RNA–Protein interactions for RNA: ENST00000442625.2

MCF2L-218, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-218ENST00000442625 PF4V1P10720 104 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 LIFP15018 202 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 ZNF32P17041 273 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 HLA-DRB3P79483 266 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 ZNF92Q03936 586 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 EIF3IQ13347 325 aaKnown RBP12.11□□□□□ -0.47
MCF2L-218ENST00000442625 FAM27BQ5VT28 67 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 TMEM108Q6UXF1 575 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 FOXL2NBQ6ZUU3 175 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 SLC25A26Q70HW3 274 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 ATG101Q9BSB4 218 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 BCO1Q9HAY6 547 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 CCL28Q9NRJ3 127 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 A0A1W2PR80 420 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 PHOX2AO14813 284 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 VAMP5O95183 116 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 CEACAM6P40199 344 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 MALLQ13021 153 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 CNN3Q15417 329 aaKnown RBP12.11□□□□□ -0.47
MCF2L-218ENST00000442625 ZNF506Q5JVG8 444 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 PLCXD3Q63HM9 321 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 YRDCQ86U90 279 aaKnown RBP12.11□□□□□ -0.47
MCF2L-218ENST00000442625 IL22RA1Q8N6P7 574 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 OR1F12Q8NHA8 337 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 PACRGQ96M98 296 aaPredicted RBP12.11□□□□□ -0.47
MCF2L-218ENST00000442625 SIGLEC12Q96PQ1 595 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 TMEM208Q9BTX3 173 aa12.11□□□□□ -0.47
MCF2L-218ENST00000442625 TSTD3H0UI37 97 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 M0QZK8 103 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 IGHV3-9P01782 118 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 CCDC71LQ8N9Z2 235 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 PLPPR1Q8TBJ4 325 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 HIST1H2BLQ99880 126 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 PLSCR4Q9NRQ2 329 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 FAM186AA6NE01 2351 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 LY6G6EA0A0G2JKS1 128 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 A0A0G2JMM0 328 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 A0A1W2PPB8 328 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 A0A1W2PRS3 328 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 KIR3DP1A8MWS1 328 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 HMGB3O15347 200 aaKnown RBP12.1□□□□□ -0.47
MCF2L-218ENST00000442625 PDCD6O75340 191 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 HSPB1P04792 205 aaKnown RBP12.1□□□□□ -0.47
MCF2L-218ENST00000442625 TCN2P20062 427 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 PAX9P55771 341 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 MRPS34P82930 218 aaKnown RBP12.1□□□□□ -0.47
MCF2L-218ENST00000442625 ESPL1Q14674 2120 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 RAB35Q15286 201 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 DMRTA1Q5VZB9 504 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 FAM90A2PQ658T7 463 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 Q6ZSR3 168 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 C10orf35Q96D05 121 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 SLC25A31Q9H0C2 315 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 CRIM1Q9NZV1 1036 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 U3KQA8 63 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 COL6A3P12111 3177 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 A0A087WWC5 75 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 IFNL4K9M1U5 179 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 TUBG1P23258 451 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 IL2RGP31785 369 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 SP5Q6BEB4 398 aaPredicted RBP12.1□□□□□ -0.47
MCF2L-218ENST00000442625 MRPL14Q6P1L8 145 aaKnown RBP12.1□□□□□ -0.47
MCF2L-218ENST00000442625 SLC23A3Q6PIS1 610 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 DNASE2BQ8WZ79 361 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 TUBG2Q9NRH3 451 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 RPRMQ9NS64 109 aa12.1□□□□□ -0.47
MCF2L-218ENST00000442625 CDS2O95674 445 aa12.09□□□□□ -0.47
MCF2L-218ENST00000442625 DSCR4P56555 118 aaPredicted RBP12.09□□□□□ -0.47
MCF2L-218ENST00000442625 PKIAP61925 76 aa12.09□□□□□ -0.47
MCF2L-218ENST00000442625 PSG4Q00888 419 aa12.09□□□□□ -0.47
MCF2L-218ENST00000442625 ZFP36L1Q07352 338 aaKnown RBP12.09□□□□□ -0.47
MCF2L-218ENST00000442625 HERPUD1Q15011 391 aa12.09□□□□□ -0.47
MCF2L-218ENST00000442625 TRIM61Q5EBN2 209 aa12.09□□□□□ -0.47
MCF2L-218ENST00000442625 OR51H1Q8NH63 302 aa12.09□□□□□ -0.47
MCF2L-218ENST00000442625 PTRH2Q9Y3E5 179 aaKnown RBP12.09□□□□□ -0.47
MCF2L-218ENST00000442625 URB1O60287 2271 aaKnown RBP12.09□□□□□ -0.47
MCF2L-218ENST00000442625 IAPPP10997 89 aa12.09□□□□□ -0.47
MCF2L-218ENST00000442625 FKBP2P26885 142 aaKnown RBP12.09□□□□□ -0.47
MCF2L-218ENST00000442625 APLNRP35414 380 aa12.09□□□□□ -0.47
MCF2L-218ENST00000442625 RBM11P57052 281 aaKnown RBP12.09□□□□□ -0.47
MCF2L-218ENST00000442625 ZNF726P1Q15940 193 aa12.09□□□□□ -0.47
MCF2L-218ENST00000442625 LHFPL2Q6ZUX7 228 aa12.09□□□□□ -0.47
MCF2L-218ENST00000442625 ZNF611Q8N823 705 aa12.09□□□□□ -0.47
MCF2L-218ENST00000442625 EXTL1Q92935 676 aa12.09□□□□□ -0.47
MCF2L-218ENST00000442625 DOCK7Q96N67 2140 aa12.09□□□□□ -0.47
MCF2L-218ENST00000442625 PCED1AQ9H1Q7 454 aa12.09□□□□□ -0.47
MCF2L-218ENST00000442625 TAAR3PQ9P1P4 343 aa12.09□□□□□ -0.47
MCF2L-218ENST00000442625 FREM1Q5H8C1 2179 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 IGHV1-45A0A0A0MS14 117 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 LOC102723971A0A1B0GUV8 181 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 ZNF732B4DXR9 585 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 B9A039 149 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 RPL36A-HNRNPH2H7BZ11 118 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 UMODP07911 640 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 CCL2P13500 99 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 IGFBP7Q16270 282 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 GPR137CQ8N3F9 429 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 AGBL5Q8NDL9 886 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 UBALD1Q8TB05 177 aa12.08□□□□□ -0.48
MCF2L-218ENST00000442625 TMEM38BQ9NVV0 291 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms