RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 A6NDX4 124 aa11.93□□□□□ -0.5
HDAC4-204ENST00000446876 LEUTXA8MZ59 168 aa11.93□□□□□ -0.5
HDAC4-204ENST00000446876 LY6LH3BQJ8 138 aa11.93□□□□□ -0.5
HDAC4-204ENST00000446876 SDCBPO00560 298 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-204ENST00000446876 PDCD5O14737 125 aa11.93□□□□□ -0.5
HDAC4-204ENST00000446876 SOCS1O15524 211 aa11.93□□□□□ -0.5
HDAC4-204ENST00000446876 ORC5O43913 435 aa11.93□□□□□ -0.5
HDAC4-204ENST00000446876 GLAP06280 429 aa11.93□□□□□ -0.5
HDAC4-204ENST00000446876 GZMHP20718 246 aa11.93□□□□□ -0.5
HDAC4-204ENST00000446876 BLVRBP30043 206 aaPredicted RBP11.93□□□□□ -0.5
HDAC4-204ENST00000446876 KRTAP10-3P60369 221 aa11.93□□□□□ -0.5
HDAC4-204ENST00000446876 DIAPH2-AS1Q14236 149 aa11.93□□□□□ -0.5
HDAC4-204ENST00000446876 C2orf76Q3KRA6 126 aa11.93□□□□□ -0.5
HDAC4-204ENST00000446876 Q6ZPA2 131 aa11.93□□□□□ -0.5
HDAC4-204ENST00000446876 OR10A7Q8NGE5 316 aa11.93□□□□□ -0.5
HDAC4-204ENST00000446876 WFDC12Q8WWY7 111 aa11.93□□□□□ -0.5
HDAC4-204ENST00000446876 STEAP1Q9UHE8 339 aa11.93□□□□□ -0.5
HDAC4-204ENST00000446876 RNF114Q9Y508 228 aa11.93□□□□□ -0.5
HDAC4-204ENST00000446876 POM121CA8CG34 1229 aa11.92□□□□□ -0.5
HDAC4-204ENST00000446876 LDLRAD4O15165 306 aa11.92□□□□□ -0.5
HDAC4-204ENST00000446876 TSPAN9O75954 239 aa11.92□□□□□ -0.5
HDAC4-204ENST00000446876 HBZP02008 142 aa11.92□□□□□ -0.5
HDAC4-204ENST00000446876 RAB3BP20337 219 aa11.92□□□□□ -0.5
HDAC4-204ENST00000446876 GALP22466 123 aa11.92□□□□□ -0.5
HDAC4-204ENST00000446876 VEGFCP49767 419 aa11.92□□□□□ -0.5
HDAC4-204ENST00000446876 DYNLT3P51808 116 aa11.92□□□□□ -0.5
HDAC4-204ENST00000446876 LOXL3P58215 753 aa11.92□□□□□ -0.5
HDAC4-204ENST00000446876 C6orf183Q5T699 404 aa11.92□□□□□ -0.5
HDAC4-204ENST00000446876 OR10V1Q8NGI7 309 aa11.92□□□□□ -0.5
HDAC4-204ENST00000446876 HDHD3Q9BSH5 251 aaPredicted RBP11.92□□□□□ -0.5
HDAC4-204ENST00000446876 URM1Q9BTM9 101 aaKnown RBP11.92□□□□□ -0.5
HDAC4-204ENST00000446876 RNF167Q9H6Y7 350 aa11.92□□□□□ -0.5
HDAC4-204ENST00000446876 TAF9BQ9HBM6 251 aa11.92□□□□□ -0.5
HDAC4-204ENST00000446876 GFOD1Q9NXC2 390 aa11.92□□□□□ -0.5
HDAC4-204ENST00000446876 A0A1B0GUS0 222 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 IFITM5A6NNB3 132 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 FOXI3A8MTJ6 420 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-204ENST00000446876 SLC31A2O15432 143 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 SPINT2O43291 252 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 CA11O75493 328 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 SLC2A2P11168 524 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-204ENST00000446876 GADD45AP24522 165 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 FGF9P31371 208 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-204ENST00000446876 CEACAM3P40198 252 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 PSMD7P51665 324 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 EFNB2P52799 333 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 GNMTQ14749 295 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 SHISA2Q6UWI4 295 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 OR4C13Q8NGP0 309 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 TOMM40LQ969M1 308 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 RPEQ96AT9 228 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 CHCHD6Q9BRQ6 235 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 C16orf95Q9H693 158 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 RAB18Q9NP72 206 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 MBNL3Q9NUK0 354 aaKnown RBP11.91□□□□□ -0.5
HDAC4-204ENST00000446876 PLEKHJ1Q9NW61 149 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 AK3Q9UIJ7 227 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 SSR3Q9UNL2 185 aa11.91□□□□□ -0.5
HDAC4-204ENST00000446876 AMMECR1Q9Y4X0 333 aaPredicted RBP11.91□□□□□ -0.5
HDAC4-204ENST00000446876 LOC100506127A0A0U1RQW1 187 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 H3BUI4 141 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 TMEM50BP56557 158 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 PROK1P58294 105 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 HABP2Q14520 560 aaPredicted RBP11.9□□□□□ -0.5
HDAC4-204ENST00000446876 LIAT1Q6ZQX7 453 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 FAM89BQ8N5H3 189 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 TSPAN14Q8NG11 270 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 OR52L2PQ8NGH6 319 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 OR52M1Q8NGK5 317 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 OR10X1Q8NGY0 326 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 SETD6Q8TBK2 473 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 CREB3L1Q96BA8 519 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 ARHGAP5-AS1Q96IT6 56 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 NPFFR1Q9GZQ6 430 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 LIN7BQ9HAP6 207 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 CHMP1AQ9HD42 196 aaPredicted RBP11.9□□□□□ -0.5
HDAC4-204ENST00000446876 GNG12Q9UBI6 72 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 FBLN5Q9UBX5 448 aa11.9□□□□□ -0.5
HDAC4-204ENST00000446876 A0A1W2PPI3 338 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 TIMM23O14925 209 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 RRP9O43818 475 aaKnown RBP11.89□□□□□ -0.51
HDAC4-204ENST00000446876 TNFAIP8O95379 198 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 NAPSAO96009 420 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 CLEC2LP0C7M8 214 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 CD36P16671 472 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 REG1BP48304 166 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 MADCAM1Q13477 382 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 MOGAT2Q3SYC2 334 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 PLAC9Q5JTB6 97 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 TRAT1Q6PIZ9 186 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 SLC16A12Q6ZSM3 486 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 ZNF439Q8NDP4 499 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 PECRQ9BY49 303 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 ZNF702PQ9H963 129 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 KCNIP1Q9NZI2 227 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 PITPNC1Q9UKF7 332 aa11.89□□□□□ -0.51
HDAC4-204ENST00000446876 HSD17B6O14756 317 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 BRS3P32247 399 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 SDC2P34741 201 aa11.88□□□□□ -0.51
HDAC4-204ENST00000446876 PPP1CCP36873 323 aaKnown RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms