RNA–Protein interactions for RNA: ENST00000439235.5

CHD3-204, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 5

Gene CHD3, Length 1,263 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-204ENST00000439235 LCN2P80188 198 aa17.07■□□□□ 0.32
CHD3-204ENST00000439235 C17orf58Q2M2W7 97 aa17.07■□□□□ 0.32
CHD3-204ENST00000439235 OR1L1Q8NH94 360 aa17.07■□□□□ 0.32
CHD3-204ENST00000439235 IL1F10Q8WWZ1 152 aa17.07■□□□□ 0.32
CHD3-204ENST00000439235 KIRREL1Q96J84 757 aa17.07■□□□□ 0.32
CHD3-204ENST00000439235 REG4Q9BYZ8 158 aa17.07■□□□□ 0.32
CHD3-204ENST00000439235 POLR3KQ9Y2Y1 108 aaPredicted RBP17.07■□□□□ 0.32
CHD3-204ENST00000439235 DISC1C4P0D8 188 aa17.06■□□□□ 0.32
CHD3-204ENST00000439235 FAM157AC9JC47 383 aa17.06■□□□□ 0.32
CHD3-204ENST00000439235 NPIPB11E5RHQ5 1161 aa17.06■□□□□ 0.32
CHD3-204ENST00000439235 LYRM1O43325 122 aa17.06■□□□□ 0.32
CHD3-204ENST00000439235 CCL3L1P16619 93 aa17.06■□□□□ 0.32
CHD3-204ENST00000439235 ZFP36P26651 326 aaKnown RBP17.06■□□□□ 0.32
CHD3-204ENST00000439235 IGSF11Q5DX21 431 aa17.06■□□□□ 0.32
CHD3-204ENST00000439235 MZT2BQ6NZ67 158 aa17.06■□□□□ 0.32
CHD3-204ENST00000439235 OVCH2Q7RTZ1 564 aa17.06■□□□□ 0.32
CHD3-204ENST00000439235 TMEM17Q86X19 198 aa17.06■□□□□ 0.32
CHD3-204ENST00000439235 ARRDC1Q8N5I2 433 aa17.06■□□□□ 0.32
CHD3-204ENST00000439235 OR10A7Q8NGE5 316 aa17.06■□□□□ 0.32
CHD3-204ENST00000439235 TINAGL1Q9GZM7 467 aaPredicted RBP17.06■□□□□ 0.32
CHD3-204ENST00000439235 LINC00574Q9H8X3 128 aa17.06■□□□□ 0.32
CHD3-204ENST00000439235 MCUBQ9NWR8 336 aa17.06■□□□□ 0.32
CHD3-204ENST00000439235 TBC1D24Q9ULP9 559 aa17.06■□□□□ 0.32
CHD3-204ENST00000439235 CELSR2Q9HCU4 2923 aa17.06■□□□□ 0.32
CHD3-204ENST00000439235 SPG11Q96JI7 2443 aa17.06■□□□□ 0.32
CHD3-204ENST00000439235 IGHV2-70DA0A0C4DH43 119 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 hCG_1809904A0A1W2PP81 198 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 A0A1W2PPE2 198 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 A0A1W2PR64 198 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 A0A1W2PRV1 198 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 RNF223E7ERA6 249 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 F2RL2O00254 374 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 BET1O15155 118 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 PLA2G10O15496 165 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 RBP4P02753 201 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 AMY2AP04746 511 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 OR5H8P0DN80 308 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 FPR2P25090 351 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 RFX2P48378 723 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 HTD2P86397 168 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 HERPUD1Q15011 391 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 POC5Q8NA72 575 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 OR10J5Q8NHC4 309 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 RFESDQ8TAC1 157 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 UBALD1Q8TB05 177 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 GINS4Q9BRT9 223 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 IDI2-AS1Q9NZ38 188 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 JPT1Q9UK76 154 aa17.05■□□□□ 0.32
CHD3-204ENST00000439235 TRBV6-7A0A0A0MS04 114 aa17.04■□□□□ 0.32
CHD3-204ENST00000439235 IGKV1-6A0A0C4DH72 117 aa17.04■□□□□ 0.32
CHD3-204ENST00000439235 SDCBPO00560 298 aaPredicted RBP17.04■□□□□ 0.32
CHD3-204ENST00000439235 HSPA12AO43301 675 aa17.04■□□□□ 0.32
CHD3-204ENST00000439235 ZBTB25P24278 435 aa17.04■□□□□ 0.32
CHD3-204ENST00000439235 TSPAN5P62079 268 aa17.04■□□□□ 0.32
CHD3-204ENST00000439235 FAAP20Q6NZ36 180 aa17.04■□□□□ 0.32
CHD3-204ENST00000439235 HEPN1Q6WQI6 88 aa17.04■□□□□ 0.32
CHD3-204ENST00000439235 ZNF782Q6ZMW2 699 aaPredicted RBP17.04■□□□□ 0.32
CHD3-204ENST00000439235 KIR3DL3Q8N743 410 aa17.04■□□□□ 0.32
CHD3-204ENST00000439235 OR4D10Q8NGI6 311 aa17.04■□□□□ 0.32
CHD3-204ENST00000439235 C1orf159Q96HA4 380 aa17.04■□□□□ 0.32
CHD3-204ENST00000439235 PRRT1Q99946 306 aa17.04■□□□□ 0.32
CHD3-204ENST00000439235 C11orf54Q9H0W9 315 aaPredicted RBP17.04■□□□□ 0.32
CHD3-204ENST00000439235 ONECUT1Q9UBC0 465 aa17.04■□□□□ 0.32
CHD3-204ENST00000439235 SLC23A1Q9UHI7 598 aa17.04■□□□□ 0.32
CHD3-204ENST00000439235 ARID1AO14497 2285 aa17.03■□□□□ 0.32
CHD3-204ENST00000439235 C17orf98A8MV24 154 aa17.03■□□□□ 0.32
CHD3-204ENST00000439235 M0R1W7 72 aa17.03■□□□□ 0.32
CHD3-204ENST00000439235 DLX6P56179 175 aa17.03■□□□□ 0.32
CHD3-204ENST00000439235 PRAMEF5Q5TYX0 476 aa17.03■□□□□ 0.32
CHD3-204ENST00000439235 BTNL3Q6UXE8 466 aa17.03■□□□□ 0.32
CHD3-204ENST00000439235 C5orf24Q7Z6I8 188 aa17.03■□□□□ 0.32
CHD3-204ENST00000439235 WFDC11Q8NEX6 87 aa17.03■□□□□ 0.32
CHD3-204ENST00000439235 OR52M1Q8NGK5 317 aa17.03■□□□□ 0.32
CHD3-204ENST00000439235 OR56B4Q8NH76 319 aa17.03■□□□□ 0.32
CHD3-204ENST00000439235 OR2S2Q9NQN1 319 aa17.03■□□□□ 0.32
CHD3-204ENST00000439235 SLC2A8Q9NY64 477 aa17.03■□□□□ 0.32
CHD3-204ENST00000439235 GNG12Q9UBI6 72 aa17.03■□□□□ 0.32
CHD3-204ENST00000439235 ZNF69Q9UC07 566 aa17.03■□□□□ 0.32
CHD3-204ENST00000439235 SCP2D1Q9UJQ7 156 aa17.03■□□□□ 0.32
CHD3-204ENST00000439235 B4DSR2 109 aa17.02■□□□□ 0.32
CHD3-204ENST00000439235 RGS11O94810 467 aa17.02■□□□□ 0.32
CHD3-204ENST00000439235 MSMBP08118 114 aa17.02■□□□□ 0.32
CHD3-204ENST00000439235 OMGP23515 440 aa17.02■□□□□ 0.32
CHD3-204ENST00000439235 PAX2Q02962 417 aa17.02■□□□□ 0.32
CHD3-204ENST00000439235 LTC4SQ16873 150 aa17.02■□□□□ 0.32
CHD3-204ENST00000439235 OR6F1Q8NGZ6 308 aa17.02■□□□□ 0.32
CHD3-204ENST00000439235 DACT3Q96B18 629 aaPredicted RBP17.02■□□□□ 0.32
CHD3-204ENST00000439235 SLC6A7Q99884 636 aa17.02■□□□□ 0.32
CHD3-204ENST00000439235 LPAR2Q9HBW0 351 aa17.02■□□□□ 0.32
CHD3-204ENST00000439235 OR1A1Q9P1Q5 309 aa17.02■□□□□ 0.32
CHD3-204ENST00000439235 APCP25054 2843 aa17.02■□□□□ 0.32
CHD3-204ENST00000439235 ABCA12Q86UK0 2595 aa17.02■□□□□ 0.31
CHD3-204ENST00000439235 ZNF735P0CB33 412 aa17.01■□□□□ 0.31
CHD3-204ENST00000439235 FCGR2CP31995 323 aa17.01■□□□□ 0.31
CHD3-204ENST00000439235 RGS21Q2M5E4 152 aa17.01■□□□□ 0.31
CHD3-204ENST00000439235 SCGB2B2Q4G0G5 96 aa17.01■□□□□ 0.31
CHD3-204ENST00000439235 H1FOOQ8IZA3 346 aaPredicted RBP17.01■□□□□ 0.31
CHD3-204ENST00000439235 LINC01356Q8N9X3 169 aa17.01■□□□□ 0.31
CHD3-204ENST00000439235 OR52L2PQ8NGH6 319 aa17.01■□□□□ 0.31
CHD3-204ENST00000439235 OR51S1Q8NGJ8 323 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms