RNA–Protein interactions for RNA: ENST00000456246.1

MSH6-207, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 846 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-207ENST00000456246 TMEM104Q8NE00 496 aa14.24□□□□□ -0.13
MSH6-207ENST00000456246 OR4X2Q8NGF9 303 aa14.24□□□□□ -0.13
MSH6-207ENST00000456246 CCDC107Q8WV48 283 aa14.24□□□□□ -0.13
MSH6-207ENST00000456246 UFD1Q92890 307 aa14.24□□□□□ -0.13
MSH6-207ENST00000456246 TMED9Q9BVK6 235 aa14.24□□□□□ -0.13
MSH6-207ENST00000456246 ANKRD60Q9BZ19 345 aa14.24□□□□□ -0.13
MSH6-207ENST00000456246 BANF2Q9H503 90 aa14.24□□□□□ -0.13
MSH6-207ENST00000456246 TXNL1O43396 289 aa14.23□□□□□ -0.13
MSH6-207ENST00000456246 PDCD6O75340 191 aa14.23□□□□□ -0.13
MSH6-207ENST00000456246 AMY1AP04745 511 aa14.23□□□□□ -0.13
MSH6-207ENST00000456246 AMY2AP04746 511 aa14.23□□□□□ -0.13
MSH6-207ENST00000456246 TMEM11P17152 192 aa14.23□□□□□ -0.13
MSH6-207ENST00000456246 MYF6P23409 242 aa14.23□□□□□ -0.13
MSH6-207ENST00000456246 HSPA13P48723 471 aa14.23□□□□□ -0.13
MSH6-207ENST00000456246 LOXL3P58215 753 aa14.23□□□□□ -0.13
MSH6-207ENST00000456246 CD83Q01151 205 aa14.23□□□□□ -0.13
MSH6-207ENST00000456246 IRF3Q14653 427 aa14.23□□□□□ -0.13
MSH6-207ENST00000456246 TRAM1Q15629 374 aa14.23□□□□□ -0.13
MSH6-207ENST00000456246 HSD17B12Q53GQ0 312 aa14.23□□□□□ -0.13
MSH6-207ENST00000456246 RBM48Q5RL73 367 aaKnown RBP14.23□□□□□ -0.13
MSH6-207ENST00000456246 NRG4Q8WWG1 115 aa14.23□□□□□ -0.13
MSH6-207ENST00000456246 R3HDM4Q96D70 268 aa14.23□□□□□ -0.13
MSH6-207ENST00000456246 DUSP21Q9H596 190 aa14.23□□□□□ -0.13
MSH6-207ENST00000456246 CMYA5Q8N3K9 4069 aa14.22□□□□□ -0.13
MSH6-207ENST00000456246 C12orf77C9JDV5 145 aa14.22□□□□□ -0.13
MSH6-207ENST00000456246 PSMA1P25786 263 aaKnown RBP14.22□□□□□ -0.13
MSH6-207ENST00000456246 C1orf100Q5SVJ3 147 aa14.22□□□□□ -0.13
MSH6-207ENST00000456246 STEAP3Q658P3 488 aa14.22□□□□□ -0.13
MSH6-207ENST00000456246 IZUMO1Q8IYV9 350 aa14.22□□□□□ -0.13
MSH6-207ENST00000456246 OR4K15Q8NH41 348 aa14.22□□□□□ -0.13
MSH6-207ENST00000456246 ISYNA1Q9NPH2 558 aa14.22□□□□□ -0.13
MSH6-207ENST00000456246 KCNIP1Q9NZI2 227 aa14.22□□□□□ -0.13
MSH6-207ENST00000456246 GNG12Q9UBI6 72 aa14.22□□□□□ -0.13
MSH6-207ENST00000456246 NOTCH3Q9UM47 2321 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 PLXNB1O43157 2135 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 IGHV1-3A0A0C4DH29 117 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 ADARB2-AS1A8MUL3 147 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 RGS10O43665 173 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 IGKV1D-33P01593 117 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 IGKV1-33P01594 117 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 UCHL1P09936 223 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 SRMP19623 302 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 RANBP1P43487 201 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 ZNF137PP52743 207 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 EBI3Q14213 229 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 DIAPH2-AS1Q14236 149 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 FBLN7Q53RD9 439 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 C9orf152Q5JTZ5 239 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 SLC25A48Q6ZT89 311 aaKnown RBP14.21□□□□□ -0.13
MSH6-207ENST00000456246 CEACAM19Q7Z692 300 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 LRRTM1Q86UE6 522 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 LYG1Q8N1E2 194 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 C5orf56Q8N8D9 126 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 KCNG3Q8TAE7 436 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 NEDD4LQ96PU5 975 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 TMEM59Q9BXS4 323 aa14.21□□□□□ -0.13
MSH6-207ENST00000456246 MBNL3Q9NUK0 354 aaKnown RBP14.21□□□□□ -0.13
MSH6-207ENST00000456246 TSSC4Q9Y5U2 329 aaPredicted RBP14.21□□□□□ -0.13
MSH6-207ENST00000456246 A0A1W2PPE3 182 aa14.2□□□□□ -0.14
MSH6-207ENST00000456246 MPIG6BO95866 241 aa14.2□□□□□ -0.14
MSH6-207ENST00000456246 HBZP02008 142 aa14.2□□□□□ -0.14
MSH6-207ENST00000456246 TPBGQ13641 420 aa14.2□□□□□ -0.14
MSH6-207ENST00000456246 INSL4Q14641 139 aa14.2□□□□□ -0.14
MSH6-207ENST00000456246 FAM27D1Q5T7N8 215 aa14.2□□□□□ -0.14
MSH6-207ENST00000456246 SAMD5Q5TGI4 173 aa14.2□□□□□ -0.14
MSH6-207ENST00000456246 LIPKQ5VXJ0 399 aa14.2□□□□□ -0.14
MSH6-207ENST00000456246 HIST2H2BDQ6DRA6 164 aa14.2□□□□□ -0.14
MSH6-207ENST00000456246 SIGIRRQ6IA17 410 aa14.2□□□□□ -0.14
MSH6-207ENST00000456246 MOB3BQ86TA1 216 aa14.2□□□□□ -0.14
MSH6-207ENST00000456246 OR2T10Q8NGZ9 312 aa14.2□□□□□ -0.14
MSH6-207ENST00000456246 ST6GALNAC6Q969X2 333 aa14.2□□□□□ -0.14
MSH6-207ENST00000456246 FAM46BQ96A09 425 aa14.2□□□□□ -0.14
MSH6-207ENST00000456246 LRRC42Q9Y546 428 aa14.2□□□□□ -0.14
MSH6-207ENST00000456246 IGHV3-43A0A0B4J1X8 118 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 TCRBV4S1A1TA0A5B7 111 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 SLC22A1O15245 554 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 ARL6IP5O75915 188 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 BPNT1O95861 308 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 IGHV3-43DP0DP04 118 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 VSIG8P0DPA2 414 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 PF4V1P10720 104 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 CD37P11049 281 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 RCC1P18754 421 aaPredicted RBP14.19□□□□□ -0.14
MSH6-207ENST00000456246 HTR2CP28335 458 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 CD1BP29016 333 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 GP2P55259 537 aaKnown RBP14.19□□□□□ -0.14
MSH6-207ENST00000456246 RPS27AP62979 156 aaKnown RBP14.19□□□□□ -0.14
MSH6-207ENST00000456246 MLLT11Q13015 90 aaPredicted RBP14.19□□□□□ -0.14
MSH6-207ENST00000456246 KPRPQ5T749 579 aaPredicted RBP14.19□□□□□ -0.14
MSH6-207ENST00000456246 PRSS48Q7RTY5 328 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 C1QL4Q86Z23 238 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 PRR18Q8N4B5 295 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 ZNF439Q8NDP4 499 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 OR6M1Q8NGM8 313 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 UBALD1Q8TB05 177 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 CHPT1Q8WUD6 406 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 RTN4IP1Q8WWV3 396 aaPredicted RBP14.19□□□□□ -0.14
MSH6-207ENST00000456246 TAF9BQ9HBM6 251 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 JPT1Q9UK76 154 aa14.19□□□□□ -0.14
MSH6-207ENST00000456246 BLOC1S6Q9UL45 172 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms