RNA–Protein interactions for RNA: ENST00000441099.5

TRAPPC12-209, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 698 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-209ENST00000441099 PDCD5O14737 125 aa12.81□□□□□ -0.36
TRAPPC12-209ENST00000441099 FGF9P31371 208 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC12-209ENST00000441099 LOXL3P58215 753 aa12.81□□□□□ -0.36
TRAPPC12-209ENST00000441099 C2orf76Q3KRA6 126 aa12.81□□□□□ -0.36
TRAPPC12-209ENST00000441099 FAM53AQ6NSI3 398 aaPredicted RBP12.81□□□□□ -0.36
TRAPPC12-209ENST00000441099 C6orf201Q7Z4U5 140 aa12.81□□□□□ -0.36
TRAPPC12-209ENST00000441099 WFDC12Q8WWY7 111 aa12.81□□□□□ -0.36
TRAPPC12-209ENST00000441099 FAAP24Q9BTP7 215 aa12.81□□□□□ -0.36
TRAPPC12-209ENST00000441099 TXNL4BQ9NX01 149 aaKnown RBP12.81□□□□□ -0.36
TRAPPC12-209ENST00000441099 GFOD1Q9NXC2 390 aa12.81□□□□□ -0.36
TRAPPC12-209ENST00000441099 STUB1Q9UNE7 303 aa12.81□□□□□ -0.36
TRAPPC12-209ENST00000441099 RNF114Q9Y508 228 aa12.81□□□□□ -0.36
TRAPPC12-209ENST00000441099 FBN3Q75N90 2809 aa12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 IFITM5A6NNB3 132 aa12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 SDCBPO00560 298 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 SOCS1O15524 211 aa12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 HBZP02008 142 aa12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 MYL9P24844 172 aa12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 BLVRBP30043 206 aaPredicted RBP12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 CEACAM3P40198 252 aa12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 GNG10P50151 68 aa12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 PROK1P58294 105 aa12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 KRTAP10-3P60369 221 aa12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 PLA2G7Q13093 441 aa12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 C6orf183Q5T699 404 aa12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 HES5Q5TA89 166 aa12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 NR2C2APQ86WQ0 139 aa12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 TMEM219Q86XT9 240 aa12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 URM1Q9BTM9 101 aaKnown RBP12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 PITPNC1Q9UKF7 332 aa12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 TRRAPQ9Y4A5 3859 aa12.8□□□□□ -0.36
TRAPPC12-209ENST00000441099 IGHV3-43A0A0B4J1X8 118 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 A0A1W2PPE3 182 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 OOSP1A8MZH6 123 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 SPINT2O43291 252 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 IGHV3-43DP0DP04 118 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 RAB3BP20337 219 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 RANBP1P43487 201 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 KIR2DS4P43632 304 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 TMEM50BP56557 158 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 SRSF4Q08170 494 aaKnown RBP12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 NEDD8Q15843 81 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 FBLN7Q53RD9 439 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 TRAT1Q6PIZ9 186 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 C5orf24Q7Z6I8 188 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 ZNF554Q86TJ5 538 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 C8orf31Q8N9H6 132 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 OR1L1Q8NH94 360 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 OR51E2Q9H255 320 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 RANBP3Q9H6Z4 567 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 TAF9BQ9HBM6 251 aa12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 AMMECR1Q9Y4X0 333 aaPredicted RBP12.79□□□□□ -0.36
TRAPPC12-209ENST00000441099 TMEM272A0A1B0GTI8 110 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 NAPSAO96009 420 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 CD24P25063 80 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 BRS3P32247 399 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 MADCAM1Q13477 382 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 DIAPH2-AS1Q14236 149 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 TMEM30BQ3MIR4 351 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 Q3ZCU0 254 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 CCDC144NLQ6NUI1 221 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 Q6ZPA2 131 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 LINC00311Q8N616 119 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 OR4C13Q8NGP0 309 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 NPFFR1Q9GZQ6 430 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 RAB9BQ9NP90 201 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 PLEKHJ1Q9NW61 149 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 RAB22AQ9UL26 194 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 HSF4Q9ULV5 492 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 SSR3Q9UNL2 185 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 SIGLEC9Q9Y336 463 aa12.78□□□□□ -0.36
TRAPPC12-209ENST00000441099 VEGFCP49767 419 aa12.77□□□□□ -0.37
TRAPPC12-209ENST00000441099 EFNB2P52799 333 aa12.77□□□□□ -0.37
TRAPPC12-209ENST00000441099 ZNF880Q6PDB4 577 aa12.77□□□□□ -0.37
TRAPPC12-209ENST00000441099 PRR18Q8N4B5 295 aa12.77□□□□□ -0.37
TRAPPC12-209ENST00000441099 ZNF439Q8NDP4 499 aa12.77□□□□□ -0.37
TRAPPC12-209ENST00000441099 OR10X1Q8NGY0 326 aa12.77□□□□□ -0.37
TRAPPC12-209ENST00000441099 SGMS2Q8NHU3 365 aa12.77□□□□□ -0.37
TRAPPC12-209ENST00000441099 TOMM40LQ969M1 308 aa12.77□□□□□ -0.37
TRAPPC12-209ENST00000441099 RPEQ96AT9 228 aa12.77□□□□□ -0.37
TRAPPC12-209ENST00000441099 OCSTAMPQ9BR26 566 aa12.77□□□□□ -0.37
TRAPPC12-209ENST00000441099 ZNF702PQ9H963 129 aa12.77□□□□□ -0.37
TRAPPC12-209ENST00000441099 KCNIP1Q9NZI2 227 aa12.77□□□□□ -0.37
TRAPPC12-209ENST00000441099 AK3Q9UIJ7 227 aa12.77□□□□□ -0.37
TRAPPC12-209ENST00000441099 A0A087WXM4 84 aa12.76□□□□□ -0.37
TRAPPC12-209ENST00000441099 A0A0B4J203 849 aa12.76□□□□□ -0.37
TRAPPC12-209ENST00000441099 A0A1W2PPI3 338 aa12.76□□□□□ -0.37
TRAPPC12-209ENST00000441099 SMIM30A4D0T7 59 aa12.76□□□□□ -0.37
TRAPPC12-209ENST00000441099 FAM90A9PA6NNJ1 464 aa12.76□□□□□ -0.37
TRAPPC12-209ENST00000441099 SLC31A2O15432 143 aa12.76□□□□□ -0.37
TRAPPC12-209ENST00000441099 TNFAIP8O95379 198 aa12.76□□□□□ -0.37
TRAPPC12-209ENST00000441099 CD36P16671 472 aa12.76□□□□□ -0.37
TRAPPC12-209ENST00000441099 GADD45AP24522 165 aa12.76□□□□□ -0.37
TRAPPC12-209ENST00000441099 MNDAP41218 407 aa12.76□□□□□ -0.37
TRAPPC12-209ENST00000441099 RAB7AP51149 207 aa12.76□□□□□ -0.37
TRAPPC12-209ENST00000441099 ARHGDIBP52566 201 aa12.76□□□□□ -0.37
TRAPPC12-209ENST00000441099 ZNF134P52741 427 aa12.76□□□□□ -0.37
TRAPPC12-209ENST00000441099 PLAC9Q5JTB6 97 aa12.76□□□□□ -0.37
TRAPPC12-209ENST00000441099 SLC25A48Q6ZT89 311 aaKnown RBP12.76□□□□□ -0.37
TRAPPC12-209ENST00000441099 Q8N2B8 174 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms