RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 CCRL2O00421 344 aa12.4□□□□□ -0.42
LIMS1-210ENST00000449684 WIPF1O43516 503 aa12.4□□□□□ -0.42
LIMS1-210ENST00000449684 CA11O75493 328 aa12.4□□□□□ -0.42
LIMS1-210ENST00000449684 GAPDHP04406 335 aaKnown RBP12.4□□□□□ -0.42
LIMS1-210ENST00000449684 GLAP06280 429 aa12.4□□□□□ -0.42
LIMS1-210ENST00000449684 TMEM11P17152 192 aa12.4□□□□□ -0.42
LIMS1-210ENST00000449684 SRMP19623 302 aa12.4□□□□□ -0.42
LIMS1-210ENST00000449684 VHLP40337 213 aa12.4□□□□□ -0.42
LIMS1-210ENST00000449684 TRAM1Q15629 374 aa12.4□□□□□ -0.42
LIMS1-210ENST00000449684 IZUMO2Q6UXV1 221 aa12.4□□□□□ -0.42
LIMS1-210ENST00000449684 MOB3BQ86TA1 216 aa12.4□□□□□ -0.42
LIMS1-210ENST00000449684 THNSL2Q86YJ6 484 aa12.4□□□□□ -0.42
LIMS1-210ENST00000449684 OR5AU1Q8NGC0 362 aa12.4□□□□□ -0.42
LIMS1-210ENST00000449684 CNBD2Q96M20 576 aa12.4□□□□□ -0.42
LIMS1-210ENST00000449684 Q96M66 194 aa12.4□□□□□ -0.42
LIMS1-210ENST00000449684 GFOD1Q9NXC2 390 aa12.4□□□□□ -0.42
LIMS1-210ENST00000449684 LSM2Q9Y333 95 aaKnown RBP12.4□□□□□ -0.42
LIMS1-210ENST00000449684 MOB4Q9Y3A3 225 aa12.4□□□□□ -0.42
LIMS1-210ENST00000449684 C15orf65H3BRN8 121 aa12.39□□□□□ -0.43
LIMS1-210ENST00000449684 HSD17B6O14756 317 aa12.39□□□□□ -0.43
LIMS1-210ENST00000449684 PDCD6O75340 191 aa12.39□□□□□ -0.43
LIMS1-210ENST00000449684 HNF4GQ14541 408 aa12.39□□□□□ -0.43
LIMS1-210ENST00000449684 IRF3Q14653 427 aa12.39□□□□□ -0.43
LIMS1-210ENST00000449684 NDUFA11Q86Y39 141 aa12.39□□□□□ -0.43
LIMS1-210ENST00000449684 R3HDM4Q96D70 268 aa12.39□□□□□ -0.43
LIMS1-210ENST00000449684 CITED2Q99967 270 aaPredicted RBP12.39□□□□□ -0.43
LIMS1-210ENST00000449684 OCSTAMPQ9BR26 566 aa12.39□□□□□ -0.43
LIMS1-210ENST00000449684 WNT10AQ9GZT5 417 aa12.39□□□□□ -0.43
LIMS1-210ENST00000449684 DUSP21Q9H596 190 aa12.39□□□□□ -0.43
LIMS1-210ENST00000449684 BLOC1S6Q9UL45 172 aa12.39□□□□□ -0.43
LIMS1-210ENST00000449684 SH2D7A6NKC9 451 aaPredicted RBP12.38□□□□□ -0.43
LIMS1-210ENST00000449684 C12orf77C9JDV5 145 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 KCNAB3O43448 404 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 ARL6IP5O75915 188 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 IGKV1D-33P01593 117 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 IGKV1-33P01594 117 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 HBZP02008 142 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 PSMA1P25786 263 aaKnown RBP12.38□□□□□ -0.43
LIMS1-210ENST00000449684 HTR2CP28335 458 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 REG1BP48304 166 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 DIAPH2-AS1Q14236 149 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 TMEM30BQ3MIR4 351 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 OR10K2Q6IF99 312 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 PRSS48Q7RTY5 328 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 LRRTM1Q86UE6 522 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 LYPD6Q86Y78 171 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 OR4F17Q8NGA8 305 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 OR10V1Q8NGI7 309 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 KCNG3Q8TAE7 436 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 OR4F4Q96R69 305 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 TMEM59Q9BXS4 323 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 PLGRKTQ9HBL7 147 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 ISYNA1Q9NPH2 558 aa12.38□□□□□ -0.43
LIMS1-210ENST00000449684 A0A1W2PPI3 338 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 FAM90A9PA6NNJ1 464 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 OPN1MWP04001 364 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 UCHL1P09936 223 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 OPN1MW2P0DN77 364 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 OPN1MW3P0DN78 364 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 RCC1P18754 421 aaPredicted RBP12.37□□□□□ -0.43
LIMS1-210ENST00000449684 CRHBPP24387 322 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 GP2P55259 537 aaKnown RBP12.37□□□□□ -0.43
LIMS1-210ENST00000449684 TPBGQ13641 420 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 Q3ZCU0 254 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 C1orf100Q5SVJ3 147 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 C1QL4Q86Z23 238 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 LINC00311Q8N616 119 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 C8orf31Q8N9H6 132 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 OR4X2Q8NGF9 303 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 OR6M1Q8NGM8 313 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 TAF9BQ9HBM6 251 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 CHMP1AQ9HD42 196 aaPredicted RBP12.37□□□□□ -0.43
LIMS1-210ENST00000449684 OR2S2Q9NQN1 319 aa12.37□□□□□ -0.43
LIMS1-210ENST00000449684 IGHV3-72A0A0B4J1Y9 119 aa12.36□□□□□ -0.43
LIMS1-210ENST00000449684 IGHV1-3A0A0C4DH29 117 aa12.36□□□□□ -0.43
LIMS1-210ENST00000449684 A0A1W2PRX2 142 aa12.36□□□□□ -0.43
LIMS1-210ENST00000449684 TCRBV4S1A1TA0A5B7 111 aa12.36□□□□□ -0.43
LIMS1-210ENST00000449684 NCBP2LA6PVI3 153 aaKnown RBP12.36□□□□□ -0.43
LIMS1-210ENST00000449684 VSIG8P0DPA2 414 aa12.36□□□□□ -0.43
LIMS1-210ENST00000449684 RANBP1P43487 201 aa12.36□□□□□ -0.43
LIMS1-210ENST00000449684 MAP2K4P45985 399 aa12.36□□□□□ -0.43
LIMS1-210ENST00000449684 LOXL3P58215 753 aa12.36□□□□□ -0.43
LIMS1-210ENST00000449684 RPS25P62851 125 aaKnown RBP12.36□□□□□ -0.43
LIMS1-210ENST00000449684 RPS27AP62979 156 aaKnown RBP12.36□□□□□ -0.43
LIMS1-210ENST00000449684 ZNF816Q0VGE8 651 aaPredicted RBP12.36□□□□□ -0.43
LIMS1-210ENST00000449684 MLLT11Q13015 90 aaPredicted RBP12.36□□□□□ -0.43
LIMS1-210ENST00000449684 FBLN7Q53RD9 439 aa12.36□□□□□ -0.43
LIMS1-210ENST00000449684 KHDC1LQ5JSQ8 128 aa12.36□□□□□ -0.43
LIMS1-210ENST00000449684 OR1L1Q8NH94 360 aa12.36□□□□□ -0.43
LIMS1-210ENST00000449684 MGLLQ99685 303 aa12.36□□□□□ -0.43
LIMS1-210ENST00000449684 URM1Q9BTM9 101 aaKnown RBP12.36□□□□□ -0.43
LIMS1-210ENST00000449684 NOTCH1P46531 2555 aa12.36□□□□□ -0.43
LIMS1-210ENST00000449684 SC5DO75845 299 aa12.35□□□□□ -0.43
LIMS1-210ENST00000449684 BPNT1O95861 308 aa12.35□□□□□ -0.43
LIMS1-210ENST00000449684 AMY1AP04745 511 aa12.35□□□□□ -0.43
LIMS1-210ENST00000449684 AMY2AP04746 511 aa12.35□□□□□ -0.43
LIMS1-210ENST00000449684 PF4V1P10720 104 aa12.35□□□□□ -0.43
LIMS1-210ENST00000449684 ARSBP15848 533 aa12.35□□□□□ -0.43
LIMS1-210ENST00000449684 CPEP16870 476 aa12.35□□□□□ -0.43
LIMS1-210ENST00000449684 CALRP27797 417 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms