RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 RTL8AQ9BWD3 113 aa15.62■□□□□ 0.09
SEMA3B-209ENST00000456560 EIF5A2Q9GZV4 153 aaKnown RBP15.62■□□□□ 0.09
SEMA3B-209ENST00000456560 GSN-AS1Q9NRJ2 163 aa15.62■□□□□ 0.09
SEMA3B-209ENST00000456560 A0A1W2PPH5 198 aa15.61■□□□□ 0.09
SEMA3B-209ENST00000456560 FAM24AA6NFZ4 105 aa15.61■□□□□ 0.09
SEMA3B-209ENST00000456560 DEGS1O15121 323 aa15.61■□□□□ 0.09
SEMA3B-209ENST00000456560 SMPD2O60906 423 aa15.61■□□□□ 0.09
SEMA3B-209ENST00000456560 DAOP14920 347 aa15.61■□□□□ 0.09
SEMA3B-209ENST00000456560 POLR2GP62487 172 aaKnown RBP eCLIP15.61■□□□□ 0.09
SEMA3B-209ENST00000456560 FABP9Q0Z7S8 132 aa15.61■□□□□ 0.09
SEMA3B-209ENST00000456560 CMTM1Q8IZ96 169 aa15.61■□□□□ 0.09
SEMA3B-209ENST00000456560 IL22RA2Q969J5 263 aa15.61■□□□□ 0.09
SEMA3B-209ENST00000456560 NIT2Q9NQR4 276 aa15.61■□□□□ 0.09
SEMA3B-209ENST00000456560 OR2W1Q9Y3N9 320 aa15.61■□□□□ 0.09
SEMA3B-209ENST00000456560 CEP250Q9BV73 2442 aa15.61■□□□□ 0.09
SEMA3B-209ENST00000456560 ESPL1Q14674 2120 aa15.61■□□□□ 0.09
SEMA3B-209ENST00000456560 MED12LQ86YW9 2145 aa15.61■□□□□ 0.09
SEMA3B-209ENST00000456560 IGSF23A1L1A6 192 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 H0Y980 276 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 DLL1O00548 723 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 VDAC1P21796 283 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 IGHV1-2P23083 117 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 LMO1P25800 156 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 ERVK11-1P61568 191 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 ID3Q02535 119 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 CXorf66Q5JRM2 361 aaPredicted RBP15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 COMMD1Q8N668 190 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 SCRT1Q9BWW7 348 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 CLCF1Q9UBD9 225 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 LRP5LA4QPB2 252 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 IGHG3P01860 377 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 CD82P27701 267 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 CAMLGP49069 296 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 PPP1CBP62140 327 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 P4HA3Q7Z4N8 544 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 KDF1Q8NAX2 398 aaPredicted RBP15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 SH3BGRL3Q9H299 93 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 TUBA4BQ9H853 241 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 GLRX2Q9NS18 164 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 LUZP4Q9P127 313 aa15.6■□□□□ 0.09
SEMA3B-209ENST00000456560 NPIPB11E5RHQ5 1161 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 FTH1P19P0C7X4 201 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 RAB5CP51148 216 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 SCCPDHQ8NBX0 429 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 OR10J5Q8NHC4 309 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 TCEAL7Q9BRU2 100 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 OR2J1Q9GZK6 312 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 SEBOXQ9HB31 216 aaPredicted RBP15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 METTL1Q9UBP6 276 aaKnown RBP15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 STRAPQ9Y3F4 350 aaKnown RBP15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 hCG_1809904A0A1W2PP81 198 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 A0A1W2PR64 198 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 A0A1W2PRV1 198 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 CDRT15L2A8MXV6 281 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 WNT2P09544 360 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 RAB5AP20339 215 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 F2RP25116 425 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 LURAP1LQ8IV03 231 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 ODF3L1Q8IXM7 274 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 PLEKHF2Q9H8W4 249 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 CDH20Q9HBT6 801 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 LYRM2Q9NU23 88 aaPredicted RBP15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 TREM2Q9NZC2 230 aa15.59■□□□□ 0.09
SEMA3B-209ENST00000456560 A0A1W2PR80 420 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 NKX2-8O15522 239 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 TNFSF12O43508 249 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 MMP9P14780 707 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 MDH2P40926 338 aaKnown RBP15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 ASCL1P50553 236 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 TGFBR3Q03167 851 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 MRPL49Q13405 166 aaKnown RBP15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 HSD17B11Q8NBQ5 300 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 MAGT1Q9H0U3 335 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 C19orf12Q9NSK7 152 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 DCHS1Q96JQ0 3298 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 UMAD1C9J7I0 102 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 PROB1E7EW31 1015 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 PITX3O75364 302 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 PRH1P02810 166 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 FHITP49789 147 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 IDH3GP51553 393 aaPredicted RBP15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 UBE2NP61088 152 aaKnown RBP15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 ERVS71-1P61550 626 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 GUSBP1Q15486 140 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 GABRA6Q16445 453 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 ALKBH6Q3KRA9 238 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 Q8IYB0 196 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 TMEM252Q8N6L7 170 aa15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 ERRFI1Q9UJM3 462 aaPredicted RBP15.58■□□□□ 0.08
SEMA3B-209ENST00000456560 SLC33A1O00400 549 aaPredicted RBP15.57■□□□□ 0.08
SEMA3B-209ENST00000456560 SSSCA1O60232 199 aa15.57■□□□□ 0.08
SEMA3B-209ENST00000456560 TMEM50AO95807 157 aa15.57■□□□□ 0.08
SEMA3B-209ENST00000456560 RAC2P15153 192 aa15.57■□□□□ 0.08
SEMA3B-209ENST00000456560 FAM209BQ5JX69 171 aa15.57■□□□□ 0.08
SEMA3B-209ENST00000456560 ZNF497Q6ZNH5 498 aa15.57■□□□□ 0.08
SEMA3B-209ENST00000456560 FAM24BQ8N5W8 94 aa15.57■□□□□ 0.08
SEMA3B-209ENST00000456560 CD300LFQ8TDQ1 290 aa15.57■□□□□ 0.08
SEMA3B-209ENST00000456560 SLC25A31Q9H0C2 315 aa15.57■□□□□ 0.08
SEMA3B-209ENST00000456560 TAAR3PQ9P1P4 343 aa15.57■□□□□ 0.08
SEMA3B-209ENST00000456560 OR1A1Q9P1Q5 309 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms