9H6 132 aa12.89□□□□□ -0.35
COL7A1-203ENST00000459756 FAM46BQ96A09 425 aa12.89□□□□□ -0.35
COL7A1-203ENST00000459756 WNT10AQ9GZT5 417 aa12.89□□□□□ -0.35
COL7A1-203ENST00000459756 TRAPPC2LQ9UL33 140 aa12.89□□□□□ -0.35
COL7A1-203ENST00000459756 FAM90A9PA6NNJ1 464 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 C12orf77C9JDV5 145 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 M0QZK8 103 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 SPINT2O43291 252 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 MRPS14O60783 128 aaKnown RBP12.88□□□□□ -0.35
COL7A1-203ENST00000459756 PDCD6O75340 191 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 FBXO24O75426 580 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 CD37P11049 281 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 CPEP16870 476 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 LOXL3P58215 753 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 NEDD8Q15843 81 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 Q3ZCU0 254 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 KCTD21Q4G0X4 260 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 SYT6Q5T7P8 510 aaPredicted RBP12.88□□□□□ -0.35
COL7A1-203ENST00000459756 SIGIRRQ6IA17 410 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 TRAT1Q6PIZ9 186 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 OR8H3Q8N146 312 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 LINC00311Q8N616 119 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 FAM110DQ8TAY7 271 aaPredicted RBP12.88□□□□□ -0.35
COL7A1-203ENST00000459756 WIPF2Q8TF74 440 aaPredicted RBP12.88□□□□□ -0.35
COL7A1-203ENST00000459756 GFOD1Q9NXC2 390 aa12.88□□□□□ -0.35
COL7A1-203ENST00000459756 A0A1W2PPE3 182 aa12.87□□□□□ -0.35
COL7A1-203ENST00000459756 A0A1W2PPI3 338 aa12.87□□□□□ -0.35
COL7A1-203ENST00000459756 SLC22A1O15245 554 aa12.87□□□□□ -0.35
COL7A1-203ENST00000459756 TNFAIP8O95379 198 aa12.87□□□□□ -0.35
COL7A1-203ENST00000459756 MPIG6BO95866 241 aa12.87□□□□□ -0.35
COL7A1-203ENST00000459756 HTR2CP28335 458 aa12.87□□□□□ -0.35
COL7A1-203ENST00000459756 DRAM1Q8N682 238 aa12.87□□□□□ -0.35
COL7A1-203ENST00000459756 OR6M1Q8NGM8 313 aa12.87□□□□□ -0.35
COL7A1-203ENST00000459756 OR4K15Q8NH41 348 aa12.87□□□□□ -0.35
COL7A1-203ENST00000459756 OR56B4Q8NH76 319 aa12.87□□□□□ -0.35
COL7A1-203ENST00000459756 KCNG3Q8TAE7 436 aa12.87□□□□□ -0.35
COL7A1-203ENST00000459756 UBALD1Q8TB05 177 aa12.87□□□□□ -0.35
COL7A1-203ENST00000459756 OCSTAMPQ9BR26 566 aa12.87□□□□□ -0.35
COL7A1-203ENST00000459756 UBE2QL1A1L167 161 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 HSD17B6O14756 317 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 ARL6IP5O75915 188 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 GAPDHP04406 335 aaKnown RBP12.86□□□□□ -0.35
COL7A1-203ENST00000459756 AMY1AP04745 511 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 AMY2AP04746 511 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 SNRNP70P08621 437 aaKnown RBP12.86□□□□□ -0.35
COL7A1-203ENST00000459756 VSIG8P0DPA2 414 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 CD28P10747 220 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 RPS27AP62979 156 aaKnown RBP12.86□□□□□ -0.35
COL7A1-203ENST00000459756 ZNF816Q0VGE8 651 aaPredicted RBP12.86□□□□□ -0.35
COL7A1-203ENST00000459756 DIAPH2-AS1Q14236 149 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 TMEM95Q3KNT9 176 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 ABCA11PQ4W5N1 156 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 FBLN7Q53RD9 439 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 TMEM91Q6ZNR0 172 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 ZNF554Q86TJ5 538 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 TMEM59Q9BXS4 323 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 GNG12Q9UBI6 72 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 MOB4Q9Y3A3 225 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 NOTCH1P46531 2555 aa12.86□□□□□ -0.35
COL7A1-203ENST00000459756 CCRL2O00421 344 aa12.85□□□□□ -0.35
COL7A1-203ENST00000459756 BPNT1O95861 308 aa12.85□□□□□ -0.35
COL7A1-203ENST00000459756 HBZP02008 142 aa12.85□□□□□ -0.35
COL7A1-203ENST00000459756 RCC1P18754 421 aaPredicted RBP12.85□□□□□ -0.35
COL7A1-203ENST00000459756 IL3RAP26951 378 aa12.85□□□□□ -0.35
COL7A1-203ENST00000459756 CHATP28329 748 aa12.85□□□□□ -0.35
COL7A1-203ENST00000459756 SSX1Q16384 188 aa12.85□□□□□ -0.35
COL7A1-203ENST00000459756 NKAPLQ5M9Q1 402 aa12.85□□□□□ -0.35
COL7A1-203ENST00000459756 UBE2UQ5VVX9 321 aa12.85□□□□□ -0.35
COL7A1-203ENST00000459756 OR10K2Q6IF99 312 aa12.85□□□□□ -0.35
COL7A1-203ENST00000459756 TSPAN14Q8NG11 270 aa12.85□□□□□ -0.35
COL7A1-203ENST00000459756 FCGR1BQ92637 280 aa12.85□□□□□ -0.35
COL7A1-203ENST00000459756 NEDD4LQ96PU5 975 aa12.85□□□□□ -0.35
COL7A1-203ENST00000459756 MBNL3Q9NUK0 354 aaKnown RBP12.85□□□□□ -0.35
COL7A1-203ENST00000459756 KCNIP1Q9NZI2 227 aa12.85□□□□□ -0.35
COL7A1-203ENST00000459756 IGHV3-43A0A0B4J1X8 118 aa12.84□□□□□ -0.35
COL7A1-203ENST00000459756 LPLP06858 475 aa12.84□□□□□ -0.35
COL7A1-203ENST00000459756 IGHV3-43DP0DP04 118 aa12.84□□□□□ -0.35
COL7A1-203ENST00000459756 TMEM11P17152 192 aa12.84□□□□□ -0.35
COL7A1-203ENST00000459756 QRFPP83859 136 aa12.84□□□□□ -0.35
COL7A1-203ENST00000459756 UNC119Q13432 240 aa12.84□□□□□ -0.35
COL7A1-203ENST00000459756 HES1Q14469 280 aa12.84□□□□□ -0.35
COL7A1-203ENST00000459756 STEAP3Q658P3 488 aa12.84□□□□□ -0.35
COL7A1-203ENST00000459756 HIST2H2BDQ6DRA6 164 aa12.84□□□□□ -0.35
COL7A1-203ENST00000459756 NDUFA11Q86Y39 141 aa12.84□□□□□ -0.35
COL7A1-203ENST00000459756 PRR18Q8N4B5 295 aa12.84□□□□□ -0.35
COL7A1-203ENST00000459756 OR1L1Q8NH94 360 aa12.84□□□□□ -0.35
COL7A1-203ENST00000459756 MRPL30Q8TCC3 161 aaKnown RBP12.84□□□□□ -0.35
COL7A1-203ENST00000459756 CITED2Q99967 270 aaPredicted RBP12.84□□□□□ -0.35
COL7A1-203ENST00000459756 TM2D1Q9BX74 207 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms