RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 OR3A1P47881 315 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 BEX5Q5H9J7 111 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 WFDC8Q8IUA0 241 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 ABHD14BQ96IU4 210 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 LURAP1Q96LR2 239 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 CITED4Q96RK1 184 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 MED9Q9NWA0 146 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 OR1A1Q9P1Q5 309 aa13.18□□□□□ -0.3
SNX13-204ENST00000444712 RBM7Q9Y580 266 aaKnown RBP13.18□□□□□ -0.3
SNX13-204ENST00000444712 LEUTXA8MZ59 168 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 E5RGE8 158 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 SPRY3O43610 288 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 PGLYRP1O75594 196 aaPredicted RBP13.17□□□□□ -0.3
SNX13-204ENST00000444712 F2RP25116 425 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 IL2RGP31785 369 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 PRDX2P32119 198 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 GABRA2P47869 451 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 KRBOX4Q5JUW0 171 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 C5orf24Q7Z6I8 188 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 PRR18Q8N4B5 295 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 RBPMSQ93062 196 aaKnown RBP13.17□□□□□ -0.3
SNX13-204ENST00000444712 SHARPINQ9H0F6 387 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 NSG2Q9Y328 171 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 RNF212BA8MTL3 300 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 RRASP10301 218 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 TNFAIP6P98066 277 aaPredicted RBP13.17□□□□□ -0.3
SNX13-204ENST00000444712 COMMD7Q86VX2 200 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 PDZD9Q8IXQ8 264 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 SELENOHQ8IZQ5 122 aaKnown RBP13.17□□□□□ -0.3
SNX13-204ENST00000444712 ZBTB34Q8NCN2 500 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 LHFPL5Q8TAF8 219 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 ITLN1Q8WWA0 313 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 NINJ1Q92982 152 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 SNX22Q96L94 193 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 TOLLIPQ9H0E2 274 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 ZC4H2Q9NQZ6 224 aa13.17□□□□□ -0.3
SNX13-204ENST00000444712 LSM5Q9Y4Y9 91 aaKnown RBP13.17□□□□□ -0.3
SNX13-204ENST00000444712 ANKRD11Q6UB99 2663 aaPredicted RBP13.16□□□□□ -0.3
SNX13-204ENST00000444712 K7EPK0 472 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 ABCD4O14678 606 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 ST8SIA3O43173 380 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 SCGB1D2O95969 90 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 PSG2P11465 335 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 VDAC1P21796 283 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 CEACAM6P40199 344 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 ASCL1P50553 236 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 AESQ08117 197 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 TESK1Q15569 626 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 MSMO1Q15800 293 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 THOC7Q6I9Y2 204 aaKnown RBP13.16□□□□□ -0.3
SNX13-204ENST00000444712 MOGAT3Q86VF5 341 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 FAM71E2Q8N5Q1 922 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 GCSAMQ8N6F7 178 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 ST6GALNAC3Q8NDV1 305 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 LRRC20Q8TCA0 184 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 FAM216AQ8WUB2 273 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 RRNAD1Q96FB5 475 aaKnown RBP13.16□□□□□ -0.3
SNX13-204ENST00000444712 COQ2Q96H96 371 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 LIN7CQ9NUP9 197 aaKnown RBP13.16□□□□□ -0.3
SNX13-204ENST00000444712 PTPRQQ9UMZ3 2332 aa13.16□□□□□ -0.3
SNX13-204ENST00000444712 TRGV8A0A0C4DH27 118 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 MGST3O14880 152 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 LHBP01229 141 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 NMBP08949 121 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 C22orf34Q6ZV56 151 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 FOXRED2Q8IWF2 684 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 CD177Q8N6Q3 437 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 RNF7Q9UBF6 113 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 PFDN2Q9UHV9 154 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 TRAV39A0A0B4J263 110 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 CLEC18AA5D8T8 446 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 C12orf77C9JDV5 145 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 IGHV1-46P01743 117 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 MBPP02686 304 aaPredicted RBP13.15□□□□□ -0.3
SNX13-204ENST00000444712 ADH4P08319 380 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 EGR1P18146 543 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 RPL12P30050 165 aaKnown RBP13.15□□□□□ -0.3
SNX13-204ENST00000444712 CA7P43166 264 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 SNTB1Q13884 538 aaKnown RBP13.15□□□□□ -0.3
SNX13-204ENST00000444712 CLEC18CQ8NCF0 446 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 OR4D5Q8NGN0 318 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 Q8TCH9 128 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 NCOR1P1Q9H4R4 102 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 RAB9BQ9NP90 201 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 KCNS2Q9ULS6 477 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 POMT1Q9Y6A1 747 aa13.15□□□□□ -0.3
SNX13-204ENST00000444712 ASPMQ8IZT6 3477 aa13.14□□□□□ -0.31
SNX13-204ENST00000444712 DPRXA6NFQ7 191 aa13.14□□□□□ -0.31
SNX13-204ENST00000444712 SPINT2O43291 252 aa13.14□□□□□ -0.31
SNX13-204ENST00000444712 ZNF737O75373 536 aa13.14□□□□□ -0.31
SNX13-204ENST00000444712 HBZP02008 142 aa13.14□□□□□ -0.31
SNX13-204ENST00000444712 SERPINE2P07093 398 aa13.14□□□□□ -0.31
SNX13-204ENST00000444712 THBDP07204 575 aa13.14□□□□□ -0.31
SNX13-204ENST00000444712 HKR1P10072 659 aa13.14□□□□□ -0.31
SNX13-204ENST00000444712 TNFRSF1AP19438 455 aa13.14□□□□□ -0.31
SNX13-204ENST00000444712 BSPH1Q075Z2 132 aa13.14□□□□□ -0.31
SNX13-204ENST00000444712 GNMTQ14749 295 aa13.14□□□□□ -0.31
SNX13-204ENST00000444712 GPR157Q5UAW9 335 aa13.14□□□□□ -0.31
SNX13-204ENST00000444712 BAP18Q8IXM2 172 aa13.14□□□□□ -0.31
SNX13-204ENST00000444712 PLEKHF2Q9H8W4 249 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms