RNA–Protein interactions for RNA: ENST00000443780.5

UBE2D4-205, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 3

Gene UBE2D4, Length 743 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-205ENST00000443780 LYG1Q8N1E2 194 aa16.27■□□□□ 0.2
UBE2D4-205ENST00000443780 OR4K15Q8NH41 348 aa16.27■□□□□ 0.2
UBE2D4-205ENST00000443780 UFD1Q92890 307 aa16.27■□□□□ 0.2
UBE2D4-205ENST00000443780 CST11Q9H112 138 aa16.27■□□□□ 0.2
UBE2D4-205ENST00000443780 TRAPPC2LQ9UL33 140 aa16.27■□□□□ 0.2
UBE2D4-205ENST00000443780 IGHV3-43A0A0B4J1X8 118 aa16.26■□□□□ 0.19
UBE2D4-205ENST00000443780 C12orf77C9JDV5 145 aa16.26■□□□□ 0.19
UBE2D4-205ENST00000443780 M0QZK8 103 aa16.26■□□□□ 0.19
UBE2D4-205ENST00000443780 SNRNP70P08621 437 aaKnown RBP16.26■□□□□ 0.19
UBE2D4-205ENST00000443780 UCHL1P09936 223 aa16.26■□□□□ 0.19
UBE2D4-205ENST00000443780 UBBP0CG47 229 aa16.26■□□□□ 0.19
UBE2D4-205ENST00000443780 IGHV3-43DP0DP04 118 aa16.26■□□□□ 0.19
UBE2D4-205ENST00000443780 CRHBPP24387 322 aa16.26■□□□□ 0.19
UBE2D4-205ENST00000443780 TPBGQ13641 420 aa16.26■□□□□ 0.19
UBE2D4-205ENST00000443780 HSD17B12Q53GQ0 312 aa16.26■□□□□ 0.19
UBE2D4-205ENST00000443780 FAM53AQ6NSI3 398 aaPredicted RBP16.26■□□□□ 0.19
UBE2D4-205ENST00000443780 IZUMO2Q6UXV1 221 aa16.26■□□□□ 0.19
UBE2D4-205ENST00000443780 LINC00311Q8N616 119 aa16.26■□□□□ 0.19
UBE2D4-205ENST00000443780 C8orf31Q8N9H6 132 aa16.26■□□□□ 0.19
UBE2D4-205ENST00000443780 TMEM203Q969S6 136 aa16.26■□□□□ 0.19
UBE2D4-205ENST00000443780 CITED2Q99967 270 aaPredicted RBP16.26■□□□□ 0.19
UBE2D4-205ENST00000443780 UBE2QL1A1L167 161 aa16.25■□□□□ 0.19
UBE2D4-205ENST00000443780 SPINT2O43291 252 aa16.25■□□□□ 0.19
UBE2D4-205ENST00000443780 PDCD6O75340 191 aa16.25■□□□□ 0.19
UBE2D4-205ENST00000443780 MPIG6BO95866 241 aa16.25■□□□□ 0.19
UBE2D4-205ENST00000443780 LPLP06858 475 aa16.25■□□□□ 0.19
UBE2D4-205ENST00000443780 HSMCR30P0CW71 290 aa16.25■□□□□ 0.19
UBE2D4-205ENST00000443780 CD37P11049 281 aa16.25■□□□□ 0.19
UBE2D4-205ENST00000443780 EMX1Q04741 257 aaPredicted RBP16.25■□□□□ 0.19
UBE2D4-205ENST00000443780 ZNF816Q0VGE8 651 aaPredicted RBP16.25■□□□□ 0.19
UBE2D4-205ENST00000443780 NSUN5P1Q3KNT7 163 aa16.25■□□□□ 0.19
UBE2D4-205ENST00000443780 C6orf183Q5T699 404 aa16.25■□□□□ 0.19
UBE2D4-205ENST00000443780 PRSS48Q7RTY5 328 aa16.25■□□□□ 0.19
UBE2D4-205ENST00000443780 CYYR1Q96J86 154 aa16.25■□□□□ 0.19
UBE2D4-205ENST00000443780 CCDC90BQ9GZT6 254 aa16.25■□□□□ 0.19
UBE2D4-205ENST00000443780 RAB9BQ9NP90 201 aa16.25■□□□□ 0.19
UBE2D4-205ENST00000443780 ISYNA1Q9NPH2 558 aa16.25■□□□□ 0.19
UBE2D4-205ENST00000443780 SH2D7A6NKC9 451 aaPredicted RBP16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 HSD17B6O14756 317 aa16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 OPN1MWP04001 364 aa16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 GAPDHP04406 335 aaKnown RBP16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 OPN1MW2P0DN77 364 aa16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 OPN1MW3P0DN78 364 aa16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 VSIG8P0DPA2 414 aa16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 RCC1P18754 421 aaPredicted RBP16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 HSPA13P48723 471 aa16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 HES1Q14469 280 aa16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 Q3ZCU0 254 aa16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 OR10K2Q6IF99 312 aa16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 TRAT1Q6PIZ9 186 aa16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 TMEM91Q6ZNR0 172 aa16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 NDUFA11Q86Y39 141 aa16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 OR5AU1Q8NGC0 362 aa16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 MOB4Q9Y3A3 225 aa16.24■□□□□ 0.19
UBE2D4-205ENST00000443780 IGHV1-3A0A0C4DH29 117 aa16.23■□□□□ 0.19
UBE2D4-205ENST00000443780 ADARB2-AS1A8MUL3 147 aa16.23■□□□□ 0.19
UBE2D4-205ENST00000443780 CCRL2O00421 344 aa16.23■□□□□ 0.19
UBE2D4-205ENST00000443780 HBZP02008 142 aa16.23■□□□□ 0.19
UBE2D4-205ENST00000443780 HTR2CP28335 458 aa16.23■□□□□ 0.19
UBE2D4-205ENST00000443780 RPS25P62851 125 aaKnown RBP16.23■□□□□ 0.19
UBE2D4-205ENST00000443780 MLLT11Q13015 90 aaPredicted RBP16.23■□□□□ 0.19
UBE2D4-205ENST00000443780 TRAM1Q15629 374 aa16.23■□□□□ 0.19
UBE2D4-205ENST00000443780 TMEM30BQ3MIR4 351 aa16.23■□□□□ 0.19
UBE2D4-205ENST00000443780 CENPVQ7Z7K6 275 aaPredicted RBP16.23■□□□□ 0.19
UBE2D4-205ENST00000443780 OR1L1Q8NH94 360 aa16.23■□□□□ 0.19
UBE2D4-205ENST00000443780 KCNG3Q8TAE7 436 aa16.23■□□□□ 0.19
UBE2D4-205ENST00000443780 GNG12Q9UBI6 72 aa16.23■□□□□ 0.19
UBE2D4-205ENST00000443780 SLC22A1O15245 554 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 IGKV1D-33P01593 117 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 IGKV1-33P01594 117 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 CPEP16870 476 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 TMEM11P17152 192 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 IL3RAP26951 378 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 MAP2K4P45985 399 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 REG1BP48304 166 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 RPS27AP62979 156 aaKnown RBP16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 CD83Q01151 205 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 HNF4GQ14541 408 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 PDLIM3Q53GG5 364 aaPredicted RBP16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 C9orf152Q5JTZ5 239 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 NKAPLQ5M9Q1 402 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 MOB3BQ86TA1 216 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 PRR18Q8N4B5 295 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 ZNF439Q8NDP4 499 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 MRPL30Q8TCC3 161 aaKnown RBP16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 ST6GALNAC6Q969X2 333 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 CNBD2Q96M20 576 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 TMEM59Q9BXS4 323 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 KCNK15Q9H427 330 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 TAF9BQ9HBM6 251 aa16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 MBNL3Q9NUK0 354 aaKnown RBP16.22■□□□□ 0.19
UBE2D4-205ENST00000443780 SLC31A2O15432 143 aa16.21■□□□□ 0.19
UBE2D4-205ENST00000443780 PSMA1P25786 263 aaKnown RBP16.21■□□□□ 0.19
UBE2D4-205ENST00000443780 CHATP28329 748 aa16.21■□□□□ 0.19
UBE2D4-205ENST00000443780 QRFPP83859 136 aa16.21■□□□□ 0.19
UBE2D4-205ENST00000443780 UNC119Q13432 240 aa16.21■□□□□ 0.19
UBE2D4-205ENST00000443780 EBI3Q14213 229 aa16.21■□□□□ 0.19
UBE2D4-205ENST00000443780 SLC25A48Q6ZT89 311 aaKnown RBP16.21■□□□□ 0.19
UBE2D4-205ENST00000443780 ZNF554Q86TJ5 538 aa16.21■□□□□ 0.19
UBE2D4-205ENST00000443780 C1QL4Q86Z23 238 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms