RNA–Protein interactions for RNA: ENST00000439080.6

TARDBP-203, Transcript of TAR DNA binding protein, humanhuman

TSL 2

Gene TARDBP, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-203ENST00000439080 RAB9BQ9NP90 201 aa13.74□□□□□ -0.21
TARDBP-203ENST00000439080 ESM1Q9NQ30 184 aa13.74□□□□□ -0.21
TARDBP-203ENST00000439080 KCNIP1Q9NZI2 227 aa13.74□□□□□ -0.21
TARDBP-203ENST00000439080 TBL2Q9Y4P3 447 aaKnown RBP13.74□□□□□ -0.21
TARDBP-203ENST00000439080 TRBV6-6A0A0A6YYG2 114 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 A0A0A6YYJ9 748 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 DNAJC9-AS1A6NH13 148 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 SERPINE3A8MV23 424 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 F2RL2O00254 374 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 SDCBPO00560 298 aaPredicted RBP13.73□□□□□ -0.21
TARDBP-203ENST00000439080 SPINT2O43291 252 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 VENTXO95231 258 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 HBZP02008 142 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 RORCP51449 518 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 MRPS15P82914 257 aaKnown RBP13.73□□□□□ -0.21
TARDBP-203ENST00000439080 BAMBIQ13145 260 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 HMGN3Q15651 99 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 UBE2NLQ5JXB2 153 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 ZNF880Q6PDB4 577 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 LHFPL4Q7Z7J7 247 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 ZNF554Q86TJ5 538 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 OR4P4Q8NGL7 312 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 LEAP2Q969E1 77 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 ISOC1Q96CN7 298 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 JMJD8Q96S16 334 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 PRDM13Q9H4Q3 707 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 ZNRD1Q9P1U0 126 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 ATRQ13535 2644 aa13.73□□□□□ -0.21
TARDBP-203ENST00000439080 IGHV3-43A0A0B4J1X8 118 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 H3BMQ9 156 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 IGHV3-7P01780 117 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 MELTFP08582 738 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 CD3GP09693 182 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 IGHV3-43DP0DP04 118 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 GNG10P50151 68 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 TMEM30BQ3MIR4 351 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 LDLRAD2Q5SZI1 272 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 Q6YL49 198 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 LDLRAD3Q86YD5 345 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 SAMD12Q8N8I0 201 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 ZDHHC22Q8N966 263 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 ZNF596Q8TC21 504 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 PHF21AQ96BD5 680 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 AJUBAQ96IF1 538 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 DUX5Q96PT3 197 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.72□□□□□ -0.21
TARDBP-203ENST00000439080 GFOD1Q9NXC2 390 aa13.72□□□□□ -0.21
TARDBP-203ENST00000439080 FBN1P35555 2871 aaKnown RBP13.72□□□□□ -0.21
TARDBP-203ENST00000439080 TOR1AO14656 332 aa13.71□□□□□ -0.21
TARDBP-203ENST00000439080 HOXA3O43365 443 aaPredicted RBP13.71□□□□□ -0.21
TARDBP-203ENST00000439080 IGLV1-47P01700 117 aa13.71□□□□□ -0.21
TARDBP-203ENST00000439080 PAX6P26367 422 aa13.71□□□□□ -0.21
TARDBP-203ENST00000439080 LOXL3P58215 753 aa13.71□□□□□ -0.21
TARDBP-203ENST00000439080 HLA-DRB3P79483 266 aa13.71□□□□□ -0.21
TARDBP-203ENST00000439080 ARFRP1Q13795 201 aa13.71□□□□□ -0.21
TARDBP-203ENST00000439080 ARL6IP1Q15041 203 aa13.71□□□□□ -0.21
TARDBP-203ENST00000439080 HLA-DRB5Q30154 266 aa13.71□□□□□ -0.21
TARDBP-203ENST00000439080 FAM53AQ6NSI3 398 aaPredicted RBP13.71□□□□□ -0.21
TARDBP-203ENST00000439080 C5orf24Q7Z6I8 188 aa13.71□□□□□ -0.21
TARDBP-203ENST00000439080 BEND2Q8NDZ0 799 aa13.71□□□□□ -0.21
TARDBP-203ENST00000439080 OR52M1Q8NGK5 317 aa13.71□□□□□ -0.21
TARDBP-203ENST00000439080 OR9G1Q8NH87 305 aa13.71□□□□□ -0.21
TARDBP-203ENST00000439080 AP3S1Q92572 193 aa13.71□□□□□ -0.21
TARDBP-203ENST00000439080 ELF5Q9UKW6 265 aaPredicted RBP13.71□□□□□ -0.21
TARDBP-203ENST00000439080 CEPT1Q9Y6K0 416 aa13.71□□□□□ -0.21
TARDBP-203ENST00000439080 A0A0A6YYH2 397 aa13.71□□□□□ -0.22
TARDBP-203ENST00000439080 TMEM235A6NFC5 223 aa13.71□□□□□ -0.22
TARDBP-203ENST00000439080 A6NJ64 397 aa13.71□□□□□ -0.22
TARDBP-203ENST00000439080 FCGR3AP08637 254 aa13.71□□□□□ -0.22
TARDBP-203ENST00000439080 GSTP1P09211 210 aaKnown RBP13.71□□□□□ -0.22
TARDBP-203ENST00000439080 CDNFQ49AH0 187 aa13.71□□□□□ -0.22
TARDBP-203ENST00000439080 MINOS1Q5TGZ0 78 aa13.71□□□□□ -0.22
TARDBP-203ENST00000439080 OR10V1Q8NGI7 309 aa13.71□□□□□ -0.22
TARDBP-203ENST00000439080 ACOT12Q8WYK0 555 aa13.71□□□□□ -0.22
TARDBP-203ENST00000439080 ABCG5Q9H222 651 aa13.71□□□□□ -0.22
TARDBP-203ENST00000439080 MMP28Q9H239 520 aa13.71□□□□□ -0.22
TARDBP-203ENST00000439080 Q9N2K0 584 aa13.71□□□□□ -0.22
TARDBP-203ENST00000439080 COMMD3Q9UBI1 195 aa13.71□□□□□ -0.22
TARDBP-203ENST00000439080 GNG12Q9UBI6 72 aa13.71□□□□□ -0.22
TARDBP-203ENST00000439080 MGAT4AQ9UM21 535 aa13.71□□□□□ -0.22
TARDBP-203ENST00000439080 PSG11Q9UQ72 335 aa13.71□□□□□ -0.22
TARDBP-203ENST00000439080 MINOS1-NBL1R4GNA1 71 aa13.71□□□□□ -0.22
TARDBP-203ENST00000439080 CCDC160A6NGH7 325 aa13.7□□□□□ -0.22
TARDBP-203ENST00000439080 POM121CA8CG34 1229 aa13.7□□□□□ -0.22
TARDBP-203ENST00000439080 J3QR06 171 aa13.7□□□□□ -0.22
TARDBP-203ENST00000439080 IGHV4-59P01825 116 aa13.7□□□□□ -0.22
TARDBP-203ENST00000439080 ZNF182P17025 639 aaPredicted RBP13.7□□□□□ -0.22
TARDBP-203ENST00000439080 HTR1DP28221 377 aa13.7□□□□□ -0.22
TARDBP-203ENST00000439080 PRRX1P54821 245 aa13.7□□□□□ -0.22
TARDBP-203ENST00000439080 UBA52P62987 128 aaKnown RBP13.7□□□□□ -0.22
TARDBP-203ENST00000439080 GNMTQ14749 295 aa13.7□□□□□ -0.22
TARDBP-203ENST00000439080 SLC9A3R2Q15599 337 aa13.7□□□□□ -0.22
TARDBP-203ENST00000439080 ZNF260Q3ZCT1 412 aa13.7□□□□□ -0.22
TARDBP-203ENST00000439080 HACD4Q5VWC8 232 aa13.7□□□□□ -0.22
TARDBP-203ENST00000439080 DYNAPQ8N1N2 210 aa13.7□□□□□ -0.22
TARDBP-203ENST00000439080 NUDCD2Q8WVJ2 157 aa13.7□□□□□ -0.22
TARDBP-203ENST00000439080 SSMEM1Q8WWF3 244 aa13.7□□□□□ -0.22
TARDBP-203ENST00000439080 IL1F10Q8WWZ1 152 aa13.7□□□□□ -0.22
TARDBP-203ENST00000439080 GALMQ96C23 342 aa13.7□□□□□ -0.22
TARDBP-203ENST00000439080 RBM38Q9H0Z9 239 aaKnown RBP13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms