RNA–Protein interactions for RNA: ENST00000449082.2

SCN10A-201, Transcript of sodium voltage-gated channel alpha subunit 10, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN10A, Length 6,418 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10A-201ENST00000449082 HOGA1Q86XE5 327 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 ST6GALNAC2Q9UJ37 374 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 VSIG4Q9Y279 399 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 RNF115Q9Y4L5 304 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 DUXBA0A1W2PPF3 345 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 CD1AP06126 327 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 REG1BP48304 166 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 FGF12P61328 243 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 ZNF154Q13106 437 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 CDCP2Q5VXM1 449 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 SLC25A47Q6Q0C1 308 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 OR1L6Q8NGR2 347 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 DYRK2Q92630 601 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 GPA33Q99795 319 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 PRR13Q9NZ81 148 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 LRRC37AA6NMS7 1700 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 HPRT1P00492 218 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 HPXP02790 462 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 ZNF883P0CG24 379 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 SCARF2Q96GP6 870 aaPredicted RBP8.86□□□□□ -0.99
SCN10A-201ENST00000449082 RP1L1Q8IWN7 2480 aaPredicted RBP8.86□□□□□ -0.99
SCN10A-201ENST00000449082 PSG2P11465 335 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 MC5RP33032 325 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 PCOLCEQ15113 449 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 SSMEM1Q8WWF3 244 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 KLHDC2Q9Y2U9 406 aa8.86□□□□□ -0.99
SCN10A-201ENST00000449082 A0A1W2PPE3 182 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 ZP3P21754 424 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 KIR3DL2P43630 455 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 SULT1A1P50225 295 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 IRF3Q14653 427 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 KHDC3LQ587J8 217 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 C19orf48Q6RUI8 117 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 MRPL24Q96A35 216 aaKnown RBP8.85□□□□□ -0.99
SCN10A-201ENST00000449082 P2RX4Q99571 388 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 MAP1BP46821 2468 aaKnown RBP8.85□□□□□ -0.99
SCN10A-201ENST00000449082 TAF1LQ8IZX4 1826 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 TEX50A0A1B0GTY4 177 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 FCN1O00602 326 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 CRHP06850 196 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 APELAP0DMC3 54 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 LOXL3P58215 753 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 INPP5JQ15735 1006 aaPredicted RBP8.85□□□□□ -0.99
SCN10A-201ENST00000449082 LINC00052Q96N35 136 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 PCM1Q15154 2024 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 IGSF23A1L1A6 192 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 TEPPQ6URK8 271 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 SNX22Q96L94 193 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 LOC101059948A0A1B0GTJ6 334 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 NKX2-6A6NCS4 301 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 RBFOX3A6NFN3 312 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 WFDC3Q8IUB2 231 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 TMEM37Q8WXS4 190 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 STARD4Q96DR4 205 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 KCNK17Q96T54 332 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 ZNF552Q9H707 407 aaPredicted RBP8.85□□□□□ -0.99
SCN10A-201ENST00000449082 MED19A0JLT2 244 aaPredicted RBP8.85□□□□□ -0.99
SCN10A-201ENST00000449082 KIAA1324LA8MWY0 1029 aaPredicted RBP8.85□□□□□ -0.99
SCN10A-201ENST00000449082 HTN1P15515 57 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 TMEM50BP56557 158 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 OR8G5Q8NG78 346 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 GPX7Q96SL4 187 aaPredicted RBP8.85□□□□□ -0.99
SCN10A-201ENST00000449082 NAT8Q9UHE5 227 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 HILPDAQ9Y5L2 63 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 KIF13BQ9NQT8 1826 aa8.85□□□□□ -0.99
SCN10A-201ENST00000449082 SMIM10L1P0DMW3 83 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 HIST1H3AP68431 136 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 ZNF273Q14593 569 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 FAM209AQ5JX71 171 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 SMIM10Q96HG1 83 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 MS4A3Q96HJ5 214 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 LNP1A1A4G5 178 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 C11orf94C9JXX5 98 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 FABP4P15090 132 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 GFRA1P56159 465 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 NHLH1Q02575 133 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 NHLH2Q02577 135 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 C19orf57Q0VDD7 668 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 RSPO4Q2I0M5 234 aaPredicted RBP8.84□□□□□ -0.99
SCN10A-201ENST00000449082 NSUN5P2Q63ZY6 315 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 LURAP1Q96LR2 239 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 FOXJ2Q9P0K8 574 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 IL17BQ9UHF5 180 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 RGS13O14921 159 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 P01737 135 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 FCGR3AP08637 254 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 FSTP19883 344 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 MPV17P39210 176 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 ATP1A1-AS1Q5TC04 95 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 C16orf82Q7Z2V1 217 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 BVESQ8NE79 360 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 PARP11Q9NR21 331 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 ZNFX1Q9P2E3 1918 aaKnown RBP8.84□□□□□ -0.99
SCN10A-201ENST00000449082 NUP214P35658 2090 aaPredicted RBP8.84□□□□□ -0.99
SCN10A-201ENST00000449082 HBZP02008 142 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 OR5AL1P0C617 328 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 TMEM97Q5BJF2 176 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 TMEM91Q6ZNR0 172 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 LYZL2Q7Z4W2 148 aa8.84□□□□□ -0.99
SCN10A-201ENST00000449082 CALHM1Q8IU99 346 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms