RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ZNF57Q68EA5 555 aaPredicted RBP2.3□□□□□ -2.04
PMS1-215ENST00000447232 ZNF66Q6ZN08 573 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 DPY19L2P2Q6ZN68 376 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 MOB3CQ70IA8 216 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 LINC00311Q8N616 119 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 ZNF781Q8N8C0 355 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 C11orf65Q8NCR3 313 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 NPBQ8NG41 125 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 ZNRF2Q8NHG8 242 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 ZNRF4Q8WWF5 429 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 PGAM5Q96HS1 289 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 FAM210BQ96KR6 192 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 KRTAP1-5Q9BYS1 174 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 NSRP1Q9H0G5 558 aaKnown RBP2.3□□□□□ -2.04
PMS1-215ENST00000447232 PARP12Q9H0J9 701 aaKnown RBP2.3□□□□□ -2.04
PMS1-215ENST00000447232 IDI2-AS1Q9NZ38 188 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 VAPAQ9P0L0 249 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 PSMC3IPQ9P2W1 217 aaPredicted RBP2.3□□□□□ -2.04
PMS1-215ENST00000447232 RHCGQ9UBD6 479 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 CD300AQ9UGN4 299 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 MLXQ9UH92 298 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 RPL36Q9Y3U8 105 aaKnown RBP2.3□□□□□ -2.04
PMS1-215ENST00000447232 A3GALT2U3KPV4 340 aa2.3□□□□□ -2.04
PMS1-215ENST00000447232 DNAH8Q96JB1 4490 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 IGHV4-28A0A0C4DH34 117 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 TVP23AA6NH52 213 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 COPEO14579 308 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 ARPC3O15145 178 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 NBR2O15453 112 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 TXNL1O43396 289 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 IL1AP01583 271 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 MT1HL1P0DM35 61 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 TNFRSF1BP20333 461 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 CBLN1P23435 193 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 HSD11B1P28845 292 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 CD40LGP29965 261 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 HTR1FP30939 366 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 PAFAH1B1P43034 410 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 RPS6KA3P51812 740 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 KRTAP10-4P60372 401 aaPredicted RBP2.29□□□□□ -2.04
PMS1-215ENST00000447232 ST3GAL3Q11203 375 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 PLAC9Q5JTB6 97 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 TEX30Q5JUR7 227 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 TMEM42Q69YG0 159 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 UNQ5815/PRO19632Q6UWF5 114 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 ASCL4Q6XD76 172 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 PPP1R27Q86WC6 154 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 RNF113BQ8IZP6 322 aaKnown RBP2.29□□□□□ -2.04
PMS1-215ENST00000447232 OR2C3Q8N628 320 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 C8orf31Q8N9H6 132 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 POC5Q8NA72 575 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 LFNGQ8NES3 379 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 SPATA4Q8NEY3 305 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 MRGPRDQ8TDS7 321 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 RNF133Q8WVZ7 376 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 SNAPC3Q92966 411 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 RPL36ALQ969Q0 106 aaKnown RBP2.29□□□□□ -2.04
PMS1-215ENST00000447232 CEP19Q96LK0 163 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 RDH12Q96NR8 316 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 SRSF8Q9BRL6 282 aaKnown RBP2.29□□□□□ -2.04
PMS1-215ENST00000447232 YTHDF1Q9BYJ9 559 aaKnown RBP2.29□□□□□ -2.04
PMS1-215ENST00000447232 KRT84Q9NSB2 600 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 CALYQ9NYX4 217 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 DNAJC27Q9NZQ0 273 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 UBQLN2Q9UHD9 624 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 RNF150Q9ULK6 438 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 CELA1Q9UNI1 258 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 SH3GLB1Q9Y371 365 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 SELENOKQ9Y6D0 94 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 A0A087WUU8 490 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 TRAV25A0A0B4J276 109 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 ITM2AO43736 263 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 NRASP01111 189 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 IGLV3-1P01715 115 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 HIST1H1CP16403 213 aaKnown RBP2.29□□□□□ -2.04
PMS1-215ENST00000447232 AADACP22760 399 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 DUSP1P28562 367 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 OPRL1P41146 370 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 TMEM30BQ3MIR4 351 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 ZNF684Q5T5D7 378 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 MBOAT2Q6ZWT7 520 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 TRPM8Q7Z2W7 1104 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 ENTHD1Q8IYW4 607 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 C15orf53Q8NAA6 179 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 SPC24Q8NBT2 197 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 OR10A7Q8NGE5 316 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 OR9I1Q8NGQ6 314 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 OR1L6Q8NGR2 347 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 CACNG8Q8WXS5 425 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 PRRC1Q96M27 445 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 FAM103A1Q9BTL3 118 aaKnown RBP2.29□□□□□ -2.04
PMS1-215ENST00000447232 QTRT1Q9BXR0 403 aaKnown RBP2.29□□□□□ -2.04
PMS1-215ENST00000447232 SDR39U1Q9NRG7 319 aaPredicted RBP2.29□□□□□ -2.04
PMS1-215ENST00000447232 FAM212BQ9NTI7 297 aaPredicted RBP2.29□□□□□ -2.04
PMS1-215ENST00000447232 DCAF13Q9NV06 445 aaKnown RBP2.29□□□□□ -2.04
PMS1-215ENST00000447232 GAB2Q9UQC2 676 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 SAR1BQ9Y6B6 198 aa2.29□□□□□ -2.04
PMS1-215ENST00000447232 TMEM213A2RRL7 107 aa2.28□□□□□ -2.04
PMS1-215ENST00000447232 FCN1O00602 326 aa2.28□□□□□ -2.04
PMS1-215ENST00000447232 SDHDO14521 159 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 721.3 ms