RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 RUNX1Q01196 453 aa13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 KIAA0141Q14154 515 aaPredicted RBP13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 ATP6AP1Q15904 470 aa13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 DNAL1Q4LDG9 190 aa13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 AMIGO2Q86SJ2 522 aa13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 OR10V1Q8NGI7 309 aa13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 MYOZ3Q8TDC0 251 aa13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 ARPC1AQ92747 370 aa13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 OR4C12Q96R67 309 aa13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 S100A13Q99584 98 aa13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 IMPAD1Q9NX62 359 aa13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 GNG12Q9UBI6 72 aa13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 SACSQ9NZJ4 4579 aa13.96□□□□□ -0.17
CHCHD3-203ENST00000448878 TRAV41A0A0B4J266 112 aa13.95□□□□□ -0.18
CHCHD3-203ENST00000448878 LINC01619G3V211 115 aa13.95□□□□□ -0.18
CHCHD3-203ENST00000448878 PAX5Q02548 391 aa13.95□□□□□ -0.18
CHCHD3-203ENST00000448878 SLC25A48Q6ZT89 311 aaKnown RBP13.95□□□□□ -0.18
CHCHD3-203ENST00000448878 PARP16Q8N5Y8 322 aa13.95□□□□□ -0.18
CHCHD3-203ENST00000448878 C8orf31Q8N9H6 132 aa13.95□□□□□ -0.18
CHCHD3-203ENST00000448878 OR5AK2Q8NH90 309 aa13.95□□□□□ -0.18
CHCHD3-203ENST00000448878 MRPL48Q96GC5 212 aaKnown RBP13.95□□□□□ -0.18
CHCHD3-203ENST00000448878 METTL9Q9H1A3 318 aa13.95□□□□□ -0.18
CHCHD3-203ENST00000448878 SORL1Q92673 2214 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 AIPO00170 330 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 GEMIN2O14893 280 aaKnown RBP13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 ORC5O43913 435 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 IGHV4-30-4P0DP06 118 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 FASP25445 335 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 SOX2P48431 317 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 PITPNAQ00169 270 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 GALEQ14376 348 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 LHFPL3Q86UP9 236 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 STX19Q8N4C7 294 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 ACBD7Q8N6N7 88 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 OR51A2Q8NGJ7 313 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 OR52N1Q8NH53 320 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 PDCD1LG2Q9BQ51 273 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 ZNF251Q9BRH9 671 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 TM2D3Q9BRN9 247 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 GABARAPL1Q9H0R8 117 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 TRAPPC2LQ9UL33 140 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 ERGIC3Q9Y282 383 aa13.94□□□□□ -0.18
CHCHD3-203ENST00000448878 A0A1W2PN81 502 aa13.93□□□□□ -0.18
CHCHD3-203ENST00000448878 MAGEA13PA6NCF6 341 aa13.93□□□□□ -0.18
CHCHD3-203ENST00000448878 SPINT2O43291 252 aa13.93□□□□□ -0.18
CHCHD3-203ENST00000448878 ATP8B1O43520 1251 aa13.93□□□□□ -0.18
CHCHD3-203ENST00000448878 IGLV1-40P01703 118 aa13.93□□□□□ -0.18
CHCHD3-203ENST00000448878 SERPINA2P20848 420 aa13.93□□□□□ -0.18
CHCHD3-203ENST00000448878 CHRNA7P36544 502 aa13.93□□□□□ -0.18
CHCHD3-203ENST00000448878 ZNF134P52741 427 aa13.93□□□□□ -0.18
CHCHD3-203ENST00000448878 ECSCRQ19T08 205 aa13.93□□□□□ -0.18
CHCHD3-203ENST00000448878 ACSM6Q6P461 480 aa13.93□□□□□ -0.18
CHCHD3-203ENST00000448878 CASTOR1Q8WTX7 329 aa13.93□□□□□ -0.18
CHCHD3-203ENST00000448878 RSRP1Q9BUV0 290 aa13.93□□□□□ -0.18
CHCHD3-203ENST00000448878 EDA2RQ9HAV5 297 aa13.93□□□□□ -0.18
CHCHD3-203ENST00000448878 ZNF580Q9UK33 172 aa13.93□□□□□ -0.18
CHCHD3-203ENST00000448878 IGHV4OR15-8A0A075B7B6 117 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 A0A087WW49 117 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 TMEM212A6NML5 194 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 JTBO76095 146 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 MT-ND4P03905 459 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 RPSAP08865 295 aaKnown RBP13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 OR8U9P0C7N5 309 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 CNTFRP26992 372 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 RBM11P57052 281 aaKnown RBP13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 ACTBP60709 375 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 LSAMPQ13449 338 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 CT45A1Q5HYN5 189 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 LIN54Q6MZP7 749 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 HAPLN4Q86UW8 402 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 SGPP2Q8IWX5 399 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 CT45A3Q8NHU0 189 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 MYCBPQ99417 103 aaPredicted RBP13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 ALG8Q9BVK2 526 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 ANKRD60Q9BZ19 345 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 ISG20L2Q9H9L3 353 aaKnown RBP13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 RAB9BQ9NP90 201 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 TAS2R4Q9NYW5 299 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 A3GALT2U3KPV4 340 aa13.92□□□□□ -0.18
CHCHD3-203ENST00000448878 IGHV7-81A0A0B4J1V7 117 aa13.91□□□□□ -0.18
CHCHD3-203ENST00000448878 J3QRE1 110 aa13.91□□□□□ -0.18
CHCHD3-203ENST00000448878 BLVRBP30043 206 aaPredicted RBP13.91□□□□□ -0.18
CHCHD3-203ENST00000448878 Q3ZCU0 254 aa13.91□□□□□ -0.18
CHCHD3-203ENST00000448878 SYT6Q5T7P8 510 aaPredicted RBP13.91□□□□□ -0.18
CHCHD3-203ENST00000448878 OR4K15Q8NH41 348 aa13.91□□□□□ -0.18
CHCHD3-203ENST00000448878 ABHD5Q8WTS1 349 aa13.91□□□□□ -0.18
CHCHD3-203ENST00000448878 TRUB1Q8WWH5 349 aaKnown RBP13.91□□□□□ -0.18
CHCHD3-203ENST00000448878 RITA1Q96K30 269 aa13.91□□□□□ -0.18
CHCHD3-203ENST00000448878 GABARAPL3Q9BY60 117 aa13.91□□□□□ -0.18
CHCHD3-203ENST00000448878 TOLLIPQ9H0E2 274 aa13.91□□□□□ -0.18
CHCHD3-203ENST00000448878 KIAA1456Q9P272 454 aa13.91□□□□□ -0.18
CHCHD3-203ENST00000448878 MRPS28Q9Y2Q9 187 aaKnown RBP13.91□□□□□ -0.18
CHCHD3-203ENST00000448878 DNAH7Q8WXX0 4024 aa13.9□□□□□ -0.18
CHCHD3-203ENST00000448878 FAM90A10PA6NDY2 464 aa13.9□□□□□ -0.18
CHCHD3-203ENST00000448878 C12orf77C9JDV5 145 aa13.9□□□□□ -0.18
CHCHD3-203ENST00000448878 DYNC1I1O14576 645 aa13.9□□□□□ -0.18
CHCHD3-203ENST00000448878 NBR2O15453 112 aa13.9□□□□□ -0.18
CHCHD3-203ENST00000448878 IGHV3-11P01762 117 aa13.9□□□□□ -0.18
CHCHD3-203ENST00000448878 HLA-DRB1P01911 266 aa13.9□□□□□ -0.18
CHCHD3-203ENST00000448878 VHLP40337 213 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms