RNA–Protein interactions for RNA: ENST00000454612.6

DDR1-240, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene DDR1, Length 3,942 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-240ENST00000454612 ZNF66Q6ZN08 573 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 DBX2Q6ZNG2 339 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 LPAR3Q9UBY5 353 aa9.65□□□□□ -0.86
DDR1-240ENST00000454612 C3orf85A0A1B0GTC6 90 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 E5RGE8 158 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 TRGC2P03986 189 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 CD74P04233 296 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 TBPP20226 339 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 MEOX1P50221 254 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 NCR3LG1Q68D85 454 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 TOMM20LQ6UXN7 152 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 ZNF709Q8N972 641 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 TMEM18Q96B42 140 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 RPUSD4Q96CM3 377 aaKnown RBP9.64□□□□□ -0.87
DDR1-240ENST00000454612 RBMXL1Q96E39 390 aaKnown RBP9.64□□□□□ -0.87
DDR1-240ENST00000454612 FOXJ2Q9P0K8 574 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 LAMP3Q9UQV4 416 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 LIPGQ9Y5X9 500 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 TLN1Q9Y490 2541 aaKnown RBP9.64□□□□□ -0.87
DDR1-240ENST00000454612 PPP1CCP36873 323 aaKnown RBP9.64□□□□□ -0.87
DDR1-240ENST00000454612 ERVS71-1P61550 626 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 SMIM15Q7Z3B0 74 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 SPIN2AQ99865 258 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 SPIN2BQ9BPZ2 258 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 DDA1Q9BW61 102 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 MUC6Q6W4X9 2439 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 EML6Q6ZMW3 1958 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 SPAARA0A1B0GVQ0 90 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 A0A1W2PPQ1 181 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 KLF7O75840 302 aaPredicted RBP9.64□□□□□ -0.87
DDR1-240ENST00000454612 RAC2P15153 192 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 CDX1P47902 265 aaPredicted RBP9.64□□□□□ -0.87
DDR1-240ENST00000454612 FAM27BQ5VT28 67 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 SPSB1Q96BD6 273 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 C14orf144Q96I85 54 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 HS3ST6Q96QI5 342 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 RARRES2Q99969 163 aa9.64□□□□□ -0.87
DDR1-240ENST00000454612 ZNF552Q9H707 407 aaPredicted RBP9.64□□□□□ -0.87
DDR1-240ENST00000454612 SERPINA7P05543 415 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 PTGDSP41222 190 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 HGFACQ04756 655 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 FAM210BQ96KR6 192 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 PARD6AQ9NPB6 346 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 CACNG5Q9UF02 275 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 LRP4O75096 1905 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 ZGRF1Q86YA3 2104 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 DBX1A6NMT0 343 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 PROB1E7EW31 1015 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 CST4P01036 141 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 RPLP1P05386 114 aaKnown RBP9.63□□□□□ -0.87
DDR1-240ENST00000454612 ZNF708P17019 499 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 GCH1P30793 250 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 NTF4P34130 210 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 FOXO1Q12778 655 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 MPV17LQ2QL34 196 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 Q5PR19 223 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 FAM166AQ6J272 317 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 DTX1Q86Y01 620 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 CPEB3Q8NE35 698 aaKnown RBP9.63□□□□□ -0.87
DDR1-240ENST00000454612 MRGPRFQ96AM1 343 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 OR2J1Q9GZK6 312 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 WNT5BQ9H1J7 359 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 RALYQ9UKM9 306 aaKnown RBP9.63□□□□□ -0.87
DDR1-240ENST00000454612 CACNA1AO00555 2505 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 PTBP3O95758 552 aaKnown RBP9.63□□□□□ -0.87
DDR1-240ENST00000454612 SP9P0CG40 484 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 DYNLT3P51808 116 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 UBE2G2P60604 165 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 TLE4Q04727 773 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 DEFB109BQ30KR1 87 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 HES3Q5TGS1 186 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 DHRS11Q6UWP2 260 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 SPNS3Q6ZMD2 512 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 NUFIP2Q7Z417 695 aaKnown RBP9.63□□□□□ -0.87
DDR1-240ENST00000454612 OR2C3Q8N628 320 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 DMBX1Q8NFW5 382 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 TP53RKQ96S44 253 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 C19orf12Q9NSK7 152 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 IGKV1-12A0A0C4DH73 117 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 C5orf52A6NGY3 159 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 SLC22A20A6NK97 555 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 FIGNL2A6NMB9 653 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 RHBDL1O75783 438 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 IGKV1D-12P01611 117 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 ZNF17P17021 662 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 CEACAM6P40199 344 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 FAM3AP98173 230 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 C17orf82Q86X59 251 aaPredicted RBP9.63□□□□□ -0.87
DDR1-240ENST00000454612 MRGPRDQ8TDS7 321 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 IL22RA2Q969J5 263 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 ANGPTL4Q9BY76 406 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 SLC2A8Q9NY64 477 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 RCC2Q9P258 522 aaKnown RBP9.63□□□□□ -0.87
DDR1-240ENST00000454612 V9GYS6 101 aa9.63□□□□□ -0.87
DDR1-240ENST00000454612 IGKV1-27A0A075B6S5 117 aa9.62□□□□□ -0.87
DDR1-240ENST00000454612 KLRC4-KLRK1H3BQV0 150 aa9.62□□□□□ -0.87
DDR1-240ENST00000454612 MPPED1O15442 326 aa9.62□□□□□ -0.87
DDR1-240ENST00000454612 TMEM11P17152 192 aa9.62□□□□□ -0.87
DDR1-240ENST00000454612 SOX8P57073 446 aa9.62□□□□□ -0.87
DDR1-240ENST00000454612 SUPT4H1P63272 117 aaKnown RBP9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 73.8 ms