RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 RAB9BQ9NP90 201 aa16.12■□□□□ 0.17
SGCE-207ENST00000447873 TAS2R3Q9NYW6 316 aa16.12■□□□□ 0.17
SGCE-207ENST00000447873 CALYQ9NYX4 217 aa16.12■□□□□ 0.17
SGCE-207ENST00000447873 KBTBD11-OT1A0A1B0GTJ5 212 aa16.11■□□□□ 0.17
SGCE-207ENST00000447873 A0A1W2PPH5 198 aa16.11■□□□□ 0.17
SGCE-207ENST00000447873 DISC1C4P0D8 188 aa16.11■□□□□ 0.17
SGCE-207ENST00000447873 C15orf65H3BRN8 121 aa16.11■□□□□ 0.17
SGCE-207ENST00000447873 BET1O15155 118 aa16.11■□□□□ 0.17
SGCE-207ENST00000447873 OR5H8P0DN80 308 aa16.11■□□□□ 0.17
SGCE-207ENST00000447873 CGB3P0DN86 165 aa16.11■□□□□ 0.17
SGCE-207ENST00000447873 CGB7P0DN87 165 aa16.11■□□□□ 0.17
SGCE-207ENST00000447873 TSPAN5P62079 268 aa16.11■□□□□ 0.17
SGCE-207ENST00000447873 HERPUD1Q15011 391 aa16.11■□□□□ 0.17
SGCE-207ENST00000447873 ZNF782Q6ZMW2 699 aaPredicted RBP16.11■□□□□ 0.17
SGCE-207ENST00000447873 OR56B4Q8NH76 319 aa16.11■□□□□ 0.17
SGCE-207ENST00000447873 C8orf46Q8TAG6 207 aa16.11■□□□□ 0.17
SGCE-207ENST00000447873 CSMD1Q96PZ7 3565 aa16.1■□□□□ 0.17
SGCE-207ENST00000447873 PPIAL4CA0A0B4J2A2 164 aa16.1■□□□□ 0.17
SGCE-207ENST00000447873 IGKV1-6A0A0C4DH72 117 aa16.1■□□□□ 0.17
SGCE-207ENST00000447873 C22orf46C9J442 243 aa16.1■□□□□ 0.17
SGCE-207ENST00000447873 FOXH1O75593 365 aa16.1■□□□□ 0.17
SGCE-207ENST00000447873 PPIAL4GP0DN37 164 aa16.1■□□□□ 0.17
SGCE-207ENST00000447873 ZFP36P26651 326 aaKnown RBP16.1■□□□□ 0.17
SGCE-207ENST00000447873 LCN2P80188 198 aa16.1■□□□□ 0.17
SGCE-207ENST00000447873 C17orf58Q2M2W7 97 aa16.1■□□□□ 0.17
SGCE-207ENST00000447873 Q96MF0 132 aa16.1■□□□□ 0.17
SGCE-207ENST00000447873 SLC6A7Q99884 636 aa16.1■□□□□ 0.17
SGCE-207ENST00000447873 FOXC2Q99958 501 aa16.1■□□□□ 0.17
SGCE-207ENST00000447873 GINS4Q9BRT9 223 aa16.1■□□□□ 0.17
SGCE-207ENST00000447873 SLC23A1Q9UHI7 598 aa16.1■□□□□ 0.17
SGCE-207ENST00000447873 ARHGAP32A7KAX9 2087 aa16.1■□□□□ 0.17
SGCE-207ENST00000447873 KIAA1324LA8MWY0 1029 aaPredicted RBP16.09■□□□□ 0.17
SGCE-207ENST00000447873 A8MXK9 166 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 HSPA12AO43301 675 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 ZNF728P0DKX0 622 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 CCL3L1P16619 93 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 RGS21Q2M5E4 152 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 SCGB2B2Q4G0G5 96 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 TMEM17Q86X19 198 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 KRTAP1-3Q8IUG1 177 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 ARRDC1Q8N5I2 433 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 LY6G5BQ8NDX9 201 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 OR51S1Q8NGJ8 323 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 OR10J5Q8NHC4 309 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 CABLES2Q9BTV7 478 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 CCDC168Q8NDH2 2452 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 MED13LQ71F56 2210 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 BAHCC1Q9P281 2608 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 FAM157AC9JC47 383 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 NPIPB11E5RHQ5 1161 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 DIRAS3O95661 229 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 LIPFP07098 398 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 ZNF735P0CB33 412 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 OMGP23515 440 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 ZBTB25P24278 435 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 LTC4SQ16873 150 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 OR6F1Q8NGZ6 308 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 PRRT1Q99946 306 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 LINC00574Q9H8X3 128 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 SCP2D1Q9UJQ7 156 aa16.09■□□□□ 0.17
SGCE-207ENST00000447873 TRBV6-7A0A0A0MS04 114 aa16.08■□□□□ 0.16
SGCE-207ENST00000447873 FAM240BA0A1B0GVZ2 78 aa16.08■□□□□ 0.16
SGCE-207ENST00000447873 FPR2P25090 351 aa16.08■□□□□ 0.16
SGCE-207ENST00000447873 FCGR2CP31995 323 aa16.08■□□□□ 0.16
SGCE-207ENST00000447873 HTD2P86397 168 aa16.08■□□□□ 0.16
SGCE-207ENST00000447873 ENKURQ8TC29 256 aa16.08■□□□□ 0.16
SGCE-207ENST00000447873 OR2S2Q9NQN1 319 aa16.08■□□□□ 0.16
SGCE-207ENST00000447873 IDI2-AS1Q9NZ38 188 aa16.08■□□□□ 0.16
SGCE-207ENST00000447873 OR1A1Q9P1Q5 309 aa16.08■□□□□ 0.16
SGCE-207ENST00000447873 RNF223E7ERA6 249 aa16.07■□□□□ 0.16
SGCE-207ENST00000447873 F2RL2O00254 374 aa16.07■□□□□ 0.16
SGCE-207ENST00000447873 ENSAO43768 121 aaKnown RBP16.07■□□□□ 0.16
SGCE-207ENST00000447873 NFYAP23511 347 aaPredicted RBP16.07■□□□□ 0.16
SGCE-207ENST00000447873 BTCP35070 178 aa16.07■□□□□ 0.16
SGCE-207ENST00000447873 DHRS11Q6UWP2 260 aa16.07■□□□□ 0.16
SGCE-207ENST00000447873 IDO2Q6ZQW0 420 aa16.07■□□□□ 0.16
SGCE-207ENST00000447873 OR52L2PQ8NGH6 319 aa16.07■□□□□ 0.16
SGCE-207ENST00000447873 ZNF2Q9BSG1 426 aaPredicted RBP16.07■□□□□ 0.16
SGCE-207ENST00000447873 TMPRSS13Q9BYE2 586 aa16.07■□□□□ 0.16
SGCE-207ENST00000447873 REG4Q9BYZ8 158 aa16.07■□□□□ 0.16
SGCE-207ENST00000447873 GNG12Q9UBI6 72 aa16.07■□□□□ 0.16
SGCE-207ENST00000447873 A0A096LNT2 108 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 IGHV3-43A0A0B4J1X8 118 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 PTTG1O95997 202 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 IGHV3-43DP0DP04 118 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 SLC6A1P30531 599 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 CEACAM6P40199 344 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 CCR6P51684 374 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 LOXL1Q08397 574 aaPredicted RBP16.06■□□□□ 0.16
SGCE-207ENST00000447873 PRAMEF5Q5TYX0 476 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 HEPN1Q6WQI6 88 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 NRARPQ7Z6K4 114 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 OR10A7Q8NGE5 316 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 GIMAP1Q8WWP7 306 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 DPAGT1Q9H3H5 408 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 LPAR2Q9HBW0 351 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 SLC2A8Q9NY64 477 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 ONECUT1Q9UBC0 465 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 ZNF69Q9UC07 566 aa16.06■□□□□ 0.16
SGCE-207ENST00000447873 PRRC2AP48634 2157 aaKnown RBP16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms